mRNA_F-serratus_M_contig846.19841.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: D7FUK2_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK2_ECTSI) HSP 1 Score: 128 bits (321), Expect = 2.780e-32 Identity = 67/102 (65.69%), Postives = 76/102 (74.51%), Query Frame = 2
Query: 2 ALAPVRRLNDHLSKRARHLLEERTRRLGDV---GGEGRSATGDSGSCSFNVALINRMEPSEARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVTEPE 298
AL V LN+ L +R+ LL R R G GGEG + GSC FNVALINRMEPS+ RPDLKLEPTFG+DRCSVSWHADSCLEH+S+IAVYHVT+PE
Sbjct: 177 ALRRVGLLNNKLKERSLRLLRARGGRKGKARREGGEGN----EFGSCEFNVALINRMEPSDDRPDLKLEPTFGQDRCSVSWHADSCLEHYSSIAVYHVTDPE 274
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: A0A836C862_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C862_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.110e-20 Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 2
Query: 137 FNVALINRMEPSEARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVTEPE 298
F VALINRMEP+ RPDLK EP +GR+R SVSWHADSCLEHFSTIAVYH T+ +
Sbjct: 205 FTVALINRMEPASLRPDLKAEPLYGRERLSVSWHADSCLEHFSTIAVYHQTDAD 258
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: D7FUI9_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUI9_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 7.150e-20 Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 2
Query: 5 LAPVRRLNDHLSKRARHLLEERTRRLGDVGGEGRSATGDSGSCSFNVALINRMEPSEARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVTEP 295
L V L++ + RA +L+E R G G+ GSC+FN+ LINRME S A+ DLK +P F +CSVSWHADSCL+ FSTI VYH T+P
Sbjct: 259 LRKVGDLSEWMRLRAGAMLKEEVREAG----------GERGSCAFNLTLINRMECSGAKRDLKPDPLFSMGKCSVSWHADSCLQDFSTIGVYHCTDP 345
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: A0A7S2RU45_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU45_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.570e-17 Identity = 49/100 (49.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query: 2 ALAPVRRLNDHLSKRARHLL--EERTRRLGDVGGEGRSATGDSGSCSFNVALINRMEPSEARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVTEP 295
AL + RLN+ L RA LL E++ R+L VG FN+ LIN+MEP++ L+ EP FG +CSVSWHADS L+ FSTIAVYH TEP
Sbjct: 142 ALQALYRLNEELISRAEGLLATEQQRRQLPAVG-----------PTRFNLTLINQMEPTQVEKALRDEPLFGMGKCSVSWHADSGLQDFSTIAVYHSTEP 230
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: A0A835ZL97_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL97_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.360e-14 Identity = 52/105 (49.52%), Postives = 58/105 (55.24%), Query Frame = 2
Query: 2 ALAPVRRLNDHLSKRARHLLEER--TRRLGDVGGEGRSATGDS-GSCSFNVALINRMEPSEA----RPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVTEP 295
AL + LN L +RA E T RL +A G S GS FN+ LINRMEPS LK EP FG + SVSWHADSCLE +STI VYHVT P
Sbjct: 122 ALRQLCTLNAWLRRRAERACAEEGITARL--------AAAGHSPGSFDFNLTLINRMEPSGHGDGYHAKLKPEPIFGMGKASVSWHADSCLEDYSTIGVYHVTTP 218
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: A0A7S2XRF9_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRF9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.470e-14 Identity = 45/94 (47.87%), Postives = 55/94 (58.51%), Query Frame = 2
Query: 2 ALAPVRRLNDHLSKRARHLLEERTRRLGDVGGEGRSATGDSGSCSFNVALINRMEPSEARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYH 283
A+ V LN+ L+ R+ H L E ++ GR A G F+V LINRME + DLK E T G RCSVSWHADS LE++STI VYH
Sbjct: 205 AVTTVSDLNETLTHRSSHHLSELDKKR-----RGRGAEPTKGRAGFDVTLINRMEGTS---DLKSEVTTGEGRCSVSWHADSSLENYSTIGVYH 290
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: A0A7S3Q6H3_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q6H3_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.700e-14 Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 2
Query: 2 ALAPVRRLNDHLSKRARHLLE--ERTRRLGDVGGEGRSATGDSGSCSFNVALINRMEPSEARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYH 283
AL + LN +L+ R + L+ E+TR+ + S G ++VALINRM + PDLK EPT G+ +CSVSWHADS LEHFS+IAVYH
Sbjct: 218 ALKAISTLNQNLTGRTQTHLKGLEQTRQRRNYS----SHPCIKGRAKYDVALINRMTNA---PDLKKEPTMGKGKCSVSWHADSSLEHFSSIAVYH 306
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: C1E7Q2_MICCC (Alpha-ketoglutarate-dependent dioxygenase FTO n=3 Tax=Micromonas TaxID=38832 RepID=C1E7Q2_MICCC) HSP 1 Score: 74.7 bits (182), Expect = 1.560e-13 Identity = 48/98 (48.98%), Postives = 57/98 (58.16%), Query Frame = 2
Query: 5 LAPVRRLNDHLSKRARHLL-EERTRRL-GDVGGEGRSATGDSGSCSFNVALINRMEPSEARP-DLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVT 289
L VRRLND + +R+R LL R R+ GDV +GSC FNV LIN MEP LK E FG + SVSWH+DS L+ ST+AVYH T
Sbjct: 178 LRVVRRLNDAMKRRSRALLTRHRDARVPGDV----------TGSCEFNVTLINLMEPERKESVALKDEGQFGMGKASVSWHSDSSLQDTSTVAVYHQT 265
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: A0A7S0SPB0_9CHLO (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SPB0_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 2.940e-13 Identity = 45/98 (45.92%), Postives = 54/98 (55.10%), Query Frame = 2
Query: 5 LAPVRRLNDHLSKRARHLLEERTRRLGDVGGEGRSATGDSGSCSFNVALINRMEPSE--ARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVTE 292
L VRRLN+ L R+R LL + + R +GSC FNV LIN MEP+ LK E +G SVSWHADS L+ ST+AVYH TE
Sbjct: 204 LRVVRRLNEALRARSRKLLRDSP--------DPRVGVEVTGSCDFNVTLINFMEPAHRCTAVPLKEESQYGMGNASVSWHADSSLQDMSTVAVYHQTE 293
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Match: A0A7S2EEX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EEX7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 4.300e-13 Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 2 ALAPVRRLNDHLSKRARHLLE---ERTRRLGDVGGEGRSATGDSGSCSFNVALINRMEPSEARPDLKLEPTFGRDRCSVSWHADSCLEHFSTIAVYHVTEP 295
A+ + LN L++R H LE ++ RR G G +F+VALIN+M + DLK EP + +C+VSWHADSCLEH+STIAVYH P
Sbjct: 47 AVQTIGDLNTTLTERTAHHLENLYDKPRRKGRR---------RRGRAAFDVALINKMIKTN---DLKDEPVTKQGKCTVSWHADSCLEHYSTIAVYHTIFP 135 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig846.19841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig846.19841.1 >prot_F-serratus_M_contig846.19841.1 ID=prot_F-serratus_M_contig846.19841.1|Name=mRNA_F-serratus_M_contig846.19841.1|organism=Fucus serratus male|type=polypeptide|length=101bp CPRACPPPERPPLEAREALARGKDPEARRCRRRGSKRDGRFRELQLQRGAback to top mRNA from alignment at F-serratus_M_contig846:357504..358068- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig846.19841.1 ID=mRNA_F-serratus_M_contig846.19841.1|Name=mRNA_F-serratus_M_contig846.19841.1|organism=Fucus serratus male|type=mRNA|length=565bp|location=Sequence derived from alignment at F-serratus_M_contig846:357504..358068- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig846:357504..358068- >mRNA_F-serratus_M_contig846.19841.1 ID=mRNA_F-serratus_M_contig846.19841.1|Name=mRNA_F-serratus_M_contig846.19841.1|organism=Fucus serratus male|type=CDS|length=606bp|location=Sequence derived from alignment at F-serratus_M_contig846:357504..358068- (Fucus serratus male)back to top |