mRNA_F-serratus_M_contig851.19909.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE) HSP 1 Score: 362 bits (930), Expect = 5.430e-120 Identity = 198/398 (49.75%), Postives = 258/398 (64.82%), Query Frame = 1
Query: 22 KVWRKLRQLRD--LPPLPRDGGS----------YEDFRSFVACNEVRSTLGPCADLPRIQLLAVFACLASGTRLEELVQLLGASRQ--HPALQYACLLALHGIAELSDRRVDMLTHRELVHELLTTISSPQQRVITPSSVGAGSPQADFVNPAAVSVSVMTGLFSSNGTLEPEYAKLWVDLGAVQALIYCLESHKTFDRGDPVATDLPLCFFLISTFLFAGAADAISDSDKLSLGTAWLQTFVDAREWIAHEAGQVLASFYARPHWVGGVAHKIAQGLRVRALEAAQRCETE---DGS--WSVDNVHQLALTLQCTSARHPDECRG-TGRRCARAGCVHAE-----GGDGEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREACA 1140
K+W++LR+LRD PP+ + GS Y+DF +F ACNEVR +G + LPR Q LA+F L +G RL+EL++L SR HPALQYACL+ALHG+AELSDRR D+LT ++V EL ++SP+QR++TP+S GAG + VN AA +V+ +TGLF+SNG LEP YAKLWV+LGAV AL CLE+H FDR +PV+ DLPLCFFLI+T L AGAAD++S+ DKL LG AWL F++A WIA EA +LA FY RP+W+ + ++ + LR A+ AA+ CE E GS W +LAL L C +A + D GRRCA C + GG+ DE GD + KRCS+C +V YCSRECQ WK HR+AC+
Sbjct: 10 KIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGG--VEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAADLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGGELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKACS 404
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE) HSP 1 Score: 135 bits (341), Expect = 2.700e-32 Identity = 120/437 (27.46%), Postives = 180/437 (41.19%), Query Frame = 1
Query: 10 AVCDKVWRKLRQLRDLPPLPRDGGSYEDFRSFVACNEVRSTLGPCADLPRIQLLAVFACLASGTRLEELVQLLGASRQHPALQYACLLALHGIAELSDRRVDMLTHRELVHELLTTISSPQQRVITPSSVGAGSPQADFVNPAAVSVSVMTGLFSSNGTLEPEYAKLWVDLGAVQALIYCLESHKTFDRGDP-VATDLPLCFFLISTFLFAGAADAISDSDKLSLGTAWLQTFVDAREWIAHEAGQVLASFYARPHWVGGVAHKIAQGLRVRALEAAQRCETED---GSWSVDNVHQLALTLQCTSARHPD--------------------------ECRGTGRRCARAGCVHAEGGD-------------------------------GEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREAC 1137
A D +W ++R+LRD P+ +G Y D A + L P + R LL+++A +A G RL++L+ L S++HPAL+YACL L + +L +L +++ LLT + P+ I+P P D PAA + V++ L ++ G L+ +A+ WV LGA+ A+ LE F+ P TD P+ F+IS L + A A+S D+ + L +V+ R W+A AG L S + P G + LR +A++ A+ E G W+V V + D G G +G V GG G G V E KRC RCR+ YCS++CQ HWK H+ C
Sbjct: 19 ATADVLWDQIRKLRDCAPM--EGEFYPDEEPAKALAAISVALKPWSSASRETLLSMYAKIADGKRLDDLISLFLGSQEHPALRYACLELLGFVGQLKQTHRRLLCRMDVIKTLLTVLERPRIVPISPYC-----PSNDIC-PAAEAARVLSVLCAAEGGLKGAHAEEWVSLGALGAISSALE----FNAAIPDYFTDFPMVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGS-LGSLFEGP-LRGEALMRAPLELRNQAVKQAEDFIAEGFSLGGWAVRLVAAILSESPADGGGGGDGVAGNXXXXXXXXXXXXXXVTDSASATAGGVGPTSGVSGPVRPSGGKQVPSTRGHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEG--------FKRCGRCRTTVYCSKDCQVAHWKEKHKMEC 433
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: E1ZA90_CHLVA (MYND-type domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZA90_CHLVA) HSP 1 Score: 62.4 bits (150), Expect = 3.140e-7 Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 1
Query: 1036 HAARLKRCSRCRSVFYCSRECQSMHWKAGHREACALAPA 1152
HAA LK+CSRCR+V YC RECQ HW+ GH+ CA A A
Sbjct: 264 HAAELKKCSRCRAVAYCCRECQMAHWRRGHKRECAPAAA 302
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A7N0ZQW9_KALFE (MYND-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ZQW9_KALFE) HSP 1 Score: 62.0 bits (149), Expect = 4.220e-7 Identity = 42/128 (32.81%), Postives = 60/128 (46.88%), Query Frame = 1
Query: 784 GVAHKIAQGLRVRALEAAQRCETEDGSWSVDNVHQLALTLQCTSARHPDECRGTGRR---CARAGCVHAEGGDGEEWGQV-----DEDGDLG-HAARLKRCSRCRSVFYCSRECQSMHWKAGHREACA 1140
GV H +++G R+ + + S SV+ +HQ PD R C RA A GGDG+ +V D G + A + CS CRSV YCSR CQ++HW++ H++ CA
Sbjct: 182 GVRHDLSRGRRLFLRAGLRELQGSKLSGSVEALHQ------------PDAAHRFLREWFECGRASVAAARGGDGDRCVEVRLCSNDVCGRIETRANEFRSCSVCRSVSYCSRACQTLHWRSRHKDLCA 297
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A2J7ZU05_9CHLO (MYND-type domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZU05_9CHLO) HSP 1 Score: 63.2 bits (152), Expect = 4.710e-7 Identity = 41/139 (29.50%), Postives = 58/139 (41.73%), Query Frame = 1
Query: 730 HEAGQVLASFYARPH-WVGGVAHKIAQGLRVRALEAAQRCETEDGSWSVDNVHQLALTLQCTSARHPDECRGTGRRCARAGCVHAEGGDGEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREACAL 1143
+EAG+ L + A+ W G R ++ +R + +W +T P E R R C+ C + G D + DL RL+ C +C + YC R CQ HW+AGHREACAL
Sbjct: 784 NEAGEALEALAAQLEAWEAGG----GDSCNARGKKSKKRRQRVLAAWGRLEAESPEMTAIAAVLLPPAEARALLRTCSYPACANLAG---------DSEADL----RLQSCGKCAAAAYCCRACQVAHWRAGHREACAL 905
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A835Y3J4_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3J4_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 2.090e-6 Identity = 40/120 (33.33%), Postives = 51/120 (42.50%), Query Frame = 1
Query: 814 RVRALEAA-------QRCETEDGSWSVDNVHQLALTLQCTSARHPDECRGTGRRCARAGCVHAEGGDGEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREACALAPA 1152
RV+AL AA + + W V + TL P R C+ C + G D + L RL+RC RC S YC RECQ+ HW+AGH+EAC A A
Sbjct: 1048 RVKALVAALQRRGGAEELRRLESQWEVP----VGDTLAWAFVAPPTAARALRPACSNPACANLAG---------DSEAGL----RLQRCGRCGSAAYCCRECQTAHWRAGHKEACGRAAA 1150
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A2J8AC05_9CHLO (MYND-type domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AC05_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 2.180e-6 Identity = 35/110 (31.82%), Postives = 47/110 (42.73%), Query Frame = 1
Query: 814 RVRALEAAQRCETEDGSWSVDNVHQLALTLQCTSARHPDECRGTGRRCARAGCVHAEGGDGEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREACAL 1143
+ R E + E +W + +T P E R R C+ C + G D + DL RL+ C +C + YC R CQ HW+AGHREACAL
Sbjct: 1471 KARGEEGEESRERALAAWGQLQAARPNMTAIAAVLLPPAEARALLRTCSYPACANLAG---------DSEADL----RLQSCGKCAAAAYCCRACQVAHWRAGHREACAL 1567
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A836C0Q2_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C0Q2_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 4.500e-6 Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 955 CARAGCVHAEGGDGEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREACA 1140
CA CV+ EG D + DL +L++C RC V+YC RECQ HWKAGH++AC+
Sbjct: 850 CANPACVNLEG---------DSEADL----KLQQCGRCGRVWYCCRECQVAHWKAGHKKACS 898
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A2J8ABY7_9CHLO (MYND-type domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ABY7_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 4.940e-6 Identity = 46/145 (31.72%), Postives = 67/145 (46.21%), Query Frame = 1
Query: 730 HEAGQVLASFYAR-PHWVGG------VAHKIAQGLRVRALEAAQRCETEDGSWSVDNVHQLALTLQCTSARHPDECRGTGRRCARAGCVHAEGGDGEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREACAL 1143
+EAG+ L + + W G V + + R RAL A +R + +W ++ ++A L P E R R C+ C + G D + DL RL+ C++C + YC R CQ HW+AGHREACAL
Sbjct: 1217 NEAGEALEALAVQLGAWEAGGGNPCKVRGEEGEECRERALAAWRRLQA---TWP--DMARIAAALL-----PPAEARALLRTCSYPACSNLAG---------DSEADL----RLQSCAKCAAAAYCCRACQVAHWRAGHREACAL 1338
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Match: A0A2J7ZPY8_9CHLO (MYND-type domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZPY8_9CHLO) HSP 1 Score: 59.3 bits (142), Expect = 6.790e-6 Identity = 30/73 (41.10%), Postives = 38/73 (52.05%), Query Frame = 1
Query: 925 PDECRGTGRRCARAGCVHAEGGDGEEWGQVDEDGDLGHAARLKRCSRCRSVFYCSRECQSMHWKAGHREACAL 1143
P E R R C+ C + G D + DL RL+ C++C + YC R CQ HW+AGHREACAL
Sbjct: 546 PAEARALLRTCSYPACANLAG---------DSEADL----RLQSCAKCAAAAYCCRACQVAHWRAGHREACAL 605 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig851.19909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig851.19909.1 >prot_F-serratus_M_contig851.19909.1 ID=prot_F-serratus_M_contig851.19909.1|Name=mRNA_F-serratus_M_contig851.19909.1|organism=Fucus serratus male|type=polypeptide|length=385bp MAEAVCDKVWRKLRQLRDLPPLPRDGGSYEDFRSFVACNEVRSTLGPCADback to top mRNA from alignment at F-serratus_M_contig851:344294..345448+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig851.19909.1 ID=mRNA_F-serratus_M_contig851.19909.1|Name=mRNA_F-serratus_M_contig851.19909.1|organism=Fucus serratus male|type=mRNA|length=1155bp|location=Sequence derived from alignment at F-serratus_M_contig851:344294..345448+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig851:344294..345448+ >mRNA_F-serratus_M_contig851.19909.1 ID=mRNA_F-serratus_M_contig851.19909.1|Name=mRNA_F-serratus_M_contig851.19909.1|organism=Fucus serratus male|type=CDS|length=2310bp|location=Sequence derived from alignment at F-serratus_M_contig851:344294..345448+ (Fucus serratus male)back to top |