mRNA_F-serratus_M_contig841.19795.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig841.19795.1 vs. uniprot
Match: D7FV86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV86_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 2.010e-130 Identity = 255/542 (47.05%), Postives = 314/542 (57.93%), Query Frame = 1
Query: 100 TEGYPSHALRFLERSDRPSCSSTTTSTTLTSHYPAGYVAPQTPTQARAWTVQPSSTSP--SHNSSLSFLVRSPTSTSATPRVDRAGLHTGMENLGGGFIAAESSRSGVMPRQRLRPDTGDDADCTGSSEDEDDNVCPSIIFSCFPCLACLRPGKRRRNASKGKPFTGNDSSSGSGFGASLNDPLLSNQTDMGDHLPSPADFPKDLKLIEVEVQSARNVPPAAAAGVADSARMFVSLRMTPVQEGVGEQAEDTSLSARTVNPRWGARETFTFFVTDSGNAKAFLQLHLLYRPLRPLQPPSTSRSTTRHPFSRPRRD-SLTDTDTGXXXXXXXXXATAINTTPDAISVGEGFVDILGLFPLHDGMQTS---KGNSRRVAVPMRDPVSKRRTKCLVMLGLRCRRVNETIDTREDRRVLLYEYQMWSQFAGWSSTETRRAGKWSTMDGANVSDSFVKVAPPAGDDSEVVLPWCPFGGWEYSK---------------------------LSQDGWEALVVALNSAVWTEGYASGEGITRRRLWRRV 1626
+ G S+AL FLERSDR + S T + T T+ +P G+V PQ T++ T S +P S+L+FL R+P V AG G+ L GG +AA + R G +PR DTG ++C+ + ED D +CPS+++SCFPC R GKRR A N S SL+ PLL+ Q PSP +FP D+KLIEVEV+SARN+P +AD A + LR+TPVQEGVGEQ TSL+ R VNP WG RETFTFFVTD +KAFL L LLYRPLRP PP+ P R + SL +G +++ EGFVD+LGLF L DG T KGN+RRVAVPMR+P KRRT+C VMLGLRCRRVNETIDTREDR LYEY+ W++ AGWS+ +RAGKWST+DG+ +SD+F VAP G+D+EVVLPWCPFGGWEYS+ L WE VA AVW EGY G+ RRRLWRRV
Sbjct: 89 SRGRSSNALSFLERSDRSTDSPTVAAAT-TNPWPVGFVPPQG-TKSNRTTGWSQSYTPYLPRTSALAFLERAPGRARGNNIVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPY---DTG--SECSDAEEDSD--ICPSMLYSCFPCFNWSRRGKRRP-ADLLDGGLANSVKRESRAQLSLSTPLLTEQP------PSPTNFPTDVKLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRP--PPAPQPLQPPLPLRRGASEASLASVSSGSRHGD--------------VTIAEGFVDLLGLFSLVDGTYTPGTMKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDR---LYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEETPASAGNTGTSEAGGGRRDEFAPSLGAQEWENFAVAQKGAVWMEGYVQGDQAVRRRLWRRV 595 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig841.19795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig841.19795.1 >prot_F-serratus_M_contig841.19795.1 ID=prot_F-serratus_M_contig841.19795.1|Name=mRNA_F-serratus_M_contig841.19795.1|organism=Fucus serratus male|type=polypeptide|length=542bp MSTTILPQDARSSGESSISSSSSNSESNRRRSRTEGYPSHALRFLERSDRback to top mRNA from alignment at F-serratus_M_contig841:62089..84796+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig841.19795.1 ID=mRNA_F-serratus_M_contig841.19795.1|Name=mRNA_F-serratus_M_contig841.19795.1|organism=Fucus serratus male|type=mRNA|length=22708bp|location=Sequence derived from alignment at F-serratus_M_contig841:62089..84796+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig841:62089..84796+ >mRNA_F-serratus_M_contig841.19795.1 ID=mRNA_F-serratus_M_contig841.19795.1|Name=mRNA_F-serratus_M_contig841.19795.1|organism=Fucus serratus male|type=CDS|length=3252bp|location=Sequence derived from alignment at F-serratus_M_contig841:62089..84796+ (Fucus serratus male)back to top |