mRNA_F-serratus_M_contig853.19929.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: A0A4D9D5Q8_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Q8_9STRA) HSP 1 Score: 199 bits (506), Expect = 6.770e-51 Identity = 135/348 (38.79%), Postives = 181/348 (52.01%), Query Frame = 1
Query: 1366 LRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTC---GEPPREEPIEDAKDAAETLGAKETG------VDHV----------RVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRELVLWRGEIRSARQRH 2352
L+ L+W G+P ++R+ VY +SGA KR+ G YY L GE G + ++R+ T GE R E + +G + G VD V +V ++IE DL R F + +N G + LRR+LRAY+ NP+VGYCQGMNFIAGLLL VSEETAFW L +CE + P + +LG R+D+ AL +L++ LP L+ + + LE+ WL+ FIN FP ALRILEIS EGSDV A LAFLR E E+L +D+ E+ + + QAGMYDAD LL Q +L R +R R H
Sbjct: 8 LKGLVWQGIPPDLRDPVYEWLSGASCKREALGVNYYHRLAAASEEENLGLGVIGGEEGDEGEEAWVCVTREREDAGVGMGGTGVHGGEGLRWECGAGSGAGGGYVGRRGAGGKGGMVVDVVMPELDAAWGAKVAQDIELDLGRAFADSDAAINTPEGRATLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRIRSNLRILRAWH 355
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: A0A4D9D5J7_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5J7_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.060e-49 Identity = 139/363 (38.29%), Postives = 185/363 (50.96%), Query Frame = 1
Query: 1321 SVDPVPGSAKHWGAHLRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTC---GEPPREEPIEDAKDAAETLGAKETG------VDHV----------RVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRELVLWRGEIRSARQRH 2352
S P PG L+ L+W G+P ++R+ VY +SGA KR+ G YY L GE G + ++R+ T GE R E + +G + G VD V +V ++IE DL R F + +N G + LRR+LRAY+ NP+VGYCQGMNFIAGLLL VSEETAFW L +CE + P + +LG R+D+ AL +L++ LP L+ + + LE+ WL+ FIN FP ALRILEIS EGSDV A LAFLR E E+L +D+ E+ + + QAGMYDAD LL Q +L R +R R H
Sbjct: 289 SYGPCPGVQSP--GDLKGLVWQGIPPDLRDPVYEWLSGASCKREALGVNYYHRLAAASEEENLGLGVIGGEEGDEGEEAWVCVTREREDAGVGMGGTGVHGGEGLRWECGAGSGAGGGYVGRRGAGGKGGMVVDVVMPELDAAWGAKVAQDIELDLGRAFADSDAAINTPEGRATLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRIRSNLRILRAWH 649
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: A0A5D6Y3V1_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3V1_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.390e-44 Identity = 116/337 (34.42%), Postives = 165/337 (48.96%), Query Frame = 1
Query: 1366 LRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTCGEPPREEPIEDAKDAAETLGAKETGVDHVRVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRELV-LWRGEIRSARQRHRIRIRQE 2373
+R+L +GVP RE VY++VSGA K+ G YYASLV + +AA+TL +R+IE D+ R F + T++ G +ALRR+LRAYS NP++GYCQG+NFI G L V EE AFWLL V+CE+L P Y+T +M ++D+ LK+L+ LP L T +VG+PLE+ +QWL+ F FP+ T RI + F EGS V ++A LR E +++ D V+ L A+ + DAD LL E + + + R +HR +R E
Sbjct: 296 VRQLARAGVPRSWRERVYMTVSGAREKQQSAGVDYYASLV-----------------------------------------------------EQSEAADTLA-----------FRQIELDIGRTFGHSGTKICTVAGRAALRRVLRAYSLRNPSIGYCQGLNFIVGFLTLAVEEEAAFWLLAVVCEDLFPGYYTPTMAETQTDMLVLKELIADELPELDAFTAEVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCVFTEGSAVVFPVIIAHLRRLERSLVRLGDFQAVLSALKDAENVLLDADSFLLDAGLEADRIDARRVEALRDKHRESVRDE 568
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: K3WPV8_GLOUD (Rab-GAP TBC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPV8_GLOUD) HSP 1 Score: 180 bits (456), Expect = 1.840e-43 Identity = 113/341 (33.14%), Postives = 164/341 (48.09%), Query Frame = 1
Query: 1366 LRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTCGEPPREEPIEDAKDAAETLGAKETGVDHVRVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRELV-LWRGEIRSARQRHRIRIRQEDGRV 2385
LR+L G+P RE VY+++SGA K+ G Y SLV Q G+ P +R+IE D++R F + T++ G + LRR+LRAYS NP++GYCQG+NFI G L V EE AFWLL VICE+L+P Y+T +M ++D+ LK+L+ LP L T DVG+PLE+ +QWL+ F FP+ T RI + F EGS A ++A LR E +++ ED V+ + A+ + DAD ++ +E + I + R++HR +R E R
Sbjct: 364 LRQLARGGIPRHWRERVYMNLSGAREKQQNAGSQDYKSLVE----------------------QSEGVDSAP------------------------------------------FRQIELDIDRTFGHSGTKICTEEGRAVLRRILRAYSIRNPSIGYCQGLNFIVGFLTLAVEEEAAFWLLAVICEDLYPGYYTPTMAETQTDMLVLKELIADELPALDAFTADVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFAEGSRFVFAVIIAHLRRLESTLIRLEDFQAVLSAMKDAENALLDADRFMVDAVQEADRIEESRITALREKHRESVRDEMNRA 640
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: A0A3F2RY14_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY14_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.690e-41 Identity = 106/334 (31.74%), Postives = 157/334 (47.01%), Query Frame = 1
Query: 1375 LIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTCGEPPREEPIEDAKDAAETLGAKETGVDHVRVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRELV-LWRGEIRSARQRHRIRIRQE 2373
L +G+P +RE Y+S+SGA K++ G YYA+LV E M+ DT +R+IE D++R F + T V +G + LRR+LRAYS NP+VGYCQG+NFI L+ + EE FWLL V CE+L+P Y+T +M ++D+ LK L+ LP+L T +VG+PLE+ +QWL+ F FP+ T R+ + F EGS ++A LR E +L + V+ ++ A+ D D + V +E + R I+ R R +R E
Sbjct: 112 LSRAGIPRHLRERAYMSLSGASEKQENEGAEYYANLV--------------------------------KEAETMETDT--------------------------------FRQIELDIDRTFGHSGTTVCTDSGRAQLRRILRAYSLRNPSVGYCQGLNFIVAFLMLIADEEAVFWLLSVFCEDLYPGYYTPTMADIQTDMLVLKQLIAEELPQLDEFTSEVGLPLELLGSQWLLCLFTTTFPSETVFRVFDCIFTEGSSFVFPAIMAHLRRLEPALLDLSEFHGVLSSIKDAENACIDGDSFMDAVCKEAEHISRSRIQKLRDEQRGSVRDE 381
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: A0A6A3P359_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P359_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.100e-40 Identity = 101/314 (32.17%), Postives = 151/314 (48.09%), Query Frame = 1
Query: 1366 LRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTCGEPPREEPIEDAKDAAETLGAKETGVDHVRVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRE 2307
L +L +G+P +RE Y+++SGA K+ GP YYA+LV AET+ +R+IE D++R F + T + G LRR+LRAYS HNP+VGYCQG+NFI L+ + EE FWLL V CE+L+P Y++ +M + D+ LK L+ LP+L T +VG+PLE+ +QWL+ F FP+ TA RI + F EGS ++A LR E +L ++ V+ ++ A++ D D+ + V +E
Sbjct: 309 LLQLARAGIPRHLRERAYMNLSGASEKQANAGPNYYANLVK--------------------------------------------------------VAETM--------ETETFRQIELDIDRTFGHSGTTICSEAGRDQLRRILRAYSLHNPSVGYCQGLNFIVAFLMLMADEEVVFWLLSVFCEDLYPGYYSPAMADIQRDMRVLKQLIAEELPQLDDFTAEVGLPLELLGSQWLLCLFTTTFPSETAFRIFDCIFTEGSFFVFPVIMAHLRQLEPTLLGLDEFHHVLSSIKDAESVCIDGDLFMAAVCKE 558
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: A0A2P4Y3Y3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3Y3_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.510e-40 Identity = 79/200 (39.50%), Postives = 122/200 (61.00%), Query Frame = 1
Query: 1708 WREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRE 2307
+R+IE D++R F + T V +G LRR+LRAYS NP+VGYCQG+NFI L+ + EE FW+L V CE+L+P+Y++ +M + D+ LK L+ LP+L T +VG+PLE+ +QWL+ F FP+ T RIL+ F EGS ++A LR E +L + +V+ ++ A+ D+D+ + V++E
Sbjct: 19 FRQIELDIDRTFGHSGTTVCSESGRDQLRRILRAYSLRNPSVGYCQGLNFIVAFLMLMADEENVFWILSVFCEDLYPDYYSPAMGDIQRDMLVLKQLIAEELPQLDEFTAEVGLPLELLGSQWLLCLFTTTFPSETVFRILDCIFTEGSSFVFPVIMAHLRRLEPALLGLNEFHDVLSSIKDAETACIDSDLFMAAVYKE 218
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: M4B6L1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6L1_HYAAE) HSP 1 Score: 168 bits (425), Expect = 1.070e-39 Identity = 106/343 (30.90%), Postives = 162/343 (47.23%), Query Frame = 1
Query: 1360 AHLRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTCGEPPREEPIEDAKDAAETLGAKETGVDHVRVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRELV-LWRGEIRSARQRHRIRIRQEDGRV 2385
A L +L +G+P +RE Y+ +SGA K++ GP YY LV +EE +E + +IE D+ R F + T ++ +G LRR+LRAYS NP+VGYCQG+N+I LL + EE FWLL V CE+L+P Y+ +M G + D+ LK L+ LP+L + +VG+PLE+ +QWL+ F FP+ T RI + F+EGS ++A LR E +L ++ V+ ++ A++ D D+ + V+RE + I+S R+ +R E RV
Sbjct: 327 ALLLQLARNGIPRHLRERAYMHLSGASRKQETAGPTYYVDLVK----------------------------------------------QEETLE------------------TETFSQIELDIGRTFGHSGTIISSESGRGQLRRILRAYSLRNPSVGYCQGLNYIVAFLLLIADEEVVFWLLSVFCEDLYPGYYCPTMDGIQRDMLVLKQLIAEELPQLDEFSSEVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFMEGSSFVFPVIMAHLRRMEPTLLALDEFHGVLSSIKDAESACVDGDMFMAAVYREAEHVTASRIQSLREEQHGLVRSEMERV 605
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: D0MY33_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MY33_PHYIT) HSP 1 Score: 168 bits (425), Expect = 1.620e-39 Identity = 100/316 (31.65%), Postives = 153/316 (48.42%), Query Frame = 1
Query: 1360 AHLRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTCGEPPREEPIEDAKDAAETLGAKETGVDHVRVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRE 2307
A L +L +G+P +RE YV++SGAG K+ GP YYA LV E M+ +T +R+IE D++R F + T++ +G LRR+L+AYS NP+VGYCQG+NFI L+ + EE FWLL V CE+L+P Y++ +M + D+ LK L+ LP+L DVG+PLE+ +QWL+ F FP+ T RI + F EGS ++A LR E ++L + +V+ ++ ++ D D+ + V++E
Sbjct: 370 ALLIQLARAGIPRHLRECAYVNLSGAGEKQANAGPSYYAELV--------------------------------KKAETMETET--------------------------------FRQIELDIDRTFGHSGTKLCSESGRDQLRRILQAYSLRNPSVGYCQGLNFIVAFLMLIADEEVVFWLLSVFCEDLYPGYYSPAMSDIQRDMLVLKQLIAEELPQLDEFALDVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCIFTEGSSFVFPVIMAHLRRMEPKLLDLVEFHDVLSSIKDTESACIDGDLFMSAVFKE 621
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Match: A0A8K1FLZ0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLZ0_PYTOL) HSP 1 Score: 166 bits (420), Expect = 2.060e-39 Identity = 105/339 (30.97%), Postives = 156/339 (46.02%), Query Frame = 1
Query: 1360 AHLRELIWSGVPTEMREEVYVSVSGAGWKRDRYGPGYYASLVTGCLHLEDIAATNKGEMNASGRLQGLGLSRQPSHCERMKHDTCGEPPREEPIEDAKDAAETLGAKETGVDHVRVWREIEADLERVFINGRTRVNESTGVSALRRLLRAYSCHNPTVGYCQGMNFIAGLLLEVVSEETAFWLLGVICENLHPEYHTKSMLGARSDIAALKDLVQRVLPRLHGRTRDVGMPLEIKLTQWLIGGFINCFPANTALRILEISFLEGSDVYLATVLAFLRLHEVEILKGEDITEVVCTLDLAQAGMYDADILLLQVWRELVLWRGE-IRSARQRHRIRIRQE 2373
A ++ + G+P R+ VY+++SGA K++ YYASLV + ++ +R+IE D++R F + T++ G + LRR+L+ YS NP VGYCQG+NFI G L V EETAFWLL VICE+L P Y+ +M ++D+ +K L+ LP L T DVG+PLE+ +QWL+ F FP+ T RI + EGS ++A LR ++ ED V+ T+ A+ + DAD L+ +E E I S R+ H + +R E
Sbjct: 259 ATVQRMARRGIPRHWRQRVYMAMSGATEKKESEASDYYASLVAQLASRDSVS----------------------------------------------------------------FRQIELDIDRTFGHSHTKIATEAGRNVLRRVLKTYSMRNPAVGYCQGLNFIVGFLTLGVDEETAFWLLAVICEDLFPGYYIPTMADTQTDMLVIKQLIAEELPELDEFTSDVGLPLELLGSQWLLCLFTTTFPSETVFRIFDCLMTEGSYFVFDVIMAHLRRIAPRLVGLEDFQTVLSTMKEAENTLLDADELIRLAVQETDRITAERITSLREEHSVSVRDE 533 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig853.19929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig853.19929.1 >prot_F-serratus_M_contig853.19929.1 ID=prot_F-serratus_M_contig853.19929.1|Name=mRNA_F-serratus_M_contig853.19929.1|organism=Fucus serratus male|type=polypeptide|length=807bp MMPYGEEHRRSTDTEVPSQRIFFRVLDLRVKRQISKGEHMRPYCVLRLGGback to top mRNA from alignment at F-serratus_M_contig853:121776..129626+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig853.19929.1 ID=mRNA_F-serratus_M_contig853.19929.1|Name=mRNA_F-serratus_M_contig853.19929.1|organism=Fucus serratus male|type=mRNA|length=7851bp|location=Sequence derived from alignment at F-serratus_M_contig853:121776..129626+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig853:121776..129626+ >mRNA_F-serratus_M_contig853.19929.1 ID=mRNA_F-serratus_M_contig853.19929.1|Name=mRNA_F-serratus_M_contig853.19929.1|organism=Fucus serratus male|type=CDS|length=4842bp|location=Sequence derived from alignment at F-serratus_M_contig853:121776..129626+ (Fucus serratus male)back to top |