mRNA_F-serratus_M_contig845.19822.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig845.19822.1
Unique NamemRNA_F-serratus_M_contig845.19822.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: D8LKV1_ECTSI (Coiled-coil domain-containing protein 94 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV1_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 8.540e-140
Identity = 243/307 (79.15%), Postives = 265/307 (86.32%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGVKYRSRHKGFRTAEKSKMASIAGESIFGPNRVSREQAHRQALLVKAAKVGIKAHKMRLLEPDSEIPSA----ATTTRASSRGV 929
            MSTLAAARADNMYYPPEWRPE GGISKFQGS GHNQYEKYGKIRFELP HGWCLGCGRHIGRGTRFNATKDQAG+YYSTKIWQF+M+CPSCS+ +VIKTDPKNT YEYVEGIRKKDM FDPEEAET RVQDSEV+++LA DPLYRLEH++ D+RRA+SRKTVLTRLTEL DA A+DDYS+NA LRQ MRA  XXXXXXXXXXXXXXXXXXXXXXXXXXXX AR VKYRSRHKGFRT EK+KMA+I GESIFG  R S EQA R+A+LVKA+K+G+K   MRLL PD          A T RA SR +
Sbjct:    1 MSTLAAARADNMYYPPEWRPEYGGISKFQGSNGHNQYEKYGKIRFELPDHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSNVMVIKTDPKNTGYEYVEGIRKKDMEFDPEEAETQRVQDSEVSKQLAVDPLYRLEHEQRDKRRAASRKTVLTRLTELADAHAQDDYSSNARLRQTMRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSVKYRSRHKGFRTGEKAKMAAITGESIFGSGRESSEQARRKAVLVKASKLGLKTRGMRLLRPDQGSRCGDGERAATQRAPSRSL 307
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: A0A835Z9T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T3_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.670e-69
Identity = 120/253 (47.43%), Postives = 156/253 (61.66%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGVK--YRSRHKGFRTAEKSKMASIAGESIF 773
            MS+LAA +AD  YYPP W P+ G +SK  GSKG NQYE+YG IRFELP + WC GCGR +G+GTRFNA K++AG+Y++T +W F MRCPSCS E VIKTDPKN+DYE+  GIR+K+  FD E+AE   + D +   +LA DP+YRLEH   D RRA ++KT +TRL +  +     DY  NA LR+  R  +                            AAR +   + SR +  R  EKS++A+I   SIF
Sbjct:    1 MSSLAAVQADGFYYPPTWEPKHGSVSKAAGSKGSNQYEQYGVIRFELPYNAWCEGCGRPLGKGTRFNAKKEKAGAYFTTTVWAFHMRCPSCSTEFVIKTDPKNSDYEFSAGIRRKEQHFDAEDAEAPVLADEDTQARLATDPMYRLEHADADVRRADAKKTRITRLMDWSNDVRGSDYDANAALRRAWRGARRERVALEAEAQARGLGVELLPHSEADAAAARAMDLGHSSRLRTMRATEKSRLAAIRASSIF 253
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: A0A7S3H3M3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3M3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.870e-63
Identity = 107/195 (54.87%), Postives = 139/195 (71.28%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRC--PSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAA-DPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARK 596
            MS+LAAARADN Y+PPEW P+MGGISKFQGSKG NQYE+ G IRFELP  GWCLGCG H+ +G RFNA K++ G Y++T+IW F M+C   SC+ +  I TDPKN  Y++ EGIRK +  F P+  ++  V  S+ T++L A DP++RL+H+++DR+R  S K  L  LTEL+D   K+ Y  NA LR   R RK
Sbjct:    1 MSSLAAARADNFYFPPEWTPQMGGISKFQGSKGANQYEQKGIIRFELPFDGWCLGCGVHMTKGLRFNAKKEKEGKYFTTQIWSFHMKCFSTSCTQKYKILTDPKNCTYDFAEGIRKHEQDFTPDVDDSLIVATSDETKQLIANDPMFRLQHNEEDRKRVLSAKEHLEALTELQDEHHKNYYDVNAMLRNKNRKRK 195
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: A0A482S855_9ARCH (DUF572 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S855_9ARCH)

HSP 1 Score: 206 bits (523), Expect = 5.510e-61
Identity = 103/189 (54.50%), Postives = 134/189 (70.90%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAE-TARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQA---KDDYSTNAHLR 575
            MS+LAA+RADN YYPPEWRPEMGGISKFQGSKG NQYE+YG IRFELP   WCL C RH+G+G RFNA KD+AG Y+ST IW+F  +C SC  + VI+T+P+++ Y+YVEG+RK +    P+EA+ +  V   EV  K A D ++RLE   +  ++    +T   RL +L+D QA   K DY+ N+ LR
Sbjct:    1 MSSLAASRADNFYYPPEWRPEMGGISKFQGSKGKNQYEQYGIIRFELPFDAWCLKCKRHMGKGLRFNAKKDKAGKYFSTTIWEFKTKCYSCDQKFVIRTNPQDSTYDYVEGLRKHEQDAKPDEADGSIEVLSDEVKMKAATDAMFRLERGTETSQQV---RTAKQRLEDLEDLQAEVYKQDYAMNSLLR 186
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: C5YGN5_SORBI (Uncharacterized protein n=26 Tax=Poaceae TaxID=4479 RepID=C5YGN5_SORBI)

HSP 1 Score: 203 bits (517), Expect = 1.830e-58
Identity = 116/258 (44.96%), Postives = 147/258 (56.98%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGVKYRSRHKGFRTAEKSKMASIAGESIF 773
            MS+LAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   I +G RFNA K Q G+YYSTKIW FTM+ P C HE+VI+TDPKNT+Y  + G +KK   FD E+AET  +   E  +KLA DP+YRLEH ++D R+    + VL RL  L D++  DDY+ N  LR  +R++K                            AA  VK+ SR   F    K K A+I   SIF
Sbjct:    1 MSSLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSPCCKHEIVIQTDPKNTEYVIISGAQKKTEDFDVEDAETLLLPADEDRDKLA-DPMYRLEHQEEDLRKKKEAEPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKKRVAEEKKSARKMGLGVRLLPPSAADAAAAASVKFASR---FEKNRKDKRAAIKAASIF 252
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: A0A3B5ZQ27_WHEAT (Uncharacterized protein n=17 Tax=Pooideae TaxID=147368 RepID=A0A3B5ZQ27_WHEAT)

HSP 1 Score: 199 bits (507), Expect = 5.860e-57
Identity = 114/258 (44.19%), Postives = 145/258 (56.20%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGVKYRSRHKGFRTAEKSKMASIAGESIF 773
            MSTLAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   IG+G RFNA K Q G+YYSTKIW F+M+ P C HE+VI TDPKNT+Y  + G ++K   FD E+AET  +   E  +KLA DP+Y+LEH  +D R+    + VL RL  L D++  DDYS N  LR  +R++K                            AA  V++ S    F    K K A+I   SIF
Sbjct:    1 MSTLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNVWCGGCSSMIGKGVRFNAEKKQVGNYYSTKIWSFSMKSPCCQHEIVIHTDPKNTEYVIISGAQRKTEDFDVEDAETLLLPADEERDKLA-DPMYKLEHQGEDIRKKKEEEPVLVRLQRLSDSRHSDDYSLNRTLRDRLRSQKKRVAEEKKSARKMGLGVRLLPPSAEDAAAAARVRFASN---FEKNRKDKRAAIKAASIF 252
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: B4F842_MAIZE (Nuclear protein-like n=1 Tax=Zea mays TaxID=4577 RepID=B4F842_MAIZE)

HSP 1 Score: 195 bits (495), Expect = 1.050e-56
Identity = 101/196 (51.53%), Postives = 128/196 (65.31%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMR 587
            MS+LAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   I +G RFNA K Q G+YYSTKIW FTM+ P C HE+VI+TDPKNT+Y  + G +KK   FD E+AET  +   E  +KLA DP+YRLEH ++D R+    + VL RL  L D++  DDY+ N  LR  +R
Sbjct:    1 MSSLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSPCCKHEIVIQTDPKNTEYVIISGAQKKTEDFDVEDAETLLLPADEDRDKLA-DPMYRLEHQEEDLRKKKEAEPVLVRLQRLSDSRHSDDYALNRALRDRLR 193
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: A0A7S2WQQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQQ1_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.630e-56
Identity = 117/292 (40.07%), Postives = 160/292 (54.79%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAF--DPEEAETARVQD-----------SEVTEKLAADP--LYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------AARGVKYRSRHKGFRTAEKSKMASIAGESIFGPNRVSREQAHRQALLVKA 830
            MS+LAAARAD  Y+PP+W P      KFQGS+G NQYEKYG IRFELP  GWC GC RH G+GTRFNA K++ G Y+ T+I++FTM+C SCSHELVI TDPKNTDY++  GI+KKD  F  D E+   +R+Q+           + V E+ A +   +Y+LEH+ DD++R  +    L  L      +   DY  NA LRQ MR ++                                   +AR + +    + FR A+K +M S+   SIFG    + ++  + A+   A
Sbjct:    1 MSSLAAARADGFYHPPDWDPNKTSRKKFQGSRGANQYEKYGVIRFELPYDGWCEGCERHYGKGTRFNAKKEKDGMYFRTQIFKFTMKCHSCSHELVIATDPKNTDYDFRSGIKKKDEEFSVDREDGVDSRIQEKLDEIYKVGGHAAVEERHARETNAIYKLEHENDDKKRVLTESERLQTLYASNQVRQLYDYDANAVLRQTMRGKRRAEEALDREAKARGLSVKLLPGSETDQHETAQALSSARELTHARTQQAFRLAKKKQMLSVNAASIFGEASDNHQKHVKHAMFAAA 292
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: A0A3L6G8J7_MAIZE (Coiled-coil domain-containing protein 130 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6G8J7_MAIZE)

HSP 1 Score: 200 bits (508), Expect = 8.660e-56
Identity = 113/257 (43.97%), Postives = 147/257 (57.20%), Query Frame = 3 
Query:   24 STLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGVKYRSRHKGFRTAEKSKMASIAGESIF 773
            S+LAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   I +G RFNA K Q G+YYSTKIW FTM+ P C HE+VI+TDPKNT+Y  + G +KK   FD E+AET  +   E  +KLA DP+YRLEH ++D R+    + VL RL  L D++  DDY+ N  LR  +R++K                            AA  VK+ S+   F  + + K A+I   SIF
Sbjct:  119 SSLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSPCCKHEIVIQTDPKNTEYVIISGAQKKTEDFDVEDAETLLLPADEDRDKLA-DPMYRLEHQEEDLRKKKEAEPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKKRVAEEKKSARKIGLGVRLLPPSAEDATAAASVKFASK---FEKSRRDKRAAIKAASIF 369
[Close]
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Match: J3LCB7_ORYBR (Uncharacterized protein n=4 Tax=BOP clade TaxID=359160 RepID=J3LCB7_ORYBR)

HSP 1 Score: 195 bits (495), Expect = 3.280e-55
Identity = 110/258 (42.64%), Postives = 147/258 (56.98%), Query Frame = 3 
Query:   21 MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDKDDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGVKYRSRHKGFRTAEKSKMASIAGESIF 773
            MS+LAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   I +G RFNA K Q G+YYSTKIW FTM+ P C  E+VI+TDPKNT+Y  + G ++K   +D E+AET  +   E  +KLA DP+Y+LEH ++D R+    + VL RL  L D++  DDY+ N  LR  +R++K                            AA  VK+ S+   F  + + K A+I   SIF
Sbjct:    1 MSSLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSPCCKQEIVIQTDPKNTEYVIISGAQRKTEDYDVEDAETLLLPADEERDKLA-DPMYKLEHQEEDLRKKKEAEPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKKRVAEERKSARKMGLGVRLLPPSAEDATAAAYVKFASK---FEKSRRDKRAAIKAASIF 252
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig845.19822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV1_ECTSI8.540e-14079.15Coiled-coil domain-containing protein 94 n=2 Tax=E... [more]
A0A835Z9T3_9STRA2.670e-6947.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3H3M3_9STRA1.870e-6354.87Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482S855_9ARCH5.510e-6154.50DUF572 domain-containing protein (Fragment) n=1 Ta... [more]
C5YGN5_SORBI1.830e-5844.96Uncharacterized protein n=26 Tax=Poaceae TaxID=447... [more]
A0A3B5ZQ27_WHEAT5.860e-5744.19Uncharacterized protein n=17 Tax=Pooideae TaxID=14... [more]
B4F842_MAIZE1.050e-5651.53Nuclear protein-like n=1 Tax=Zea mays TaxID=4577 R... [more]
A0A7S2WQQ1_9STRA2.630e-5640.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3L6G8J7_MAIZE8.660e-5643.97Coiled-coil domain-containing protein 130 n=1 Tax=... [more]
J3LCB7_ORYBR3.280e-5542.64Uncharacterized protein n=4 Tax=BOP clade TaxID=35... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig845contigF-serratus_M_contig845:96678..103308 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score420.2
Seed ortholog evalue9.5e-115
Seed eggNOG ortholog2880.D8LKV1
KEGG koko:K13115
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to virus
EggNOG OGsCOG5134@1,KOG2990@2759
Ec32 ortholog descriptionCWC16 protein
Ec32 orthologEc-11_005670.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons4
Model size1347
Cds size1077
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig845.19822.1prot_F-serratus_M_contig845.19822.1Fucus serratus malepolypeptideF-serratus_M_contig845 96698..103058 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932488.6854007-UTR-F-serratus_M_contig845:96677..966971622932488.6854007-UTR-F-serratus_M_contig845:96677..96697Fucus serratus maleUTRF-serratus_M_contig845 96678..96697 +
1690964333.5171218-UTR-F-serratus_M_contig845:96677..966971690964333.5171218-UTR-F-serratus_M_contig845:96677..96697Fucus serratus maleUTRF-serratus_M_contig845 96678..96697 +
1622932488.7670805-UTR-F-serratus_M_contig845:103058..1033081622932488.7670805-UTR-F-serratus_M_contig845:103058..103308Fucus serratus maleUTRF-serratus_M_contig845 103059..103308 +
1690964333.586691-UTR-F-serratus_M_contig845:103058..1033081690964333.586691-UTR-F-serratus_M_contig845:103058..103308Fucus serratus maleUTRF-serratus_M_contig845 103059..103308 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932488.7018254-CDS-F-serratus_M_contig845:96697..968831622932488.7018254-CDS-F-serratus_M_contig845:96697..96883Fucus serratus maleCDSF-serratus_M_contig845 96698..96883 +
1690964333.5352106-CDS-F-serratus_M_contig845:96697..968831690964333.5352106-CDS-F-serratus_M_contig845:96697..96883Fucus serratus maleCDSF-serratus_M_contig845 96698..96883 +
1622932488.722164-CDS-F-serratus_M_contig845:101374..1016061622932488.722164-CDS-F-serratus_M_contig845:101374..101606Fucus serratus maleCDSF-serratus_M_contig845 101375..101606 +
1690964333.546166-CDS-F-serratus_M_contig845:101374..1016061690964333.546166-CDS-F-serratus_M_contig845:101374..101606Fucus serratus maleCDSF-serratus_M_contig845 101375..101606 +
1622932488.7344756-CDS-F-serratus_M_contig845:102072..1022631622932488.7344756-CDS-F-serratus_M_contig845:102072..102263Fucus serratus maleCDSF-serratus_M_contig845 102073..102263 +
1690964333.5639677-CDS-F-serratus_M_contig845:102072..1022631690964333.5639677-CDS-F-serratus_M_contig845:102072..102263Fucus serratus maleCDSF-serratus_M_contig845 102073..102263 +
1622932488.7490616-CDS-F-serratus_M_contig845:102590..1030581622932488.7490616-CDS-F-serratus_M_contig845:102590..103058Fucus serratus maleCDSF-serratus_M_contig845 102591..103058 +
1690964333.5762737-CDS-F-serratus_M_contig845:102590..1030581690964333.5762737-CDS-F-serratus_M_contig845:102590..103058Fucus serratus maleCDSF-serratus_M_contig845 102591..103058 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig845.19822.1

>prot_F-serratus_M_contig845.19822.1 ID=prot_F-serratus_M_contig845.19822.1|Name=mRNA_F-serratus_M_contig845.19822.1|organism=Fucus serratus male|type=polypeptide|length=359bp
MSTLAAARADNMYYPPEWRPEMGGISKFQGSKGHNQYEKYGKIRFELPVH
GWCLGCGRHIGRGTRFNATKDQAGSYYSTKIWQFTMRCPSCSHELVIKTD
PKNTDYEYVEGIRKKDMAFDPEEAETARVQDSEVTEKLAADPLYRLEHDK
DDRRRASSRKTVLTRLTELKDAQAKDDYSTNAHLRQGMRARKRKHREKEE
ESKARGLSIRLATPSPADAEAARGVKYRSRHKGFRTAEKSKMASIAGESI
FGPNRVSREQAHRQALLVKAAKVGIKAHKMRLLEPDSEIPSAATTTRASS
RGVCCERSGGESSDREDRVGKVVASATKKRRKARMSSRAGAVASVPVGGL
AAIADLYN*
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mRNA from alignment at F-serratus_M_contig845:96678..103308+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig845.19822.1 ID=mRNA_F-serratus_M_contig845.19822.1|Name=mRNA_F-serratus_M_contig845.19822.1|organism=Fucus serratus male|type=mRNA|length=6631bp|location=Sequence derived from alignment at F-serratus_M_contig845:96678..103308+ (Fucus serratus male)
GAGCGAAGCACGGCGGTACGATGTCAACTCTCGCCGCCGCTAGGGCGGAC
AACATGTACTACCCCCCAGAGTGGAGGCCGGAGATGGGAGGAATCTCCAA
GTTCCAGGGCTCCAAGGGACATAACCAGTACGAGAAATACGGCAAGATCC
GCTTCGAGCTGCCCGTACATGGCTGGTGCCTCGGCTGCGGAAGGCACATC
GGCAGGGTGAGAGATCCTAGTCGGACGTCAGTGCGAAAAGGCACAACTTT
CCAATCGTATTCAAGCAGTATATGTCCTACAGACGTACAAGGTAGCTCGT
TGTTTCTCAGTAAGTCAGTATACTAGCTTTACTCGGTGCTGTCTATCCTG
GACGCTCTAAAACTTAAATCTCCTACTTATATTCTAGAGTATTATATAAG
TTTTATTTGTACTTTTATTTATATCTCACTCATAGACGATGAACCTCATA
TCATCATTACCATCCTGCCTGTGGTCACTTAATCAAGGATTTTCTATCTC
TCATCGGTTCACGCCTTACGATGTTTTATCCAGCGATGTAAGTTTAGCAA
TCTTACAACTCGTCAACTAATGGTTGAATTTTACTTACTCACGTTCCCAC
GCTTTCCGTTACGGAAGAAAGCGTACTCTTCCTTCGGTAAGAATCGAACT
CACGACTTCCGTACTATCAATAGCAGCTGTGCAGGTTACCTACTATTAAT
AGATCACTCGGGCGACATACAAAATTCAAGTACGATTGTTTAAAATTCAC
CATGTAGTTGTTTCAAGAAAAATCTTTACGCATCTAGACCTTTTGAGATG
TCATACTGTACTGTACTGTACTGTACTGTACTGTACCCCAGTCAGGGGAG
GAAAATATCAAAACGTTTAGGTGGGAGCACAGGCTGCAAAGACAAAACTT
CTTCATGGCTATTGTTTCTCACATTCAGCATGTTGGTTGTCAACCCGAAA
AAACTACGTTACACGGCGGTGGCCAATCCCGCTCGTGGTCTGCTGAGCAG
AGAAAATATAAAACGTCTGGCAGCGCCCCCCCCTACCCCCCACGCTGCTC
GTTCGGAGAAATTAAAACCAAAAAATCACGTGACACGTCTACATGCCTAG
GCGCTACGCAGGTCTCGTTCCGTCTCGCGCCCGTACAAGGATTCCTTTAA
AACGTCGGCTAGGCCAATGGGTGTCGCTTCGCAAAATTCTACGTTTCCGT
GTGCGATAACAACTTTCCCAGTCTCGTTGCCTCTCTTTTCTCCTGGCGAT
GTCTAGCCGCGTCTACCTCTTATTTCCCCCACGCGTCCGTGAAACTCCAC
CCACCGTCCGTGATCATCTCCACCCGCACCTCAGCCTGTAACGCCGTCGC
TTTCCAACCCCCCGTTATGCCAGACGCCCGGATGTCGGTCTGTACGCGAC
CGCCCCAATTCTGCTTCCCACCCCGTCCTCTCCGCACTGCACCCTCAAGG
TTTCCGAACGCGATTCGCTTTGGCAGCCGCCCGCCGCTCATTCGGATGAG
CGCCCCCGCCCTCAAAAGTCTTCTCGTGCGCAACGTTGTCTCAATACTTT
CGCACCGGGTTATCTCAAGGGCACGGTTGTACGAGGTCATCCGATGGTCT
GGTCTCTTGCGCTGTGCCACGATGATACGAAGCAAGACCCGATAGTGTAC
GGTGCGGATTTTGGCGCAGTGTTCCCAGCGGAGGGTCCACGTACTGCATC
CATACAGGAGGGCCGCGATTGCCTCGGCCTTTGCCATTCGGGTCTTGGGG
TAGGGCGCTACTTTCGGTTGGTCGTAGAGCTCACGTAGGTACCGCCTGAT
GCGCATCCCGCATGAGCGGGTCTGCCTGGCGATTTCAACGGACATGTCCG
GGGTTTCGGTCACGACGCCCCCTAGGTAGATGAAGGATTGCACCTGTTTG
TAGATTTTCCCGGCTGCTTCGACTCGCACCATCGTCCGCGGTGGAGGCAT
ACACATGAACTCTGTCTTCTTCGCCGACGCAGTTAACGCGAAAGCTTAGC
AAGCCTCTACGATAACTTCCGTAGTCTAAGCGAGCCCGTCCGGTGATCGC
GAAACTATTCAGGCGTCATCCGCGTACAGCATGCCCCACACCGCACGACG
AATGCAGTCCATAGCTGGCTCCGGTCCCACCGACGTCAAGGCTCGGCGAG
GATGGCGGGATGCTCGCCGAATCTTTGGGAGACAATTCCAGTACGGCTGC
GAAGATATCGAACTACAGCGGGGATGATACACATCCTTGCCGTAGTCCTT
GCTCCACCTCTAACCGATCAGAGCAGACATCGTGATCAGGTCGCATACAA
GCTCTCATCCCATCGTGGAATTTTTGGATGACTGTTATCATCTGCGGTGG
TACCCCGATGCGAGCGAGTACCCGCCACAGAAGAGTGCCGTCAACGGTGT
CTTACGCCATCTGGAGATCTATGAAACACACGAAGGAAGACACTCCTGGC
TTCCGCCCAACTTCCTGCAGCCTGCAAACCACAAAGATCATATCCGTGGT
CGAGCGATTATGTCGAAACCCGCACTGCTCCTCCGGTAACAGCCCCTTCG
CTTCATAGTAAGCGCTAAGTCTCTTGGCGACCACTTTGGAGAACCTTACC
CACGTGTGACCGAGCGAGATGCCGTGGTAGTATCCGCACTCGGTCGTGTC
GACCTTTTTATGGAGTACGGTGATAACCGCGTCTTTCCGATGCCGTGGGA
CTTCGCCCTCGCGCCAGATGGGAATGGTAAGCCAGTGGAGCTCCAGCAGG
ATGGTCCGGTCTTGTTGACGCCCGAGTTTCAGCAGTTCCGCAGGAAAACC
ATCTGGCCCCCCTGCTTTTGCCAATTGCCTTCATCGCTGTGGCAAATTAC
TCTTTCGTGGGCTCGTTCTCGAGGGCGCTCTCGACTGGATGTTCCGGCAG
TCTCTTCGGGATGTTGAGATCGAGCATGTCGGATTTAGCGTTCAGCAGCG
ATCGGAAGAATCACACGCACCTCTCGCGGATACGTCCTTTGTATAAAATA
CTCTAAAATGTTATTCTGCTCCTCATTTCTTCCCTTTTAATACTTTGTTC
TACATCATATATAATACAGTACTGGTATGTACTATAGCACGAGTACTTGT
AGAAGTTAGAAAAATTAATCCGTGATGTTGAACTGACTGATCAATACTGT
AGGGTAGTACCATCAATACTGTAGGCAGTGTACCCGAACCATTGTTACAA
AACAGTGACCTGTACGGTAAAATCGGAGGTATCAAAGTCTTGGCACACCC
CCTAGACTGACTTTCCAGGCTCGATTGCTGGATTGCTGGATTGCTCCACA
AACAAGAGGGTGACAATGCCAAAAAGGGCGGTTTTCGAAAGATCTCGTCG
AGAGCTTTCTTTAGATGATTCGGTCGGTGTTCATATCTTGTTGGTTGTGG
CGCAATCGAGCCTGGAAAGTCAGTATAGGGGGTGGACCAAGACTCCGATA
CTTACGGTAGCTGCTGCTGTATGCTTCATATATTTTCCCTCCGGCAGTAC
TACGATTACTGTAGATACTCTAGTGGATGAGTAAGGGGCTTCGCCTCTTA
CAGTTGTATTTCACAGATTCGACGTACCGGCTAAATGTACCTTAATACCT
TAGCACCTTAAGATTGCACTCAAGCGACGTTCACAGCGGCAAAGCAGAGC
GAGGCTGTACATTAGACATTGAGGGACTTGTTTATCCAAGTAGAGAGTTG
CTTATACAGTAGTCTTTAAGGGGCTTGTTCATACAGTACTGGTAGTGTTT
TAGGGACTTGTTTATACAGGAGACTTTAAGGGGCTTGTTTATACAGTAGA
CTTCAAGGGACTTGTTTACACACCAGACTTTAAGAGACTTATTTATACAG
TACAGGTAATGTTGTTGTTGTTGTTTGAAGAAAATACAGAACGCACCTAG
ACCTTCTGAGAGAATGTTGTTGTTGTTGTTGTTGTTGTTTCTCGCATTCA
GGGTATGGTTTTGGTTGCCAACCCGAAAAAAACTACTTTACACGGTGGCC
AATCCCGCTCGTGGTCTGCTGGACAGGGGAAAAAAAAAAAGTCTGGCAGG
CAGCGCCCCCCCCCTCCCCACGTGTGCGCTGCCCGTTCGGAGAAAAAATA
AATTAAAATAAAATAAAATCACGCGACGCATCCACATGTCTAGGCGCTAC
GCAAGTCCGCGTTACGCAGGTGGTCTCGGTCCGTCCCGCATCCGTGCAAG
GATTCCTACGACTCGTCAGCTAGGCCAATGGGTGTCGCTTCGCAAAACTC
TTCGCTTCGCAAAACTCCCGTGTGCGATTGCAACTTTCCCAGTCTCGTTG
CCTCTCTCTTCTCGATGTTGGTATCCGTTACGAAAGCAACAGCTTCCTTT
CGAAGTTCAACTGCGATTCAGATCCTCATGCTCTAGCTTAGGCACCCCAA
CCGCCGAAGGACTCGTTGACACACACGCTCGATTCGAGTGGGCTATAACA
TACTGGGCACCTCATCGGCGTACAGATACCATGAGCTCGAGCGAGATATT
TTATCGTCCCGACCTTGTTTGGCCCCTCTGCTGGAGACACAACCCTTTGC
AAGAGGAATGGATCACGGTCTACAGCAGTAGTCGAGATACCCTCTTTCTT
AACTTGTTGCACATGGGACCTGAGCTAGCTCCATACCCCCGAAAACACGC
TCCCCCCTCCCCTCGTACTGTCGCATTTCATTCGCCATCGGTGCCAGGGG
ACGCGCTTCAACGCGACCAAGGACCAGGCGGGCTCATACTATAGCACCAA
GATATGGCAGTTCACCATGAGATGTCCCTCCTGCAGCCACGAGCTGGTTA
TCAAGACGGACCCGAAGAACACCGACTACGAGTACGTGGAGGGCATCCGC
AAGAAGGATATGGCGTTCGATCCGGAGGAGGCAGAGACTGCGCGTGTTCA
GGACAGCGAGGTTACCGAAAAGCTCGCAGGTTAGGTGTTGGCATGCAGGC
GAAAAGTCAGACGAGAAGGAATATCGTTGCGCCAACGCTCTGCTGTTTTA
GTTATAATTGGGAGCTCCTGGTACTCTTGTTGCTGTTTTCGTTTGCTCAT
CTGGAGAGCAACGTTCGTCCAGTAGGTGAAGCAAAAATTGCCGTTAAGAA
CTAGAGATAACGCCCGATACCACATACCGTAGCCTTTTCTCTTCCTGTTT
AATCAGTTGGAGGGCAGGGCAGGACATGACATGACGGGACTCGTTTTTCG
AGCTTCGGTGCGTCACGCGCATTCAAATCAAATGAATCCCGTATCGACGT
TGACCGCTCCTGATCCTGAATTGTTTCTGATTCTGAGCTCGATCCTTCGG
TGACACAGCGTCGCTGAGCTGTTTTTTCTTGTTGCCGCTGACCTTATCTC
GCTGCCGTTCATGGCGCTGTCTTGACCCTTCCCGTGCGCGCGCAGCGGAT
CCTCTCTACCGTCTGGAGCACGATAAGGACGACAGGCGACGAGCGTCATC
AAGGAAGACTGTGCTGACTCGGCTGACGGAGCTGAAGGATGCGCAAGCGA
AAGATGATTATTCCACCAACGCTCACCTGCGCCAAGGGATGAGGGCTAGA
AAGAGGAAGCACCGTGAGAAGGAGGAGGAATCGAAGGTACCTGTAAAGGC
GAAGGGGGGTAGATGGCGCTGGGATTGCTCTAGAAACTAAAAATTAAAGT
TCAGCGTCATGTTTATACTGTACTGTACGACTAATACATTCCGTCTCTCA
AACGAAGATAGGTGCTCAGACGCATTCAAGAGGAGATCCTTGACCTTTGA
TTTCTCTCAGGTTTCAGACCCATTCAGCCATGGGCGGAAGACCTCGAAGT
TTCCCTACAAGCGCCTCCTCGCAAGTCCGCTCTCTTTTTCTGAAAAGAAA
TGCCGGTGCTCGGTTCCCGTTTCTGTTTCTGTTTCTGTTTCTGTTTGTAT
TTCCGTGGTCCAGGCGAGAGGGCTGAGCATACGTCTCGCCACACCAAGTC
CGGCAGATGCCGAGGCCGCGCGTGGCGTGAAGTACCGCAGCCGTCACAAG
GGGTTTCGGACTGCGGAGAAGTCGAAGATGGCTTCGATAGCCGGAGAATC
AATTTTTGGCCCAAACCGGGTGTCGCGCGAGCAGGCCCACCGACAGGCCC
TGCTCGTTAAAGCCGCCAAGGTCGGTATCAAGGCGCACAAAATGCGCTTG
CTTGAGCCCGATAGCGAGATCCCGTCAGCCGCGACGACAACCCGCGCGTC
CTCTCGAGGCGTGTGTTGTGAAAGAAGCGGTGGTGAATCGTCGGATCGCG
AGGATCGCGTGGGAAAAGTCGTAGCGAGCGCAACAAAGAAACGTCGGAAA
GCGCGGATGTCGTCCAGAGCAGGAGCCGTTGCAAGCGTTCCAGTTGGCGG
GCTCGCGGCTATCGCAGATTTATACAACTGAAACTCGGTGATGCAGGCCT
TTTTTAGCGCGTTAAGGATAATACACGCAGGGTTTTTTTCGTATCTCACT
TACGGCCGATGGGCCTCAATGTGGTAGGTTACCAATCCCACCTGTTGCAA
TGTGATTACCATCCTGTCATCCTGTCATCCTGTCTGTGGTTACGAAGGAT
CTTCCCATCTCTCCCCGTTTCTCGCCTTGTTAAATTTTAAAGAAAAGTCT
GAACGCAACTACCAGTATTAATATACTCCCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig845:96678..103308+

>mRNA_F-serratus_M_contig845.19822.1 ID=mRNA_F-serratus_M_contig845.19822.1|Name=mRNA_F-serratus_M_contig845.19822.1|organism=Fucus serratus male|type=CDS|length=2154bp|location=Sequence derived from alignment at F-serratus_M_contig845:96678..103308+ (Fucus serratus male)
ATGTCAACTCTCGCCGCCGCTAGGGCGGACAACATGTACTACCCCCCAGA
GTGGAGGCCGGAGATGGGAGGAATCTCCAAGTTCCAGGGCTCCAAGGGAC
ATAACCAGTACGAGAAATACGGCAAGATCCGCTTCGAGCTGCCCGTACAT
GGCTGGTGCCTCGGCTGCGGAAGGCACATCGGCAGGATGTCAACTCTCGC
CGCCGCTAGGGCGGACAACATGTACTACCCCCCAGAGTGGAGGCCGGAGA
TGGGAGGAATCTCCAAGTTCCAGGGCTCCAAGGGACATAACCAGTACGAG
AAATACGGCAAGATCCGCTTCGAGCTGCCCGTACATGGCTGGTGCCTCGG
CTGCGGAAGGCACATCGGCAGGGGGACGCGCTTCAACGCGACCAAGGACC
AGGCGGGCTCATACTATAGCACCAAGATATGGCAGTTCACCATGAGATGT
CCCTCCTGCAGCCACGAGCTGGTTATCAAGACGGACCCGAAGAACACCGA
CTACGAGTACGTGGAGGGCATCCGCAAGAAGGATATGGCGTTCGATCCGG
AGGAGGCAGAGACTGCGCGTGTTCAGGACAGCGAGGTTACCGAAAAGCTC
GCAGGGGACGCGCTTCAACGCGACCAAGGACCAGGCGGGCTCATACTATA
GCACCAAGATATGGCAGTTCACCATGAGATGTCCCTCCTGCAGCCACGAG
CTGGTTATCAAGACGGACCCGAAGAACACCGACTACGAGTACGTGGAGGG
CATCCGCAAGAAGGATATGGCGTTCGATCCGGAGGAGGCAGAGACTGCGC
GTGTTCAGGACAGCGAGGTTACCGAAAAGCTCGCAGCGGATCCTCTCTAC
CGTCTGGAGCACGATAAGGACGACAGGCGACGAGCGTCATCAAGGAAGAC
TGTGCTGACTCGGCTGACGGAGCTGAAGGATGCGCAAGCGAAAGATGATT
ATTCCACCAACGCTCACCTGCGCCAAGGGATGAGGGCTAGAAAGAGGAAG
CACCGTGAGAAGGAGGAGGAATCGAAGCGGATCCTCTCTACCGTCTGGAG
CACGATAAGGACGACAGGCGACGAGCGTCATCAAGGAAGACTGTGCTGAC
TCGGCTGACGGAGCTGAAGGATGCGCAAGCGAAAGATGATTATTCCACCA
ACGCTCACCTGCGCCAAGGGATGAGGGCTAGAAAGAGGAAGCACCGTGAG
AAGGAGGAGGAATCGAAGGCGAGAGGGCTGAGCATACGTCTCGCCACACC
AAGTCCGGCAGATGCCGAGGCCGCGCGTGGCGTGAAGTACCGCAGCCGTC
ACAAGGGGTTTCGGACTGCGGAGAAGTCGAAGATGGCTTCGATAGCCGGA
GAATCAATTTTTGGCCCAAACCGGGTGTCGCGCGAGCAGGCCCACCGACA
GGCCCTGCTCGTTAAAGCCGCCAAGGTCGGTATCAAGGCGCACAAAATGC
GCTTGCTTGAGCCCGATAGCGAGATCCCGTCAGCCGCGACGACAACCCGC
GCGTCCTCTCGAGGCGTGTGTTGTGAAAGAAGCGGTGGTGAATCGTCGGA
TCGCGAGGATCGCGTGGGAAAAGTCGTAGCGAGCGCAACAAAGAAACGTC
GGAAAGCGCGGATGTCGTCCAGAGCAGGAGCCGTTGCAAGCGTTCCAGTT
GGCGGGCTCGCGGCTATCGCAGATTTATACAACTGAGCGAGAGGGCTGAG
CATACGTCTCGCCACACCAAGTCCGGCAGATGCCGAGGCCGCGCGTGGCG
TGAAGTACCGCAGCCGTCACAAGGGGTTTCGGACTGCGGAGAAGTCGAAG
ATGGCTTCGATAGCCGGAGAATCAATTTTTGGCCCAAACCGGGTGTCGCG
CGAGCAGGCCCACCGACAGGCCCTGCTCGTTAAAGCCGCCAAGGTCGGTA
TCAAGGCGCACAAAATGCGCTTGCTTGAGCCCGATAGCGAGATCCCGTCA
GCCGCGACGACAACCCGCGCGTCCTCTCGAGGCGTGTGTTGTGAAAGAAG
CGGTGGTGAATCGTCGGATCGCGAGGATCGCGTGGGAAAAGTCGTAGCGA
GCGCAACAAAGAAACGTCGGAAAGCGCGGATGTCGTCCAGAGCAGGAGCC
GTTGCAAGCGTTCCAGTTGGCGGGCTCGCGGCTATCGCAGATTTATACAA
CTGA
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