mRNA_F-serratus_M_contig841.19794.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE) HSP 1 Score: 158 bits (399), Expect = 5.050e-45 Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 1 LSSPLIELITPDSCSSSA--DVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYVQV 390
L+ PL+ELITPD C+SS+ + S LV +++KA+ GGV LVQLRD +S +S A LA + + + RA FV+NG+P ARA GADGVHLPE MMDRL LR GEWPR+VGCSVHS AAV AARLG DYVQV
Sbjct: 100 LAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMDRLVGLRGQGEWPRIVGCSVHSVAAAVEAARLGADYVQV 231
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA) HSP 1 Score: 101 bits (252), Expect = 9.030e-24 Identity = 62/130 (47.69%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 4 SSPLIELITPDSCSSSADVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIAKLAC-ILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYVQV 390
S P++ELITPD S++ + L ++ A+ GGV+LVQ+RD S +S LA +L D E V+NG AA A GA GVHLPE ++ + R++ VVGCSVHS EAAV AARLG DY+QV
Sbjct: 40 SGPVLELITPDG-SAAQPSTHLAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTRAREA---LAVVGCSVHSVEAAVAAARLGADYLQV 165
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A641ACW0_9CHLR (Thiamine-phosphate synthase n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A641ACW0_9CHLR) HSP 1 Score: 84.3 bits (207), Expect = 1.440e-17 Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 10 PLIELITPDSCSSSADVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPE-HMMD-RLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYVQV 390
P++ L+T + +S D+ +V A+ GGV +VQLRD+ G K+A LRD T+++A F++NGD A+ ADG+H PE H +D +L+++ ++G SVHS EAAV AA G+DY+ V
Sbjct: 10 PILCLVTNRNRTSKRDLGFIVDD---AISGGVNMVQLRDKDMEGPEKLKVAISLRDLTKDKAMFMVNGDVDLAKEVAADGIHFPEDHNLDSNCQNLKNNF----IIGRSVHSFEAAVEAASEGMDYLTV 131
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK) HSP 1 Score: 81.3 bits (199), Expect = 9.980e-16 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 10 PLIELITPDS-CSS--SADVSKLVHS-VKKALDGGVKLVQLRDRRSHGQSIAKLACILRDST-RERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYVQV 390
P + LITP+ C+ S + +++ S + A++GGV LVQLRD+ + + +A + +RD R A F++NGD A A ADGVHLPE + + + ++ V+GCSVHS+EAA+ A + DY+ V
Sbjct: 4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFINSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVV 135
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A0S8EJD6_9CHLR (Thiamine-phosphate synthase n=1 Tax=Dehalococcoidia bacterium SM23_28_2 TaxID=1703396 RepID=A0A0S8EJD6_9CHLR) HSP 1 Score: 74.3 bits (181), Expect = 1.030e-13 Identity = 46/108 (42.59%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 67 LVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYVQV 390
L +V +A+DGGV +VQLR++ + LA LR T ++A ++N A ADGVHLPE A R +G+ ++G SVHSAE AV A G DYVQV
Sbjct: 22 LEEAVAQAVDGGVNVVQLREKDLTAAQLIPLADRLRAITEDKALLIVNTHLDVALVCAADGVHLPERGPSVAAMRRLAGDG-FIIGRSVHSAEEAVRAEEEGADYVQV 128
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A7J2S481_9ARCH (Thiamine-phosphate synthase n=1 Tax=Thermoplasmatales archaeon TaxID=2268204 RepID=A0A7J2S481_9ARCH) HSP 1 Score: 71.2 bits (173), Expect = 1.190e-12 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 46 SSADVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYV 384
SS +V VK ALD G + +Q R++R + + K A IL++ + +A F++N A A ADGVHL + M + R G+ +++G +VH+ E AV A R+G DYV
Sbjct: 5 SSISKKGIVSDVKDALDAGCRFIQYREKRKSTREMVKEAQILKNICKNKAVFLVNDRVDIALAVDADGVHLGQDDMPVSFARRLLGD-KKIIGLTVHNVEEAVEAERMGADYV 116
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A5N9CYF9_9CHLR (Thiamine phosphate synthase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A5N9CYF9_9CHLR) HSP 1 Score: 72.0 bits (175), Expect = 1.640e-12 Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 55 DVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWP-RVVGCSVHSAEAAVNAARLGVDYV 384
D +L V A+ GGV LVQ+R + Q ++LA ++ RA V+NGDP+ AR+ GA GVHLPE S S P +VG SVHS+ AAV A G DY+
Sbjct: 66 DWDELARRVGAAVRGGVGLVQVRAKALDPQKQSRLASLIVSVVGARAQVVVNGDPEMARSSGAAGVHLPEISAGASVSEARSQLGPDALVGRSVHSSTAAVQAEADGADYI 176
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A2E5J2Y8_9CHLR (Thiamine-phosphate synthase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2E5J2Y8_9CHLR) HSP 1 Score: 69.3 bits (168), Expect = 7.400e-12 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 67 LVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYV 384
L +++ A+DGG+ +VQLR++ + + A LR T R+ F++N + + A GADG+HLP++ ++ +R S ++G S H +A AAR GVDY+
Sbjct: 23 LEDTIEYAIDGGIDMVQLREKELTRDELLRSADKLRSITSGRSKFLVNSNLEVAIKSGADGIHLPQNSTISVSDIRRSTPNHFLIGKSAHDQASATAAARDGVDYI 128
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A662K6Y0_9ARCH (Thiamine-phosphate synthase n=2 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A662K6Y0_9ARCH) HSP 1 Score: 68.6 bits (166), Expect = 1.630e-11 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 46 SSADVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVDYV 384
SS + + VK A+D G K+VQ R++ + + K A L+ ++RA+F+++ A A ADGVHL ++ M + R G+ +++G +VH+ E AV A +LGVDYV
Sbjct: 22 SSLSKNGTLFDVKNAVDAGCKIVQYREKNKSTRDMIKEAEQLKKLCKDRAFFLVDDRVDVALAVDADGVHLGQNDMPVEIARRLLGD-EKIIGLTVHNVEEAVEAEKLGVDYV 133
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Match: A0A2H5YC60_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR23 TaxID=2035418 RepID=A0A2H5YC60_9BACT) HSP 1 Score: 68.2 bits (165), Expect = 2.210e-11 Identity = 49/123 (39.84%), Postives = 65/123 (52.85%), Query Frame = 1
Query: 10 PLIELITPDSCSSSADVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIAKLACILRDSTRERAWFVINGDPKAARAWGADGVHLPEHMMDRLASLRDSGEWPRVVGCSVHSAEAAVNAARLGVD 378
P + L+T S D LV +V +A++GGV LVQ+R++ G + LA LR+ TR RA IN A ADGVHLPE + A R +G ++G SVHS EA A + G D
Sbjct: 6 PCLALVTDRHLYPSQDA--LVEAVAQAVEGGVDLVQVREKDLPGGHLLALAVRLREVTRGRALLFINERADVALLSEADGVHLPEAGLPPSAVRRLAGRR-LLIGASVHSVEAGYRAEQEGAD 125 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig841.19794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig841.19794.1 >prot_F-serratus_M_contig841.19794.1 ID=prot_F-serratus_M_contig841.19794.1|Name=mRNA_F-serratus_M_contig841.19794.1|organism=Fucus serratus male|type=polypeptide|length=130bp LSSPLIELITPDSCSSSADVSKLVHSVKKALDGGVKLVQLRDRRSHGQSIback to top mRNA from alignment at F-serratus_M_contig841:61056..61445- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig841.19794.1 ID=mRNA_F-serratus_M_contig841.19794.1|Name=mRNA_F-serratus_M_contig841.19794.1|organism=Fucus serratus male|type=mRNA|length=390bp|location=Sequence derived from alignment at F-serratus_M_contig841:61056..61445- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig841:61056..61445- >mRNA_F-serratus_M_contig841.19794.1 ID=mRNA_F-serratus_M_contig841.19794.1|Name=mRNA_F-serratus_M_contig841.19794.1|organism=Fucus serratus male|type=CDS|length=780bp|location=Sequence derived from alignment at F-serratus_M_contig841:61056..61445- (Fucus serratus male)back to top |