mRNA_F-serratus_M_contig841.19796.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: D7FV81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV81_ECTSI) HSP 1 Score: 190 bits (483), Expect = 4.050e-57 Identity = 101/145 (69.66%), Postives = 117/145 (80.69%), Query Frame = 1
Query: 1 LINSKEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKL-GAAGGGTH-IRFNAKTDIKVQNMVATTDVGFPIRMEGL-QNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLLLE 426
LIN EPKATAL+FKTGK+VVTG++S A+VDYAC FA IL KL +GG +H I F+ + D +VQNMVATTDVGFPIR+EGL + F NYEPELFPGLIYR+ +PKIC LIFVSGKVVLTGAKSAQQLE+ FKKMYP L +
Sbjct: 174 LINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQ 318
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A507CSA2_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CSA2_9FUNG) HSP 1 Score: 155 bits (393), Expect = 5.780e-45 Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 1
Query: 1 LINSKEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK--TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLL 420
++ ++PK TALIF +GK+VVTGAKS YA K+A I++KLG F A T+ K+QN+V + DV FPIR+EGL N HS+F NYEPELFPGLIYR+ +PKI LLIFVSGKVVLTGAK+ +Q+ +AF+K+YP+L
Sbjct: 101 IMRIRDPKTTALIFASGKMVVTGAKSEEQSRYAARKYARIIQKLG---------FQAAKFTEFKIQNIVGSCDVKFPIRLEGLANAHSTFANYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKTREQIYDAFEKIYPVL 233
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A507C8B1_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C8B1_9FUNG) HSP 1 Score: 154 bits (388), Expect = 2.030e-44 Identity = 80/141 (56.74%), Postives = 106/141 (75.18%), Query Frame = 1
Query: 1 LINSKEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK-TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLL 420
++ +EPK TALIF +GK+VVTGAKS A K+A I++KLG FNAK +D K+QN+V + DV FPIR+EGL + HS+F NYEPELFPGLIYR+ +PK+ LLIFVSGKVVLTGAK+ + + +AF+K++P+L
Sbjct: 85 IMRIREPKTTALIFASGKMVVTGAKSEEQARLAARKYARIIQKLG---------FNAKFSDFKIQNIVGSCDVKFPIRLEGLASDHSAFANYEPELFPGLIYRMVDPKVVLLIFVSGKVVLTGAKTREHIYDAFEKIFPVL 216
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A0J7JTS1_LASNI (Tata-box-binding protein n=2 Tax=Opisthokonta TaxID=33154 RepID=A0A0J7JTS1_LASNI) HSP 1 Score: 148 bits (373), Expect = 2.730e-43 Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 13 KEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK-TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLL 420
+EPK TALIF +GK+VVTGAKS A K+A I++KLG FNAK TD K+QN+V + D+ FPIR+EGL ++H +F +YEPELFPGLIYR+ +PKI LLIFVSGK+VLTGAK +++ +AF+ +YP+L
Sbjct: 4 REPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLG---------FNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 131
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A319CMX9_9EURO (TBP-domain-containing protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A319CMX9_9EURO) HSP 1 Score: 147 bits (372), Expect = 5.600e-43 Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 13 KEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK-TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLL 420
+EPK TALIF +GK+VVTGAKS A K+A I++KLG FNAK TD K+QN+V + D+ FPIR+EGL ++H +F +YEPELFPGLIYR+ +PKI LLIFVSGK+VLTGAK +++ +AF+ +YP+L
Sbjct: 4 REPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLG---------FNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVL 131
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A6G1HK28_9PEZI (TBP-domain-containing protein n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1HK28_9PEZI) HSP 1 Score: 147 bits (372), Expect = 5.770e-43 Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 13 KEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK-TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLL 420
++PK TALIF +GK+VVTGAKS A K+A I++KLG FNAK TD K+QN+V + D+ FPIR+EGL +KH +F +YEPELFPGLIYR+ +PKI LLIFVSGK+VLTGAK +++ +AF+ +YP+L
Sbjct: 4 RDPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLG---------FNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHTFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVL 131
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A1X6P871_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P871_PORUM) HSP 1 Score: 151 bits (381), Expect = 5.790e-43 Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 1
Query: 13 KEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAKTDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLLLE 426
+EPK TALIF +GKIVVTGAKS A A K+A I++KLG AG RF T+ KVQN+VA+ DV FP+R+EGL + H F +YEPELFPGLIYR+ PKI LLIFVSGKVVLTGAK Q++ +AF +Y +LL+
Sbjct: 106 REPKTTALIFSSGKIVVTGAKSEDASKLASRKYARIIQKLGYAGA----RF---TEFKVQNIVASCDVNFPVRLEGLSHGHHMFCSYEPELFPGLIYRMINPKIVLLIFVSGKVVLTGAKLRQEIYDAFNNIYHVLLQ 236
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A2T0FKA1_9ASCO (TATA-box-binding protein n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FKA1_9ASCO) HSP 1 Score: 150 bits (379), Expect = 6.340e-43 Identity = 81/143 (56.64%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 1 LINSKEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK-TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLLLE 426
++ +EPK TALIF +GK+VVTGAKS A K+A I++KLG FNAK TD K+QN+V + DV FPIR+EGL H +F +YEPELFPGLIYR+ +PKI LLIFVSGK+VLTGAK Q++ +AF+ +YP+L E
Sbjct: 96 IMRIREPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIIQKLG---------FNAKFTDFKIQNIVGSCDVKFPIRLEGLAFNHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQRQEIYDAFENIYPVLSE 229
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A139IVJ1_9PEZI (Uncharacterized protein n=6 Tax=Eukaryota TaxID=2759 RepID=A0A139IVJ1_9PEZI) HSP 1 Score: 147 bits (370), Expect = 8.540e-43 Identity = 78/137 (56.93%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 13 KEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK-TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLL 420
+EPK TALIF +GK+VVTGAKS A K+A I++KLG FNAK TD K+QN+V + D+ FPIR+EGL ++H F +YEPELFPGLIYR+ +PKI LLIFVSGK+VLTGAK +++ +AF+ +YP+L
Sbjct: 4 REPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLG---------FNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHMFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVL 131
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Match: A0A1X2H665_SYNRA (TBP-domain-containing protein n=2 Tax=Mucoromycotina TaxID=451507 RepID=A0A1X2H665_SYNRA) HSP 1 Score: 147 bits (370), Expect = 8.540e-43 Identity = 79/139 (56.83%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 13 KEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGTHIRFNAK-TDIKVQNMVATTDVGFPIRMEGLQNKHSSFINYEPELFPGLIYRLAEPKICLLIFVSGKVVLTGAKSAQQLEEAFKKMYPLLLE 426
+EPK TALIF +GK+VVTGAKS A K+A I++KLG F +K TD K+QN+V + DV FPIR+EGL H F +YEPELFPGLIYR+ +PKI LLIFVSGK+VLTGAK +++ +AF+ +YP+LLE
Sbjct: 4 REPKTTALIFASGKMVVTGAKSEDDSKLAARKYARIIQKLG---------FQSKFTDFKIQNIVGSCDVRFPIRLEGLAYSHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFQHIYPVLLE 133 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig841.19796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig841.19796.1 >prot_F-serratus_M_contig841.19796.1 ID=prot_F-serratus_M_contig841.19796.1|Name=mRNA_F-serratus_M_contig841.19796.1|organism=Fucus serratus male|type=polypeptide|length=142bp LINSKEPKATALIFKTGKIVVTGAKSAAAVDYACSKFAAILRKLGAAGGGback to top mRNA from alignment at F-serratus_M_contig841:91240..92776- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig841.19796.1 ID=mRNA_F-serratus_M_contig841.19796.1|Name=mRNA_F-serratus_M_contig841.19796.1|organism=Fucus serratus male|type=mRNA|length=1537bp|location=Sequence derived from alignment at F-serratus_M_contig841:91240..92776- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig841:91240..92776- >mRNA_F-serratus_M_contig841.19796.1 ID=mRNA_F-serratus_M_contig841.19796.1|Name=mRNA_F-serratus_M_contig841.19796.1|organism=Fucus serratus male|type=CDS|length=852bp|location=Sequence derived from alignment at F-serratus_M_contig841:91240..92776- (Fucus serratus male)back to top |