mRNA_F-serratus_M_contig853.19926.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: D7G919_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G919_ECTSI) HSP 1 Score: 728 bits (1880), Expect = 4.370e-250 Identity = 456/872 (52.29%), Postives = 569/872 (65.25%), Query Frame = 1
Query: 1 QESRQKRDQFLNQMSSFLEGIENNNGASSSTGDLMPPEPPASFSSRVSGSFVMAPTAAKKIFPGPTK--GSSYAPREGAAGPPASSLMKEHEDVLVDPFATRPLPSFHQGRSSGTMQGVMV--EDDRPHPRGSLFDDIDIGPNLIEPEDVKGRAEVESSNWQPGANAQARNSVSLTHVTSYTAVFRS-THPFRLTPVSTKPRSRGKAKPARGLDLEEVRRRTSLXXXXXXXXXXXSSAQAFTPARPTAPQLPDTPPYFDADWQRQKTLSKPSIPSDEPPPHPLYAASAIDNPLLSSAVSGGTFDERGNYFNEELLRARA-RGQNISSSSSIPQDDGVAGQGAW-SGDALMDSAGNLISSARDGAKTLLRDAKAGVGAVGSNWQKGRRENGRNGQGLERSASSRLTRKKRESDPE---EFEATFGEGRLGFTLYREQDGPQKGKGVVCRVHPGSTADALGIRIADIVSGVNKRRYDSYNEVMEVLPKLPRPVLITFTRALKEDRPVSTFVAAANPSSIPSMAEQQQQQGGGNPLEWLAKLNPFDKQRRETQEELGGEPDATQDGQV--SPQIGFLGEVFAQGIRGGVFSWSYYGTSDGVEVNSKDTYTEHVMRCQWGRTVDTMQ--SWMVARRYREFDALVWDLRHAYPDRKDSLPRLPPKEFFKMAPDVVERRAKGLKIFMTTIIRRFPDMLESSQLDRFLTISERISSMRNQAS-GKKNQELMYRNLGSHGSSSNVFAVSEPARDSSAGVGSSALVGTDYILDLMTSEGAYNLSRERKSDPVDVQVAENIIRELEEHLSQLSPTAHLLSDAKLYSLVERCQECWPRIKAAAAAALSGGMPETLLPRVLQCDEGMERAFEGLKADLTSRGYI 2571
QESR KRD FLNQM++FLEGIE S +T D++PPEPP S + S + P AA + G ++ R ++G ++S ED+ DPF + LP ++ G ++ M+ E+ HPRGSLFDD D+G PE+ + EV+S + +S L VTS F + TH R + + RSR K+KP+RGLDLEEVRRRTSL XXX YFD W Q+ P+ PS E PPHPL+AA + +PL S GNYFNE+LLRAR R GV G+G W SGDAL DSAG+ +++ARDGAKTLL+DAKAGV AVG++WQ R ENG ++ + R R R+ + E EFE TFGEGR GFTL+RE GP+KG+GVVC+VH GSTA +LG+ D V+GVNK+RY++Y++VM VLPKLPRPVLITF+R +AA S+I + QGGGNPLEWLAKLNPFDK RR+ ++EL + D +V S + G GEVFA+G+RGGVFSWSYYGTSDG+E N++D YTEHVMRCQWG++V TM SWMVARRYREFDAL DLR AYPDRKD+LPRLPPKEFFKMAPDVVERRAKGL+++MTT+IRRFPDML SS LDRFLTISER+S+++ A+ G + L YRNLG++GSSSNVF P SS+ LVGTDYIL+LM+SE A+ LS+ R+S PVDV AE+++ ELE+H+S++ P AHLLSD KLY LV RCQ+ WP +K+AAAAA SG TLLPR++QCDEGME AF L+A LTSRGYI
Sbjct: 13 QESRHKRDDFLNQMTNFLEGIE-----SKTTADVIPPEPPVSLARAESYTSTAFPPAATESVSGKQVLWANAVQDRRASSGAASASSSLMQEDLFEDPFVRKELPP-ETAKAHGGLRSAMISAENTVSHPRGSLFDDDDVGLADTGPEEEED--EVQSGRHGSVLTSDPVDSP-LQRVTSSPLPFSAPTHDTRAS--LAQGRSRSKSKPSRGLDLEEVRRRTSLLSGGSRAPXXXXXXXXXXXXXXXXXXXXXXS-YFDGGWGPQQ----PAAPSGEVPPHPLHAAPS--DPLFSG----------GNYFNEDLLRARGERSSRTGLDEGHTSGRGV-GRGGWASGDALKDSAGSFLNTARDGAKTLLQDAKAGVDAVGASWQSSRDENG------QQRVAGRPPRGSRQEEVEGEREFEVTFGEGRFGFTLFREDAGPKKGQGVVCKVHTGSTAHSLGVSEGDTVTGVNKQRYETYDDVMAVLPKLPRPVLITFSRGGTGYSAEGRSMAARRASTI-----SEDVQGGGNPLEWLAKLNPFDKGRRDEEDELRASGKSQVDSKVLASREHGPTGEVFARGVRGGVFSWSYYGTSDGIESNTRDAYTEHVMRCQWGKSVHTMHEMSWMVARRYREFDALDLDLRDAYPDRKDALPRLPPKEFFKMAPDVVERRAKGLELYMTTLIRRFPDMLASSHLDRFLTISERLSTLQTPAAVGSSSPRLSYRNLGANGSSSNVFPAHSPESRSSS------LVGTDYILNLMSSEEAWRLSQARRSSPVDVAFAEDLVHELEDHISRIPPDAHLLSDEKLYGLVARCQKAWPGLKSAAAAA-SGASSPTLLPRIVQCDEGMECAFGNLRALLTSRGYI 837
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: A0A835YRV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV1_9STRA) HSP 1 Score: 308 bits (788), Expect = 2.330e-88 Identity = 249/700 (35.57%), Postives = 336/700 (48.00%), Query Frame = 1
Query: 577 STKPRSRGKAKPARGLDLEEVRRRTSLXXXXXXXXXXXSSAQAFT----PARPTAPQLPDTPPYFDADWQRQKTLSKPSIPSDEPPPHPLYAASAIDNPLLSSAVSGGTFDERGNYFNEELLRAR-ARGQNISSSSSIPQDDGVAGQGAWSGDALMDSAGNLISSARDGAKTLLRDAKAGVGAVGSNWQKGRRENGRNGQGLERSASSRLTRKKRESDPEEFEATFGEGRLGFTLYREQDGPQKGKGVVCRVHPGSTADALGIRIADIVSGVNKRRYDSYNEVMEVLPKLPRPVLITFTRALKEDRPVSTFVAAANPSSIPSMAEQQQQQGGGNPLE--------WLAKLNPFDKQRRETQEELGGEPDA----TQDGQVSPQIGFLGEVFAQGIRGGVFSWSYYGTSDGVE-----VNSKDTYTEHVMRCQWGRTVDTMQSWMVARRYREFDALVWDLRHAYPDRKDSLPRLPPKEFFKMAPDVVERRAKGLKIFMTTIIRRFPDMLESSQLDRFLTISERISSMRNQASGKKNQE-----------LMYRNLGSHGSSSNVFA---VSEPARDSSAGVGSSALVGTDYILDLMTSEGAYNLSRERKS-----DPVDVQVAENIIRELEEHLSQ----LSPTAHLLSDAKLYSLVERCQECWPRIKAAAAAALSGGMPETLLPRVLQCDEGMERAFEGL 2541
S P + GK K +DLEE RRRT+L SS A AP + PP ++P +P+D PL A G+ D G+YFNE+LLR R AR S+ ++ A AW A++ AG+++S+A+ GAK+LL+ A NG G + ++ TFG+GRLGFT+ + + +G GVVC+V P STA + G+ D V +N+RR SY+EVM VLP +PRPVL+TF A P P +A Q GG E WL L+PF +R + L G+ + QD Q + F G V GVFSWS YGTSDG E +++ DTYTE+VMRCQWG + M WMVARRYREFDAL DLR +P KDS P LPPKE FK + +VV RR GL+ +MT +I PD+L Q++RFL I ERI++++ Q ++ +L + SS + A + S VG +ALVGTDY+L+LMT+ AY+L R R +Q E +R L + + ++ A L DA+L+ L E CQ+ WP +KA AA A +LP VLQCDE +ER L
Sbjct: 197 SAAPAAAGKPKSRGSIDLEEARRRTALLMGDGAYSRRSSSGSVGAGMAGAAAEAAPVRREPPPL----------ATRPQMPAD-----PLGA---------------GSSDAGGSYFNEDLLRQRQARAATYGSTYPYDANEQDASS-AWDTGAILGRAGSMVSAAKSGAKSLLQRA--------------------NGYG------NAXXXXXXXXXXGSYDVTFGDGRLGFTMLKSE----QGLGVVCKVQPDSTAASAGVSPGDTVVAINRRRMSSYDEVMSVLPSMPRPVLVTF----------------AKPDGEPQLANGQAALTGGGAWEADGQGSKGWLGNLDPFKSGKRRSSAGLSGDNASWRVENQDLQFR-RPDFHGVVVH--AHNGVFSWSLYGTSDGSEAPGARLSTGDTYTEYVMRCQWGPDLQHMSPWMVARRYREFDALDKDLREVFPHLKDSFPSLPPKELFKTSQEVVSRRRVGLEQYMTFLIGNCPDVLCCPQMNRFLGIDERIAAIKGQGGLRRGSSGAPAXXXXXXXXXVPSLSASTSSGPLQARLLLCATEASSRITVGCAALVGTDYLLNLMTAGEAYDLMRARAGALRPLTRAGLQAVEEAVRRLRQRVDDWGRGVAVVADPLHDAELHGLAEICQQSWPALKATAARADDTPEGMDMLPSVLQCDEDIERLLAWL 816
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: A0A7S2BPG0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BPG0_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.310e-25 Identity = 84/284 (29.58%), Postives = 138/284 (48.59%), Query Frame = 1
Query: 1714 GGVFSWSYYGTSDGVEVNSKDTYTEHVMRCQWGRTVDTMQSWMVARRYREFDALVWDLRHAYPDRKDSLPRLPPKEFF-KMAPDVVERRAKGLKIFMTTII--RRFPDMLESSQLDRFLTISERISSMRNQASGKKNQELMYRNLGSHGSSSNVFAVSEPARDSSAGVGSSALVGTDYILDLMTSEGAYNLSRERKSDPVDVQVAENIIRELEEHLSQLSPTAHLLSDAKLYSLVERCQECWPRIKAAAAAALSGGMPETLLPRVLQCDEGMERAFEGLKADLT 2556
GG+F + YGT+D +++ + TYTE+V+RCQWG + +M+ W+VARRYREF AL L++A+PD + LP LP K F ++ D V R + L+ ++T ++ + ++S+Q+D FL IS+RI ++ N + +++ ++ P + ++ D + A N S ER ++ + E + L L P + K L CQ+ WP++KA G +L+PR LQ DE + R L T
Sbjct: 12 GGIFGCTMYGTADALDMETGQTYTEYVLRCQWGESFPSMKPWIVARRYREFCALDSSLKYAFPDLAEYLPGLPRKHIFGTLSSDTVNVRQRQLEDYLTRLMTDEKLAVTMKSAQIDEFLMISQRIKLIQETGQSVPNMQ----------DDTDIISI-PPGK----------IIQLLSAADAQEAFEANNYS-ERPLTSAELALLEADVLTLSNLTENLDPKVPISRGTK--KLASLCQKEWPKLKATGCV---DGHNSSLVPRALQLDEDLTRIASTLSTIAT 268
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: A0A7S3K4V4_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4V4_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.200e-24 Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1684 LGEVFAQGIRGGVFSWSYYGTSDGVEVNSKDTYTEHVMRCQWGRTVDTMQSWMVARRYREFDALVWDLRHAYPDRKDSLPRLPPK-EFFKMAPDVVERRAKGLKIFMTTIIRRFPDMLESSQLDRFLTISERIS 2082
LG+ A GGVFS S YGT++ + + + YTE+++RCQ+G+T +TM+ WMVARR+REF A+ +LR A PD LP LP FF M+P VVE+R GL+ ++ T+I FP L+S QLD FL I RI+
Sbjct: 608 LGKAAATYAFGGVFSCSMYGTAEAKDFETGEPYTEYIIRCQFGKTFETMKPWMVARRFREFVAVDANLRAALPDLAPHLPPLPSSFVFFAMSPQVVEQRQHGLEQYLKTLITEFPATLKSPQLDEFLCIHSRIA 741
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: A0A482RWR0_9ARCH (PX domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWR0_9ARCH) HSP 1 Score: 115 bits (288), Expect = 1.370e-23 Identity = 56/127 (44.09%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 1717 GVFSWSYYGTSDGVEVNSKDTYTEHVMRCQWGRTVDTMQSWMVARRYREFDALVWDLRHAYPDRKDSLPRLPPKEFF-KMAPDVVERRAKGLKIFMTTIIRRFPDMLESSQLDRFLTISERISSMRN 2094
G+FSW YG+++ ++ +TYTE++MRCQWG T D +Q W+VA RY+EFD L +L+ +P + ++P+LP K+F KM VV RR L+ +M+ I++ P +L S ++ FL I+ERIS++RN
Sbjct: 204 GIFSWQMYGSAEAIDEFG-NTYTEYLMRCQWGSTFDNLQPWIVAHRYKEFDRLDQELKRFFPALEKNMPKLPKKDFLNKMESGVVARRRAVLEDYMSKIVQSMPTILRSDLMNNFLRINERISTIRN 329
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: A0A8J2SH72_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH72_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 3.160e-17 Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 1714 GGVFSWSYYGTSDGVEVNSKDTYTEHVMRCQWGRTVDTMQSWMVARRYREFDALVWDLRHAYPDRKDSLPRLPPKE-FFKMAPDVVERRAKGLKIFMTTIIRRFPDMLESSQLDRFLTISERI 2079
GGVFS YG+S+ + + + YTE+V+RC+WGR+VD + W+V RR+ EF AL LR AYP + P LP F + P VVE R GL ++ ++R P++L++ +D FL +S RI
Sbjct: 264 GGVFSCEMYGSSEQRDQHD-ELYTEYVLRCRWGRSVDATRPWLVGRRFSEFAALDASLRGAYPSL--TFPALPSSYVLFPLDPAVVEEREAGLGAYLGALLRDLPELLKTRHVDEFLQVSARI 383
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: A0A5A8EFV6_CAFRO (PX domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFV6_CAFRO) HSP 1 Score: 76.6 bits (187), Expect = 1.700e-10 Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 1777 TYTEHVMRCQWGRTVDTMQSWMVARRYREFDALVWDLRH------AYPDRKDSLPRLPPKEFF--KMAPDVVERRAKGLKIFMTTIIRRFPDMLESSQLDRFLTISERISSMRN 2094
T+TE+V+RC+W R +SW+VARRY EFDAL L+ A ++PRLP K F VVE R KGL ++ +++RFP + + ++DRFLT++ R++ + N
Sbjct: 208 TFTEYVLRCRWERA-SASRSWLVARRYSEFDALALVLQPRLEASAAAAGPAVAVPRLPGKSLFGWSTGASVVESRRKGLAQWLNDVLQRFPWVTDLDEVDRFLTLTPRLADLFN 320
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Match: A0A7R9U3N9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3N9_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.000e-7 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 1234 TFGEGRLGFTLYREQDGPQKGKGVVCRVHPGSTADALGIRIADIVSGVNKRRYDSYNEVMEVLPKLPRPVLITFTRALKED 1476
+FGEGR+G L R ++ + V + P AD G+R+ D V GVN +R Y+EVME++ +L RPV ITF R + D
Sbjct: 168 SFGEGRMGLRLTRAKNM----RATVSMITPNGNADVQGLRVGDFVCGVNGKRVGDYDEVMELVQRLKRPVSITFRRITRCD 244 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig853.19926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig853.19926.1 >prot_F-serratus_M_contig853.19926.1 ID=prot_F-serratus_M_contig853.19926.1|Name=mRNA_F-serratus_M_contig853.19926.1|organism=Fucus serratus male|type=polypeptide|length=858bp QESRQKRDQFLNQMSSFLEGIENNNGASSSTGDLMPPEPPASFSSRVSGSback to top mRNA from alignment at F-serratus_M_contig853:101672..117577+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig853.19926.1 ID=mRNA_F-serratus_M_contig853.19926.1|Name=mRNA_F-serratus_M_contig853.19926.1|organism=Fucus serratus male|type=mRNA|length=15906bp|location=Sequence derived from alignment at F-serratus_M_contig853:101672..117577+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig853:101672..117577+ >mRNA_F-serratus_M_contig853.19926.1 ID=mRNA_F-serratus_M_contig853.19926.1|Name=mRNA_F-serratus_M_contig853.19926.1|organism=Fucus serratus male|type=CDS|length=5148bp|location=Sequence derived from alignment at F-serratus_M_contig853:101672..117577+ (Fucus serratus male)back to top |