mRNA_F-serratus_M_contig855.19952.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.570e-43 Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGTFDP+D+MVKDGRWA+TEIPRV + N + +DVYGKLR+PWNVN R Y+TRG G++C +E++ WPTC HY+L +SDFYSW W+S+Y PHGPVH W
Sbjct: 383 WFGTFDPEDNMVKDGRWAFTEIPRVFENNPGL-IDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMEKAFPWPTCTSHYDLATGYSDFYSWVWQSLYDPHGPVHIW 487
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 159 bits (403), Expect = 2.280e-43 Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGT DP D VKDGRWAYTEIP++ K N+ + DVY KLR+PWNVN RPY+TRG GKMCD +++ WPTC+ HY+L +SDFYSW W S+Y PHGPVH W
Sbjct: 397 WFGTADPTDGQVKDGRWAYTEIPKM-KVNDPGAVEPDVYSKLRAPWNVNDRPYLTRGMGKMCDAKVDEWYPWPTCETHYDLATGYSDFYSWVWYSLYDPHGPVHIW 501
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 147 bits (371), Expect = 3.670e-39 Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGT DP D++VKDGRWA TEIP + G+ E L DVYG LRS W VNS PY+TRG GK+CDG + + AWP+C+ H+NLV ++ DFYSW ESMY PHGPVH W
Sbjct: 321 WFGTADPVDNVVKDGRWARTEIPAMDLGSPGE-LIPDVYGLLRSRWTVNSSPYLTRGLGKLCDGSVLDTYAWPSCEEHHNLVMDYDDFYSWVSESMYSPHGPVHTW 425
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 147 bits (372), Expect = 3.680e-39 Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGH-IEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFG+ DPDD++VKDGRWAYT++P + GN + L DVYG LRS WNVNS PY+TRG G +C+ + + Q WPTC+LHY + +SDFYSW W SMY PHGPVH W
Sbjct: 357 WFGSADPDDNIVKDGRWAYTKMPAMYPGNPGD-LNPDVYGLLRSRWNVNSSPYLTRGMGTLCNTYDVTQIYPWPTCELHYWMATEYSDFYSWVWTSMYAPHGPVHTW 462
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.840e-38 Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGT DP MV++GRWA IP++ +GN ++ DVY KLRSPWNVN R Y++RG G+MC E WPTC+ HYNL +F+DFYSW WES+Y PHGPVH W
Sbjct: 343 WFGTADPTTRMVQNGRWANVPIPKMREGNP-SKIEPDVYSKLRSPWNVNDRRYISRGMGQMCHARAETFYPWPTCESHYNLATSFTDFYSWVWESLYDPHGPVHIW 447
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 142 bits (359), Expect = 2.280e-37 Identity = 60/106 (56.60%), Postives = 75/106 (70.75%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGT+D DD+M+KD RWA+T IPR+ N E L DVY KLR+PWNVN R Y+TRG G MC + WPTC+ HY+L ++ DFYS+ W+S+Y PHGPVH W
Sbjct: 362 WFGTYDEDDNMLKDSRWAFTPIPRMEVNNPGE-LTPDVYLKLRAPWNVNDRAYLTRGMGNMCGIPTSNTYPWPTCETHYDLATSYKDFYSYVWDSLYDPHGPVHIW 466
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 140 bits (354), Expect = 2.440e-37 Identity = 63/106 (59.43%), Postives = 76/106 (71.70%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGT DP D++VKDGRWA TEIP + G+ E L DVYG LRS W VNS PY+TRG GK+CDG + WP+C+ H+NLV ++ DFYSW +SMY PH PVH W
Sbjct: 150 WFGTADPVDNVVKDGRWARTEIPAMDPGSPGE-LIPDVYGLLRSRWIVNSSPYLTRGLGKLCDGSVVDMYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHAPVHTW 254
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 142 bits (358), Expect = 2.480e-37 Identity = 62/106 (58.49%), Postives = 77/106 (72.64%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGT DP D++VKDGRWA TEIP + + E L DVYG LRS W +NS PY+TRG GK+CDG + + WP+C+ H+NLV ++ DFYSW +SMY PHGPVH W
Sbjct: 323 WFGTADPVDNVVKDGRWANTEIPAMDPSSPGE-LIPDVYGLLRSRWTINSSPYLTRGLGKLCDGSVVDTYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHGPVHTW 427
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.350e-36 Identity = 60/106 (56.60%), Postives = 71/106 (66.98%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFGT D DD MVKDGRWA +EIP+V + N L DVYGKLR+PWN N R Y+TRG G++C + +Q AWPTC HY L F FY W W+SM PH P+H W
Sbjct: 352 WFGTADLDDGMVKDGRWAKSEIPKV-RDNNPGGLEPDVYGKLRAPWNTNDRAYLTRGLGQLCQLNTDQLLAWPTCQTHYELTTGFHTFYDWVWDSMKAPHAPLHLW 456
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Match: D7G3A2_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A2_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.200e-31 Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 2
Query: 2 WFGTFDPDDSMVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKMCDGHIEQSCAWPTCDLHYNLVNNFSDFYSWSWESMYWPHGPVHFW 319
WFG D D VKDGRW +P V + +E L +DVYG++RSPWNVNSRPY+TRG G+MC + +WP C HY+L + F+ +Y ++W S Y PHGPVH W
Sbjct: 197 WFGGVDKKDYQVKDGRWGSVPVPIVDE-DERNFLGADVYGRMRSPWNVNSRPYLTRGLGEMCGLDSTEFYSWPGCSSHYDLQDKFNSYYGYTWWSQYGPHGPVHVW 301 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig855.19952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig855.19952.1 >prot_F-serratus_M_contig855.19952.1 ID=prot_F-serratus_M_contig855.19952.1|Name=mRNA_F-serratus_M_contig855.19952.1|organism=Fucus serratus male|type=polypeptide|length=96bp MVKDGRWAYTEIPRVPKGNEFEELRSDVYGKLRSPWNVNSRPYMTRGAGKback to top mRNA from alignment at F-serratus_M_contig855:328036..330465+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig855.19952.1 ID=mRNA_F-serratus_M_contig855.19952.1|Name=mRNA_F-serratus_M_contig855.19952.1|organism=Fucus serratus male|type=mRNA|length=2430bp|location=Sequence derived from alignment at F-serratus_M_contig855:328036..330465+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig855:328036..330465+ >mRNA_F-serratus_M_contig855.19952.1 ID=mRNA_F-serratus_M_contig855.19952.1|Name=mRNA_F-serratus_M_contig855.19952.1|organism=Fucus serratus male|type=CDS|length=576bp|location=Sequence derived from alignment at F-serratus_M_contig855:328036..330465+ (Fucus serratus male)back to top |