mRNA_F-serratus_M_contig845.19826.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig845.19826.1
Unique NamemRNA_F-serratus_M_contig845.19826.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig845.19826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig845contigF-serratus_M_contig845:207734..209051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size501
Cds size501
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932488.1951382-CDS-F-serratus_M_contig845:207733..2078391622932488.1951382-CDS-F-serratus_M_contig845:207733..207839Fucus serratus maleCDSF-serratus_M_contig845 207734..207839 -
1690964333.203123-CDS-F-serratus_M_contig845:207733..2078391690964333.203123-CDS-F-serratus_M_contig845:207733..207839Fucus serratus maleCDSF-serratus_M_contig845 207734..207839 -
1622932488.2087712-CDS-F-serratus_M_contig845:208656..2090511622932488.2087712-CDS-F-serratus_M_contig845:208656..209051Fucus serratus maleCDSF-serratus_M_contig845 208657..209051 -
1690964333.2271037-CDS-F-serratus_M_contig845:208656..2090511690964333.2271037-CDS-F-serratus_M_contig845:208656..209051Fucus serratus maleCDSF-serratus_M_contig845 208657..209051 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig845.19826.1prot_F-serratus_M_contig845.19826.1Fucus serratus malepolypeptideF-serratus_M_contig845 207734..209051 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig845.19826.1

>prot_F-serratus_M_contig845.19826.1 ID=prot_F-serratus_M_contig845.19826.1|Name=mRNA_F-serratus_M_contig845.19826.1|organism=Fucus serratus male|type=polypeptide|length=167bp
QQRCISSSLHSSAVSFPRSTAALSPLHRSGEPPPPDTACLAGSTAAEHRA
GGGGWTREVTSGGIEAMNDRILDGSWGWKRVSCKLVAAARADRWLEREWP
RGAIGFIDVCDIGGGRGSRFDWKPRPDDGVVSAVTHSSHRGVVVGCGVVG
GKMERGYHGGRWKREIG
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mRNA from alignment at F-serratus_M_contig845:207734..209051-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig845.19826.1 ID=mRNA_F-serratus_M_contig845.19826.1|Name=mRNA_F-serratus_M_contig845.19826.1|organism=Fucus serratus male|type=mRNA|length=1318bp|location=Sequence derived from alignment at F-serratus_M_contig845:207734..209051- (Fucus serratus male)
CAGCAGCGCTGTATCTCTTCCTCGCTCCACAGCAGCGCCGTATCCTTTCC
TCGCTCCACAGCAGCGCTTTCTCCGCTCCACAGAAGCGGTGAGCCTCCGC
CTCCCGATACGGCGTGTTTGGCGGGGTCGACGGCGGCGGAACACCGGGCT
GGGGGTGGGGGGTGGACGCGCGAGGTTACGTCCGGCGGCATTGAAGCGAT
GAACGATCGGATTCTCGACGGGAGTTGGGGGTGGAAAAGAGTCTCGTGTA
AATTAGTTGCCGCGGCGCGTGCGGATCGGTGGCTGGAGAGGGAGTGGCCC
AGAGGAGCAATCGGCTTTATCGATGTTTGCGATATTGGCGGCGGGCGCGG
GAGCAGGTTTGACTGGAAACCGAGACCGGACGATGGGGTCGTGAGGCACG
TATTTGTGGGTATATCAGATAACGAATGACAGTAAGGGGACCAATTAGAG
GAGGCGGGGTTTTCAGGGGACCAAGGGTCAGGTTCGGTTATACTGCGTAC
TGTGGTGGTAGCTGTTGTTGGCCTTTTTCTTTGACGAGGTCAAGCGCGGA
CACATGCGCATACCTCTAGAGATGGAGTGTACCGCAGTTGCTCCGAAATA
AATAGATTGGTATGTATACAACTGAAAGTGCGTAGCGTCAGGACCCCAGA
AATGTGTACTTCCGTGTGTGTTTTATAACGCGTTTGACCCCCCCCCCCCC
CCCCCGTATCTAGAGTAAAGCAATCGACCGTAATATTGCACGTACGAGAG
GTAGAGGGTAACGCAAACGTCTCGAAGTTATATCTCGCGAGAGAGTTGGG
GGGGGCGGGGGCGGGGGGTAATTTAGCCCCCGTACCCCTCTCTCATGTCG
TGTAAGAAGAGATTGTAAGATTGTGCCAAAACCGTAAGATATGTTGGGAC
AGCAGCATCAATCACCCAGCAGCTCAACTATTGAGTAGTTCGATGGTCGT
TTCAGTGCAGGAGACGTCGAGCGAGGTAGCTCCGACGAGTGCAATTGCCT
GTTTTTAGTTGAGCTGGTCACCTTCCCCTTGAAGATTCGGCACATCCACC
ACGAGTTCCAGGTGAAGATAAATCCCGGCCCTCCCTCGTCCGTCCGTCCG
TCTGTCCGTTTGTTTTTGTGTTCTTGCCTCTATTCCCCCGCTCCCCGTCG
TCGTCGTCTTCTGTCGCTCTGTGTGAACAACTGCTTCATCCCGCGGCGGT
CATGGCTCGCAGTGCTGTCACCCATTCCTCACACCGGGGAGTTGTAGTGG
GGTGTGGAGTTGTGGGTGGAAAGATGGAGCGGGGCTATCACGGGGGGAGA
TGGAAGAGAGAGATCGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig845:207734..209051-

>mRNA_F-serratus_M_contig845.19826.1 ID=mRNA_F-serratus_M_contig845.19826.1|Name=mRNA_F-serratus_M_contig845.19826.1|organism=Fucus serratus male|type=CDS|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig845:207734..209051- (Fucus serratus male)
CAGCAGCGCTGTATCTCTTCCTCGCTCCACAGCAGCGCCGTATCCTTTCC
TCGCTCCACAGCAGCGCTTTCTCCGCTCCACAGAAGCGGTGAGCCTCCGC
CTCCCGATACGGCGTGTTTGGCGGGGTCGACGGCGGCGGAACACCGGGCT
GGGGGTGGGGGGTGGACGCGCGAGGTTACGTCCGGCGGCATTGAAGCGAT
GAACGATCGGATTCTCGACGGGAGTTGGGGGTGGAAAAGAGTCTCGTGTA
AATTAGTTGCCGCGGCGCGTGCGGATCGGTGGCTGGAGAGGGAGTGGCCC
AGAGGAGCAATCGGCTTTATCGATGTTTGCGATATTGGCGGCGGGCGCGG
GAGCAGGTTTGACTGGAAACCGAGACCGGACGATGGGGTCGTGAGCAGCA
GCGCTGTATCTCTTCCTCGCTCCACAGCAGCGCCGTATCCTTTCCTCGCT
CCACAGCAGCGCTTTCTCCGCTCCACAGAAGCGGTGAGCCTCCGCCTCCC
GATACGGCGTGTTTGGCGGGGTCGACGGCGGCGGAACACCGGGCTGGGGG
TGGGGGGTGGACGCGCGAGGTTACGTCCGGCGGCATTGAAGCGATGAACG
ATCGGATTCTCGACGGGAGTTGGGGGTGGAAAAGAGTCTCGTGTAAATTA
GTTGCCGCGGCGCGTGCGGATCGGTGGCTGGAGAGGGAGTGGCCCAGAGG
AGCAATCGGCTTTATCGATGTTTGCGATATTGGCGGCGGGCGCGGGAGCA
GGTTTGACTGGAAACCGAGACCGGACGATGGGGTCGTGAGTGCTGTCACC
CATTCCTCACACCGGGGAGTTGTAGTGGGGTGTGGAGTTGTGGGTGGAAA
GATGGAGCGGGGCTATCACGGGGGGAGATGGAAGAGAGAGATCGGCTGCT
GTCACCCATTCCTCACACCGGGGAGTTGTAGTGGGGTGTGGAGTTGTGGG
TGGAAAGATGGAGCGGGGCTATCACGGGGGGAGATGGAAGAGAGAGATCG
GC
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