mRNA_F-serratus_M_contig84.19783.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: D8LCU6_ECTSI (ADP-ribose pyrophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCU6_ECTSI) HSP 1 Score: 291 bits (746), Expect = 3.550e-96 Identity = 144/194 (74.23%), Postives = 164/194 (84.54%), Query Frame = 2
Query: 2 RYRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDSWARCQFHPEASVDGESRDLTVLDRASGQALGVFPSSGVS-------AETLGLVKPEEA 562
RY+WPRPAVT DCLIY L+EG+PWILLIKRKNDPFKG WALPGGFVD+NEGL AAARRELEEETGVT+R +VQTGAYGDPGRDPRGHTITVAFMAWAPS+A+CSARAGDDAAEA FFPV+RLP MAFDH+K+I+DSWARC+F A+ DG ++V D+ASGQALG + +S S AE LGL+ P EA
Sbjct: 99 RYQWPRPAVTVDCLIYALDEGKPWILLIKRKNDPFKGGWALPGGFVDQNEGLDAAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTITVAFMAWAPSKAACSARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFG--ATNDGGG--VSVEDKASGQALGEYSTSSTSGAAGSVGAEALGLLVPVEA 288
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: A0A6V1NPN0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NPN0_HETAK) HSP 1 Score: 205 bits (521), Expect = 8.540e-63 Identity = 99/188 (52.66%), Postives = 130/188 (69.15%), Query Frame = 2
Query: 2 RYRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDSWARCQFHPEASVDGESR-----DLTVLDRASGQALGVFPSSGVSAETLGLVK 550
+YRWPRP+VT D +I+ +EE P++LLIKR N PF+G WALPGGF+D EGL A A REL+EETGV L Q GA+GDPGRDPRG T+TVAFMA APSRA A+A DDA + ++FP+ LP +AFDH+KI+ ++W RC+ P + E+ ++DRA+G+ LG P +A L +VK
Sbjct: 36 KYRWPRPSVTTDIVIFAVEEAIPYVLLIKRGNPPFQGSWALPGGFLDLGEGLEACAARELQEETGVAGLPLAQVGAFGDPGRDPRGPTVTVAFMALAPSRA-IGAKAADDAVDEEWFPLTNLPSLAFDHLKILEEAWQRCKPEPMTTPGAEAGADPALSTALIDRATGKPLGSVPGGEDTAAALAMVK 222
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: A0A7S2XUX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUX9_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.400e-51 Identity = 89/186 (47.85%), Postives = 123/186 (66.13%), Query Frame = 2
Query: 5 YRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDP-RGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDSWARCQFHPEASVDGESRDLTVLDRASGQALGVFPSS--GVSAETLGLVKP 553
YRWPRP+VT D ++T+E+G W+LLIKR +PF+G WALPGGF++ EGL A + RELEEET ++ +VQ GA+ DPGRDP RGH +TVA+ A AP + S +A DDAA+A++F V RLP +AFDH I+ +WAR QF + G+S + +DR + + L + G+ E L + P
Sbjct: 25 YRWPRPSVTTDSAVFTIEDGAAWVLLIKRLKEPFQGCWALPGGFLEDMEGLDACSARELEEETSISGLPMVQVGAFADPGRDPTRGHVLTVAYAACAPYK-SIGVKAQDDAADAEWFQVSRLPPLAFDHFDIMKVAWARIQF---TTTPGKSL-IEAIDRGTLKPLAKYDCEKIGIGLEQLQQITP 205
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: I2CQQ6_NANGC (Nudix hydrolase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CQQ6_NANGC) HSP 1 Score: 165 bits (418), Expect = 1.880e-47 Identity = 81/138 (58.70%), Postives = 100/138 (72.46%), Query Frame = 2
Query: 5 YRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDSWAR 418
Y++PRP+VT D L++ L+E + ILL++R N+PFKG WALPGGFVD++EGL +AA REL EET + Q G YG PGRDPRGHTITVA+ A+ S S ARAGDDA EA FF LP +AFDH KII ++W R
Sbjct: 49 YKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLS--SEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMR 184
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: UPI0019E754FB (NUDIX hydrolase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=UPI0019E754FB) HSP 1 Score: 158 bits (400), Expect = 8.240e-46 Identity = 73/132 (55.30%), Postives = 98/132 (74.24%), Query Frame = 2
Query: 5 YRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKII 400
Y +PRPAVT D +I+ L + P +LLIKR NDP+KG WALPGGFVDK+E L AA REL+EETG+TD +L Q +G+PGRDPRGHT++V ++ + ++ ARAGDDAA A++F + LP +AFDH ++
Sbjct: 5 YTFPRPAVTVDIIIFRLSDNNPEVLLIKRGNDPYKGHWALPGGFVDKDEPLETAAARELKEETGLTDILLTQMHTFGNPGRDPRGHTVSVVYVGYLTDEST--ARAGDDAAAAEWFKTEELPDLAFDHDVVV 134
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: A0A3M2HH92_9BACT (NUDIX hydrolase n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M2HH92_9BACT) HSP 1 Score: 157 bits (397), Expect = 2.910e-45 Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 2
Query: 5 YRWPRPAVTADCLIYT-LEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIIS 403
Y +PRP V+ D L+ EEGE +LLI+R +PF G WALPGGFV++NE L AAA+REL+EETGV + L Q GA+GDPGRDPRGH IT+ + P AS S RAGDDA A++FPV RLP +AFDH +IIS
Sbjct: 5 YPYPRPMVSVDILLLRRAEEGEK-VLLIQRDREPFAGRWALPGGFVEENEPLEAAAQRELQEETGVENIPLEQLGAFGDPGRDPRGHVITIVYGGILPEDASSSLRAGDDARRAEWFPVDRLPPLAFDHDQIIS 137
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: A0A662A2J4_9BACT (NUDIX hydrolase n=2 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A662A2J4_9BACT) HSP 1 Score: 154 bits (389), Expect = 3.780e-44 Identity = 75/132 (56.82%), Postives = 98/132 (74.24%), Query Frame = 2
Query: 5 YRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKII 400
Y +PRP VT D +I+ E + +LLIKR NDPFKG+WALPGGFVDK+E L AA RELEEETG++ +L Q +GDPGRDPRGHT++VA++ + P A A+AGDDA EA++F + LP++AFDH I+
Sbjct: 5 YPFPRPTVTVDIIIFRQSEKDHEVLLIKRGNDPFKGKWALPGGFVDKDEVLEIAAARELEEETGLSGILLTQMHTFGDPGRDPRGHTVSVAYVGYLPIGAV--AKAGDDADEAEWFKLNDLPELAFDHKLIV 134
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: A0A7V6LA33_9BACT (NUDIX hydrolase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7V6LA33_9BACT) HSP 1 Score: 152 bits (383), Expect = 3.890e-43 Identity = 72/136 (52.94%), Postives = 97/136 (71.32%), Query Frame = 2
Query: 2 RYRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDS 409
+Y +PRPA+TAD +++ + E +LLI+R +PF G WALPGGFVD+NE + AA REL+EETG+ L+Q GAYG PGRDPRGHT++V + A S +AGDDAAEA +F + LP +AFDH +II+D+
Sbjct: 3 QYNYPRPALTADVVLFVKNDKETRVLLIRRGKEPFMGSWALPGGFVDENEDIKDAALRELKEETGIVGLDLIQVGAYGKPGRDPRGHTVSVVYTAILDSEPEY--QAGDDAAEAGWFTIDELPGLAFDHEEIITDA 136
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: UPI000B525553 (NUDIX hydrolase n=1 Tax=Geofilum rhodophaeum TaxID=1965019 RepID=UPI000B525553) HSP 1 Score: 151 bits (382), Expect = 5.500e-43 Identity = 80/145 (55.17%), Postives = 101/145 (69.66%), Query Frame = 2
Query: 5 YRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDSWARCQFHPEA 439
Y +PRP+VTAD ++ + +ILLI+R DP+KG WALPGGFVD++E L AAARREL EETG+ LVQ GA+G PGRDPRGHT+TVA+ PS ARAGDDA EA +F ++ LP++AFDH II+ + R EA
Sbjct: 4 YAYPRPSVTADVVLLAGSGEDFFILLIQRAADPYKGCWALPGGFVDQDEDLEAAARRELLEETGLEVDSLVQVGAFGKPGRDPRGHTVTVAYATVWPS--VVEARAGDDAREAQWFSLRALPELAFDHDAIIAAALERLALGQEA 146
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Match: A0A2U2C482_9RHOB (NUDIX hydrolase n=1 Tax=Pararhodobacter marinus TaxID=2184063 RepID=A0A2U2C482_9RHOB) HSP 1 Score: 153 bits (387), Expect = 7.650e-43 Identity = 75/147 (51.02%), Postives = 100/147 (68.03%), Query Frame = 2
Query: 5 YRWPRPAVTADCLIYTLEEGEPWILLIKRKNDPFKGEWALPGGFVDKNEGLLAAARRELEEETGVTDRVLVQTGAYGDPGRDPRGHTITVAFMAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDSWARCQFHPEASV 445
Y +PRP+VT D L++++ + +LLI+RK DPFKG WA+PGGFV E L+ A RELEEETG+ + Q GAYG+PGRDPRG IT+AF+A PS A A+ G DA +A +FPV LP +AFDH +I++D A+ AS+
Sbjct: 5 YEFPRPSVTTDILVFSIRDAVLQVLLIERKFDPFKGAWAIPGGFVQMEEDLMQGALRELEEETGLAGIPIRQLGAYGEPGRDPRGRVITIAFIALVPS-ADLIAKGGSDAQDARWFPVDDLPPLAFDHAQIVADGRAQLARDVTASI 150 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig84.19783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig84.19783.1 >prot_F-serratus_M_contig84.19783.1 ID=prot_F-serratus_M_contig84.19783.1|Name=mRNA_F-serratus_M_contig84.19783.1|organism=Fucus serratus male|type=polypeptide|length=95bp MAWAPSRASCSARAGDDAAEADFFPVKRLPKMAFDHIKIISDSWARCQFHback to top mRNA from alignment at F-serratus_M_contig84:466457..468480- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig84.19783.1 ID=mRNA_F-serratus_M_contig84.19783.1|Name=mRNA_F-serratus_M_contig84.19783.1|organism=Fucus serratus male|type=mRNA|length=2024bp|location=Sequence derived from alignment at F-serratus_M_contig84:466457..468480- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig84:466457..468480- >mRNA_F-serratus_M_contig84.19783.1 ID=mRNA_F-serratus_M_contig84.19783.1|Name=mRNA_F-serratus_M_contig84.19783.1|organism=Fucus serratus male|type=CDS|length=570bp|location=Sequence derived from alignment at F-serratus_M_contig84:466457..468480- (Fucus serratus male)back to top |