mRNA_F-serratus_M_contig84.19776.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: D8LCT9_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT9_ECTSI) HSP 1 Score: 485 bits (1249), Expect = 1.060e-162 Identity = 244/410 (59.51%), Postives = 281/410 (68.54%), Query Frame = 1
Query: 724 CARFQPIDERDASQLGYEEFVEKYALPGRPVILKGGASQCFEGGLAWSRECLRKDAGNKTVTVRRWVPGSVSWARLEEAGQIRLDKLLTESPRRSFRGSSVVGEVVAVSGDISISGEMIETPQSWKTDDHARLGEGEAQXXXXXXXXXXXXXHEVQGXXXXXXXXXGGLHGARLKVRAVEDGLGEREPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGADALASALRGCDSSLVRGQRGVPWKTLKTWPRDGEVGDWV 1953
C RFQ IDER AS L YE+F+E YAL GRPV+LKGGAS CFE G AWSRE LR +AG+K V VRRWVP SVSWARLE+AGQ+ L++LL++ + G G+ G GEA E+ G +PLYLHDWS+PQNLG LL G+F+VPKFFAGD+LQR+AGRGLPYTDSWPSLF+GPKGS+SDTH+DSFGSHFWMALLEGKKRWLLYPK+ APLLYPIWPEGCHDPVFEA+L+ PDAT+ PAALLA+GF CVLEAGD+LFVPAGCPHRVENLT TLA+SCNYVDATN+ +L AL+DQA TDP A ALASAL C+ L R Q VPW LK WPR+GEV +W+
Sbjct: 58 CVRFQAIDERMASTLSYEDFIETYALRGRPVVLKGGASLCFEEGNAWSREALRVEAGHKVVPVRRWVPDSVSWARLEKAGQMPLERLLSQPATDTTSGQEGAGK-----------------------------GTGEAAACGQI---------EMDGG----------------------------DPLYLHDWSLPQNLGVASPLLAGKFRVPKFFAGDLLQRLAGRGLPYTDSWPSLFIGPKGSRSDTHIDSFGSHFWMALLEGKKRWLLYPKEEAPLLYPIWPEGCHDPVFEADLDNPDATRTPAALLAKGFSCVLEAGDLLFVPAGCPHRVENLTGTLALSCNYVDATNIDMSLAALQDQAFTDPQAAALASALGNCNRKLARRQEEVPWTMLKKWPREGEVAEWL 401
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: A0A2B4SNM2_STYPI (F-box protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SNM2_STYPI) HSP 1 Score: 211 bits (537), Expect = 2.740e-56 Identity = 113/232 (48.71%), Postives = 145/232 (62.50%), Query Frame = 1
Query: 1243 LKVRAVEDGLGE-REPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGA-DALASALRG-CDSSLVRGQRGVPWKTLKTWPR 1929
+K+ D L +EPLYL DWS+P + PD L ++PK+FAGD LQR A L Y DSWPSLF+ P G SD HVD+FGS+FWMAL +G+KRW + ++ PLLYP + + D VF+ +L PD ++P + A QC LE G++LFVP GCPHRVENL D+LAVS N+VD +N+ LE L AL DP + D L RG + QR + WK KTWPR
Sbjct: 285 MKISEFIDSLQTLQEPLYLFDWSIPTHA-PD---LAKELRIPKYFAGDFLQRTAPGSL-YRDSWPSLFIAPAGLHSDLHVDAFGSNFWMALFQGRKRWTFFQRKDIPLLYPHYQDSL-DLVFDIDLSCPDLDKYPLLMSAMPRQCTLEPGELLFVPHGCPHRVENLEDSLAVSSNFVDLSNLQVVLEELRGNALIDPRSQDLLLQMTRGDFPVKMFSQQRDLSWKEFKTWPR 510
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: A0A3M6TXI6_POCDA (JmjC domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TXI6_POCDA) HSP 1 Score: 209 bits (532), Expect = 1.340e-55 Identity = 113/232 (48.71%), Postives = 143/232 (61.64%), Query Frame = 1
Query: 1243 LKVRAVEDGLGE-REPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGA-DALASALR-GCDSSLVRGQRGVPWKTLKTWPR 1929
+KV D L +EPLYL DWS+P + PD L K+PK+FAGD LQR A L Y DSWPSLF+ PKG SD HVD+FGS+FWMAL +G+KRW + ++ PLLYP + + D F+ +L PD + P + A QC+LE G++LFVP GCPHRVENL D+LAVS N+VD +N+ LE L AL DP + D L R + Q + WK KTWPR
Sbjct: 283 MKVSEFIDSLQTLKEPLYLFDWSIPTHA-PD---LAEELKIPKYFAGDFLQRTAPGSL-YRDSWPSLFIAPKGLHSDLHVDAFGSNFWMALFQGRKRWTFFQREDIPLLYPHYQDSL-DLAFDVDLSCPDLDKFPLLMSAVPRQCILEPGELLFVPYGCPHRVENLEDSLAVSSNFVDLSNLHVVLEELRGNALIDPRSQDLLIQMTRDNFPVKMFSQQSDLSWKDFKTWPR 508
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: UPI0009E4E5F3 (bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4E5F3) HSP 1 Score: 209 bits (531), Expect = 1.660e-55 Identity = 107/219 (48.86%), Postives = 139/219 (63.47%), Query Frame = 1
Query: 1279 REPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGADALASALRGCDS--SLVRGQRGVPWKTLKTWPR 1929
+EPLYL DWS+P ++ PD L +PK+FAGD LQR L Y DSWPSLF+ P G SD HVD+FGS+FWMAL +G+KRW + K+ PLLYP + E D VF+ +L +PD +HP A +C+LE G++LFVP GCPHRVENL D+LAVS N+VD +N +E L+ AL DP A+ L + D + Q+ +PW K WPR
Sbjct: 295 QEPLYLFDWSIPTHV-PD---LAKELVIPKYFAGDFLQRTFPGSL-YQDSWPSLFIAPSGLHSDLHVDAFGSNFWMALFQGRKRWTFFSKEEVPLLYPHY-EDSLDLVFDVDLSSPDFDKHPLLSRATPRRCILEPGELLFVPYGCPHRVENLEDSLAVSANFVDISNFEVVVEELKGNALLDPQAEDLVIQMTKDDFPVKMFSQQKDLPWDEFKMWPR 507
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: UPI001CF103E8 (bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-like n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF103E8) HSP 1 Score: 205 bits (521), Expect = 7.540e-54 Identity = 108/230 (46.96%), Postives = 142/230 (61.74%), Query Frame = 1
Query: 1243 LKVRAVEDGLGE-REPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGADALASALRGCDS--SLVRGQRGVPWKTLKTW 1923
+K+ D LG +EPLYL DWS+P P+ L +PK+FAGD LQR A L Y +SWPSLF+ P+G SD HVD+FGS+FWMAL +G+KRW + ++ LLYP + E D VF+ +L PD +HP A QC+L+ G+VLFVP GCPHRVENL D+LA+S N+VD +N LE L+ AL DP A+ L L D + Q+ PW+ K+W
Sbjct: 287 MKISDFIDSLGTLQEPLYLFDWSIP-TYAPE---LAKELTIPKYFAGDFLQRTAPGSL-YKESWPSLFIAPQGLHSDLHVDAFGSNFWMALFQGRKRWTFFRREDTSLLYPHY-ENSMDLVFDVDLSNPDFDKHPLLSTATAQQCILQPGEVLFVPHGCPHRVENLEDSLAISANFVDLSNYEVVLEELKANALIDPCAEELLKQLAHPDFPIKMCSQQKDWPWQKYKSW 510
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: B3RNT4_TRIAD (JmjC domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RNT4_TRIAD) HSP 1 Score: 199 bits (506), Expect = 3.180e-52 Identity = 120/396 (30.30%), Postives = 185/396 (46.72%), Query Frame = 1
Query: 742 IDERDASQLGYEEFVEKYALPGRPVILKGGASQCFEGGLAWSRECLRKDAGNKTVTVRRWVPGSVSWARLEEAGQIRLDKLLTESPRRSFRGSSVVGEVVAVSGDISISGEMIETPQSWKTDDHARLGEGEAQXXXXXXXXXXXXXHEVQGXXXXXXXXXGGLHGARLKVRAVEDGLGEREPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGADALASALRGCDSS--LVRGQRGVPWKTLKTW 1923
I+ R A L ++EF+ +YAL +PVI+ C W+ E ++ AG++ V+R +P SV WARLE A + + + + +++P ++ + + LYL DWS+P N C L +PK+FA D LQR +G+ Y DSWPSLF+ P+G++S+ H+D+FGS+FWMAL +G+KRWL++ ++ PLLYP + D F +L + D A L + +C+L+ G++LFVP+GCPHRVENL ++A+S N+VD +N +E LE ++ D + L S L S + Q + WK K W
Sbjct: 172 IERRSAKDLSFKEFLSRYALQAKPVIITDAV--CNMISTPWTFEHIKNVAGDRKAAVKRLIPDSVEWARLEIARSMTVKEFVNN----------------------------MDSPSNFN----------------------------------------------------------DEQLLYLFDWSLPLN----CPELASELTIPKYFASDFLQRTP-KGILYHDSWPSLFIAPEGARSELHIDAFGSNFWMALFQGRKRWLIFRREDLPLLYPSYFNSL-DGTFNIDLSSNDDNFLRALSLCKPRECILQPGELLFVPSGCPHRVENLERSIAISANFVDLSNYHRVVEELEYSSMMDNESKVLLSVLTDSKFSTRMNSQQDNLAWKDFKNW 473
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: A0A024US26_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US26_9STRA) HSP 1 Score: 194 bits (494), Expect = 9.770e-52 Identity = 102/196 (52.04%), Postives = 127/196 (64.80%), Query Frame = 1
Query: 1249 VRAVEDGLGE--REPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDAT-QHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTD 1827
V A+ DG G + LY+HD S+P +L +L ++P +FAGD LQ G Y ++WPSLF+GP+G++S THVDSFGS+FWMALLEG+KRW L LLYP W G D VF +L P+ + +H AR + CVLE GDVLFVPAG PH V+NLT T+AVSCNY+DATN A AL QA TD
Sbjct: 106 VVALRDGKGSPGADSLYVHDVSIPLHLPGKLLVLTRHLRIPAYFAGDWLQHTP-EGTMYRETWPSLFLGPEGTESQTHVDSFGSNFWMALLEGRKRWCLVHPDDMHLLYPEWHAGSPDVVFGVDLARPEGSPEHALFRHARVWDCVLEEGDVLFVPAGTPHFVQNLTQTVAVSCNYIDATNWVRASTALAHQAYTD 300
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: A0A485LIU5_9STRA (Aste57867_21686 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIU5_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.510e-51 Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 1
Query: 1288 LYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDAT---QHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGADALASAL 1857
LY+HD S+P +L P +G +P +FA D LQ A G Y ++WPSLFVGP G+ S TH+DSFGS+FWMAL+EG+KRW L LLYP W G D VF ++ DA+ QH AR ++C+LEAGD+LFVPAG PH VENLTDT A+SCNY+DA+N A ALE QA TDP A L +AL
Sbjct: 226 LYVHDVSLPLHL-PQLMAQDGGVHIPAYFARDYLQH-APPGALYRETWPSLFVGPAGTASQTHIDSFGSNFWMALMEGRKRWRLIHPDDVHLLYPTWHVGTPDIVFAVDMTQDDASSRHQHALFQYARVYECILEAGDILFVPAGAPHYVENLTDTTALSCNYIDASNWARAQAALECQAWTDPRAAELLAAL 416
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: A0A8B6GCN7_MYTGA (JmjC domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GCN7_MYTGA) HSP 1 Score: 196 bits (497), Expect = 7.170e-51 Identity = 97/182 (53.30%), Postives = 120/182 (65.93%), Query Frame = 1
Query: 1282 EPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCHDPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTD 1827
EPLYL DWS+P N C L +PK+FAGD L+R G Y DSWPSLFV P+G S+ HVD+FGS+FWMAL +GKKRW+ +P+ P LYP + E DPVF +L PD TQ+P L +CVLE GDVLFVPAGCPHRVENL ++A+S N+VD +N + L+ AL D
Sbjct: 310 EPLYLFDWSLPIN----CPSLAKELTIPKYFAGDFLKRTE-EGSLYKDSWPSLFVAPEGITSELHVDAFGSNFWMALFQGKKRWVFFPQSDVPYLYPEY-EHSLDPVFAVDLSRPDLTQYPLLQLTTPIECVLEPGDVLFVPAGCPHRVENLETSVAISSNFVDQSNFTLVKQELKINALMD 485
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Match: UPI001E1D4C3B (bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4C3B) HSP 1 Score: 196 bits (498), Expect = 8.250e-51 Identity = 99/222 (44.59%), Postives = 136/222 (61.26%), Query Frame = 1
Query: 1276 EREPLYLHDWSVPQNLGPDCSLLEGRFKVPKFFAGDMLQRVAGRGLPYTDSWPSLFVGPKGSKSDTHVDSFGSHFWMALLEGKKRWLLYPKQAAPLLYPIWPEGCH-DPVFEAELEAPDATQHPAALLARGFQCVLEAGDVLFVPAGCPHRVENLTDTLAVSCNYVDATNVGGALEALEDQALTDPGADALASALRGCD--SSLVRGQRGVPWKTLKTWPRD 1932
+++ LYL DW++P + C L K+PK+FAGD LQR A +G Y DSWPSLF+ P G S+ HVD+FGS+FWMAL EG KRW+ + K +LYP++ DPVF+ +L+ PD QHP L + +CVL+ G++LFVPAGCPHRVENL +LA+S N+VD +N E L +L D + L D S++ + W+ KTWP +
Sbjct: 297 DQDKLYLFDWNIPLH----CQELAAELKIPKYFAGDFLQRTA-QGSLYKDSWPSLFIAPAGLTSELHVDAFGSNFWMALFEGSKRWVFFDKDDVAMLYPMFSHPWSTDPVFQVDLQNPDLKQHPLLSLTQPIECVLQPGELLFVPAGCPHRVENLETSLAISGNFVDLSNFHLVKEELTLTSLIDERSAELLKQFSDPDFKSNMCSDIDHLSWEQFKTWPAE 513 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig84.19776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig84.19776.1 >prot_F-serratus_M_contig84.19776.1 ID=prot_F-serratus_M_contig84.19776.1|Name=mRNA_F-serratus_M_contig84.19776.1|organism=Fucus serratus male|type=polypeptide|length=617bp MPSGTFPEIARWWRRRQSRRCLGLNEDALVKSTNPRTLLLSVTRSEDGLDback to top mRNA from alignment at F-serratus_M_contig84:311956..323680- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig84.19776.1 ID=mRNA_F-serratus_M_contig84.19776.1|Name=mRNA_F-serratus_M_contig84.19776.1|organism=Fucus serratus male|type=mRNA|length=11725bp|location=Sequence derived from alignment at F-serratus_M_contig84:311956..323680- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig84:311956..323680- >mRNA_F-serratus_M_contig84.19776.1 ID=mRNA_F-serratus_M_contig84.19776.1|Name=mRNA_F-serratus_M_contig84.19776.1|organism=Fucus serratus male|type=CDS|length=3702bp|location=Sequence derived from alignment at F-serratus_M_contig84:311956..323680- (Fucus serratus male)back to top |