mRNA_F-serratus_M_contig855.19951.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: A0A6H5JY30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY30_9PHAE) HSP 1 Score: 144 bits (363), Expect = 2.050e-41 Identity = 70/121 (57.85%), Postives = 97/121 (80.17%), Query Frame = 3
Query: 9 MAPLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDETD--EIQASASGTEVAVVLTQLNEHVITLQEVNSAGLVIRHLEEIVMVKYVRREIRTLTDVE 365
+APL F ALN+YH+RDG+P Q YPWL+ +K+IEPHRET ++V++P +G +Y W +R +TD +++ASA G V + LT L+++VITL+EVNS G ++R L+E+VMVKYVRREIRTLTD E
Sbjct: 57 VAPLSFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTMSVSSPRDGYDYIWEVRSGDTDNTKVRASARGAVVLITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIRTLTDNE 177
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 149 bits (375), Expect = 2.590e-39 Identity = 73/121 (60.33%), Postives = 97/121 (80.17%), Query Frame = 3
Query: 9 MAPLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDETD--EIQASASGTEVAVVLTQLNEHVITLQEVNSAGLVIRHLEEIVMVKYVRREIRTLTDVE 365
+APL F ALN+YH+RDG+P Q YPWL+ +K+IEPHRET LTV++P +G +Y W +R +TD E++ASA G E + LT L+++VITL+EVNS G ++R L+E+VMVKYVRREIRTLTD E
Sbjct: 124 VAPLAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPRDGYDYIWEVRSGDTDDTEVRASARGAEALITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIRTLTDDE 244
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 145 bits (366), Expect = 4.890e-38 Identity = 71/121 (58.68%), Postives = 95/121 (78.51%), Query Frame = 3
Query: 9 MAPLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDETDE--IQASASGTEVAVVLTQLNEHVITLQEVNSAGLVIRHLEEIVMVKYVRREIRTLTDVE 365
+APL F ALN+YH+RDG+P Q YPWLK +K+IEPHRET L+V++P +G +Y W +R ETDE + A+A G E V LT L+++VIT++EV+ G ++R L+E+VMVKYVRREIRTLTD E
Sbjct: 118 VAPLSFQALNFYHIRDGKPAQDYPWLKGVKLIEPHRETTLSVSSPRDGHDYIWEVRAGETDEANLVATARGAEAVVTLTTLDDNVITVKEVHPDGHIVRRLDEVVMVKYVRREIRTLTDEE 238
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 140 bits (352), Expect = 3.730e-36 Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 3
Query: 9 MAPLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDETD--EIQASASGTEVAVVLTQLNEHVITLQEVNS-AGLVIRHLEEIVMVKYVRREIRTLTDVE 365
+APL F A N+YH+RDG+P YPWLK++K+IEPHRET TV++P +G EYRW +R + D +++A ASG E ++LT L++ +I L+EVN+ G+V R LEE VMVKYVRRE+RTLTD E
Sbjct: 126 LAPLSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPRDGFEYRWTVRGADADKDDLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELRTLTDEE 247
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 136 bits (343), Expect = 5.260e-35 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 3
Query: 9 MAPLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDETDE--IQASASGTEVAVVLTQLNEHVITLQEVNSAGLVIRHLEEIVMVKYVRREIRTLTDVE 365
+APL F ALN+YH+RDG+P Q Y WL+ +K+IEPHRET L V++P +G +Y W + ETDE + A+ASG E V LT L++ +IT++EV G ++R L+E+VMVKYVRREIRTLTD E
Sbjct: 90 VAPLSFEALNFYHIRDGKPAQDYTWLRDVKLIEPHRETTLLVSSPRDGYDYIWEVHAGETDEGDLIATASGAEAVVTLTVLDDSMITVKEVLPDGEIVRQLDEMVMVKYVRREIRTLTDEE 210
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 134 bits (337), Expect = 3.800e-34 Identity = 75/127 (59.06%), Postives = 89/127 (70.08%), Query Frame = 3
Query: 18 LEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDETDEIQASASGTEVA----------VVLTQLNEHVITLQEVNSA-GLVIRHLEEIVMVKYVRREIRTLTDVE 365
L F+ALN+YHVRDG+PGQ YPWLK K++EPHRET L V P EG EYRW +R T + S+SG E + VVLT L E++ITL+EVN A G V+R LEE VMVKYVRREIR+LTD E
Sbjct: 112 LAFTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPREGFEYRWDVRPTCTGDSCTSSSGGESSPIQAAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIRSLTDDE 238
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 134 bits (337), Expect = 4.160e-34 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 3
Query: 15 PLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDE------------------TDEIQASASGTEVAVVLTQLNEHVITLQEVNS-AGLVIRHLEEIVMVKYVRREIRTLTDVE 365
PL F+ALN+YHVRDG+P Q YPWLK +K+IEPHRET L V P +G EYRW + + T+E+ A+ASG E VV T L E+ ++L+EVNS G+V R L+E VMVKYVRREIRTLTD E
Sbjct: 132 PLSFTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPRDGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDE 267
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.540e-31 Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 3
Query: 15 PLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDET-DEIQASASGTEVAVVLT--QLNEHVITLQEVNSA-GLVIRHLEEIVMVKYVRREIRTLT 356
PL F A N+YHVRDG+P YPWL+ +K++EPHRET L+V +P EG EYRW++R + ++ +ASG E VVL L E+++TL+EV A G V R L+E VMVKYVRREIRTLT
Sbjct: 105 PLAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPREGFEYRWLIRGGSSASKVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIRTLT 222
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 124 bits (310), Expect = 1.890e-30 Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 3
Query: 18 LEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDET--DEIQASASGTEVAVVLTQLNEHVITLQEVNSAGLVIRHLEEIVMVKYVRREIRTLTDVE 365
L F A N+Y +RDG+P Q YPWLK +K+IEPHRET TV++P +G +YRW + E+ A+G E VVLT L+E+ + L+EV++ G V+R +E VMVKYVRREIRTLTD E
Sbjct: 166 LSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPRDGFDYRWRVFAGSAAEGELCTEATGPESTVVLTTLDENEVVLEEVDADGTVVRRRQEKVMVKYVRREIRTLTDDE 283
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 114 bits (285), Expect = 4.250e-27 Identity = 58/99 (58.59%), Postives = 77/99 (77.78%), Query Frame = 3
Query: 75 YPWLKKMKVIEPHRETILTVTNPSEGLEYRWILRVDETDEIQ--ASASGTEVAVVLTQLNEHVITLQEVNSAGLVIRHLEEIVMVKYVRREIRTLTDVE 365
YPWL+ +K+IEPHRETIL V++P +G +Y W +R ETDE A+ASG E V LT L+E++IT++EV+ G ++R L+E+VMVKYVRREIRTLTD E
Sbjct: 110 YPWLRDVKLIEPHRETILAVSSPRDGYDYIWEVRAGETDEADLIATASGAEAVVTLTVLDENMITVKEVHPDGEIVRQLDEMVMVKYVRREIRTLTDEE 208 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig855.19951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig855.19951.1 >prot_F-serratus_M_contig855.19951.1 ID=prot_F-serratus_M_contig855.19951.1|Name=mRNA_F-serratus_M_contig855.19951.1|organism=Fucus serratus male|type=polypeptide|length=119bp MAPLEFSALNYYHVRDGQPGQAYPWLKKMKVIEPHRETILTVTNPSEGLEback to top mRNA from alignment at F-serratus_M_contig855:309538..309902+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig855.19951.1 ID=mRNA_F-serratus_M_contig855.19951.1|Name=mRNA_F-serratus_M_contig855.19951.1|organism=Fucus serratus male|type=mRNA|length=365bp|location=Sequence derived from alignment at F-serratus_M_contig855:309538..309902+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig855:309538..309902+ >mRNA_F-serratus_M_contig855.19951.1 ID=mRNA_F-serratus_M_contig855.19951.1|Name=mRNA_F-serratus_M_contig855.19951.1|organism=Fucus serratus male|type=CDS|length=714bp|location=Sequence derived from alignment at F-serratus_M_contig855:309538..309902+ (Fucus serratus male)back to top |