mRNA_F-serratus_M_contig839.19758.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig839.19758.1
Unique NamemRNA_F-serratus_M_contig839.19758.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: A0A6H5JZ36_9PHAE (PCI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ36_9PHAE)

HSP 1 Score: 571 bits (1471), Expect = 9.520e-195
Identity = 304/445 (68.31%), Postives = 346/445 (77.75%), Query Frame = 2
Query:  317 GEEDEWPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREFPTGRKGKGSLSDMPQFDQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQ---ELYARGITGEHHEFTAYRVLYYLYLQVSCSGGSKGLLKILQELPVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDFTPNGLEVACKTSCIDARGLDKDAPNSLL 1642
            G++  WP SLRRYL+RAF+ C KK G R  E LE+ALHR VTDAMAEN M T DWD++PLPS++ +KRERSP     R+R G           +K KKR   Q+E R   T RKGKGSLS MPQ DQ++L NRLERFD   R P S+S R     +DLAFQSK +VD+NG VD  AITIKGTSTKLEK+Y RLTQPPDPA+VRPQ ILE ++  IS +WAKGG+DY+YACSQLKAIRQD VVQRIKN FTV+VYEGHARIALQQGDLNEYNQCQTQLQ   ELYA G+ G   EFTAYRVLYYLYLQ SCSGGS GL KILQELP G+Q PA+ HAL VR+A++MT+YH FFSLY+ TPNLGQHIMQKLL  MRVEALR+I+KAYRPTIS++FVL EL+F   EDG  FL+ CGV FTPNG EVACK S +DA GLD DAPNSLL
Sbjct:    5 GDDGAWPSSLRRYLQRAFDKCDKKQGSRQHELLEKALHRKVTDAMAENTMLTKDWDNEPLPSLVASKRERSPPRGAGRNRQG-----------EKNKKRNHGQIEVRAAGTPRKGKGSLSKMPQVDQRRLSNRLERFDLGMRPPPSSSSR---PGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQARFELYACGLEGSQEEFTAYRVLYYLYLQTSCSGGSTGLQKILQELPAGEQAPAINHALRVRKAVAMTDYHLFFSLYKTTPNLGQHIMQKLLKTMRVEALRRIIKAYRPTISLSFVLGELIFDTDEDGVAFLQACGVIFTPNGAEVACKESSVDASGLDADAPNSLL 435          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: D7G4Q3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q3_ECTSI)

HSP 1 Score: 578 bits (1489), Expect = 2.700e-192
Identity = 304/442 (68.78%), Postives = 348/442 (78.73%), Query Frame = 2
Query:  317 GEEDEWPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREFPTGRKGKGSLSDMPQFDQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSCSGGSKGLLKILQELPVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDFTPNGLEVACKTSCIDARGLDKDAPNSLL 1642
            G++  WP SLRRYL+RAF+ C KK G +   +LE+ALHR VTDAMAEN M T DWD++PLPS++ +KRERSP     R+R G           +K KKR   Q+EAR   T RKGKGSLS MPQ DQ++L NRLERFD   R P S+S R   T +DLAFQSK +VD+NG VD  AITIKGTSTKLEK+Y RLTQPPDPA+VRPQ ILE ++  IS +WAKGG+DY+YACSQLKAIRQD VVQRIKN FTV+VYEGHARIALQQGDLNEYNQCQTQLQELYA G+ G   EFTAYRVLYYLYLQ SCSGGS GL KILQELP G+Q PA+ HAL VR+A++MT+YH FFSLY+ TPNLGQHIMQKLL  MRVEALR+I+KAYRPTIS++FVL EL+F   EDG  FL+ CGV FTPNG EVACK S +DA GLD DAPNSLL
Sbjct:  360 GDDGAWPSSLRRYLQRAFDKCDKKQGSKQHAQLEKALHRKVTDAMAENAMLTKDWDNEPLPSLVASKRERSPLRGAGRNRQG-----------EKNKKRNHGQIEARAAATPRKGKGSLSRMPQADQRRLSNRLERFDLGMRPPPSSSSR---TGNDLAFQSKPMVDDNGMVDWAAITIKGTSTKLEKDYLRLTQPPDPASVRPQSILEKSLENISAKWAKGGLDYIYACSQLKAIRQDCVVQRIKNAFTVQVYEGHARIALQQGDLNEYNQCQTQLQELYACGLEGSQEEFTAYRVLYYLYLQTSCSGGSTGLQKILQELPAGEQAPAINHALRVRKAVAMTDYHLFFSLYKTTPNLGQHIMQKLLKTMRVEALRRIIKAYRPTISLSFVLGELIFDTDEDGVAFLQACGVIFTPNGAEVACKESSVDASGLDADAPNSLL 787          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: A0A329SNP8_9STRA (SAC3_GANP domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SNP8_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.620e-81
Identity = 173/441 (39.23%), Postives = 256/441 (58.05%), Query Frame = 2
Query:  332 WPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREF------PTGRKGKGSLS-----DMPQFDQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSC-----SGGSKGLLKILQEL-PVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDFTPNG-LEVACKTSCI 1600
            WP +L  Y+KRAF  C    G   Q   + +L  ++T+A+  N + T +W ++PLP VL+     +P+ +  ++++G      G  G K         ++  +       P+ +K K +       ++ + D Q+ + R +RF  + +  +S     V T      +   V+ ++GD+DL A+ IKGTS  +EKEY RLT PP P+TVRP+P+L  A+  +  +W KG  DY+YACSQLK+IRQD  VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL ELY + I GE  EF AYR+LY +Y+ +       + G  G+  +L  + P  +  PA+AHAL VRQA++M +YHRFF LY   PN+  ++M  ++P +R+ ALR + KAYRPT+ V ++  EL    +  GK F+R+ G+ F       V  KTS I
Sbjct:    7 WPDALHNYVKRAFARCK---GAADQSITQNSLKELITNAIMTNSLWTKNWTAEPLP-VLVGD---TPA-AAMQTKMGMGGPMPGAAGHKFASSPSSSSLQPNQTFIPFKEPSSKKNKTNKRKHDGFEIQEADVQRKNQRRQRFHMTQQELKSLVTPEVDT------KKLQVLTQDGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLRKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNDFTVSVYETHARVALESGDINEFNQCQTQLHELYEKLIPGEAIEFLAYRILYCVYVSLQAKKGDSNAGQLGMYNVLGMVTPRLRTDPAIAHALAVRQAVAMNDYHRFFKLYVGAPNMAGYLMDVMVPAIRLSALRAMCKAYRPTLPVQYIRDELKLEGKA-GKAFIRQAGLAFVKGDKTRVDTKTSNI 432          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: A0A3M6VHK7_9STRA (SAC3_GANP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHK7_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.820e-79
Identity = 172/429 (40.09%), Postives = 243/429 (56.64%), Query Frame = 2
Query:  317 GEEDEWPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREFP----TGRKGKGSLSDMPQF-----DQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSC-----SGGSKGLLKILQEL-PVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDF 1558
            G   +WP SL  Y+KRAF  C    G   Q   + +L  ++T+A+  N + T +W ++PLP  +L     + +        GP     G +          F       P    +G K K +   +  F     D Q+   R ERF  + +  +S     V T      +   V+  +G++DL A+ IKGT   +EKEY RLT PP P+TVRP+P+L  A+  +  +WAKG  DY+YACSQLK+IRQD  VQ IKN FTV VYE HARIAL+ GD+NE+NQCQTQL ELY + I+GE  EF AYR+LY +Y+ +       + G  G+  +L  + P  + HPA+AHAL VRQA++M +YHRFF L+   PN+  ++M  ++P +R+ ALR + KAYRPTISV ++  EL    +  GK F+ + G+ F
Sbjct:  167 GSNPKWPDSLHHYVKRAFGRCK---GAADQAITQNSLKEVITNAIMTNSLWTRNWTAEPLP--VLVGDTAAAAMQTKVGMGGPTPGPHGNRFASSSPSNSSFSPNQGFVPLEDSSGTKKKTNKRKLDGFEIDGADVQRKHKRRERFHMTKQELKSLVTPEVDT------KKLQVLTLHGELDLAAMVIKGTCQTIEKEYLRLTSPPHPSTVRPEPVLRKALDLVKSKWAKGNHDYIYACSQLKSIRQDCTVQHIKNAFTVSVYETHARIALESGDINEFNQCQTQLHELYEKLISGEAIEFLAYRILYCVYVSLQSKKGDSNAGQLGMYNVLGLVTPKLRSHPAIAHALSVRQAVAMNDYHRFFKLFVGAPNMAGYLMDVMVPAIRLSALRAMCKAYRPTISVQYIRDELKLEGKA-GKAFIHQSGLAF 583          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: W2HLF3_PHYPR (SAC3_GANP domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2HLF3_PHYPR)

HSP 1 Score: 277 bits (708), Expect = 4.060e-79
Identity = 168/426 (39.44%), Postives = 251/426 (58.92%), Query Frame = 2
Query:  332 WPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREF------PTGRKGKGSLSDMPQF-----DQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSC-----SGGSKGLLKILQEL-PVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDF 1558
            WP +L  Y+KRAF  C    G   Q   + +L  ++T+A+  N + T +W ++PLP VL+     +P+ +  ++++G      G  G+K         +++ +       P+ +K K +      F     D Q+ + R +RF  + +  +S     V T      +   V+ ++GD+DL A+ IKGTS  +EKEY RLT PP P+TVRP+P+L  A+  +  +W KG  DY+YACSQLK+IRQD  VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL ELY + I GE  EF AYR+LY +Y+ +       + G  G+  +L  + P  +  P +AHAL VRQA++M +YHRFF LY + PN+  ++M  ++P +R+ ALR + KAYRPT+ V ++  EL    +  GK F+R+ G+ F
Sbjct:  179 WPDALHDYVKRAFARCK---GAADQSITQNSLKEMITNAIMTNSLWTKNWIAEPLP-VLVGD---TPA-AAMQTKMGMGGPMPGAAGQKFTPSPSSSSLQSNQIFIPFKEPSSKKNKANKRKHDGFEIQDADVQRKNQRRQRFHMTQQELKSLVTPEVDT------KKLQVLTQDGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDRDYIYACSQLKSIRQDCTVQHIKNAFTVSVYETHARVALESGDINEFNQCQTQLHELYEKLIPGEAIEFLAYRILYCVYVSLQAKKGDSNAGQLGMYNVLGMVTPRLRADPTIAHALRVRQAVAMNDYHRFFKLYVDAPNMAGYLMDVMVPAIRLSALRAMCKAYRPTLPVQYIRDELKLEGKA-GKAFIRQSGIAF 589          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: A0A2P4Y250_9STRA (Leukocyte receptor cluster member 8 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y250_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.280e-78
Identity = 169/426 (39.67%), Postives = 251/426 (58.92%), Query Frame = 2
Query:  332 WPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREF------PTGRKGKGSLS-----DMPQFDQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSC-----SGGSKGLLKILQEL-PVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDF 1558
            WP +L  Y+KRAF  C    G   Q   + +L  ++T+A+  N + T +W ++PLP VL+     +P+ +  ++++G      G  G +          +  +       P+G+K K +       +M   D  + + R +RF  + +  +S     V T      +   V+ + GD+DL A+ IKGTS  +EKEY RLT PP P+TVRP+P+L  A+  +  +W KG  DY+YACSQLK+IRQD  VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL ELY + I G+  EF AYR+LY +Y+ +       + G  G+  +L  + P  +  PA+AHAL VRQA++M +YHRFF LY + PN+  ++M  ++P +R+ ALR + KAYRPTISV ++  EL    +  GK+F+R+ G+ F
Sbjct:  172 WPDALHDYVKRAFARCK---GAADQSITQNSLKEMITNAIMTNSLWTKNWTAEPLP-VLVGD---TPA-AVMQTKIGMGGPMPGAAGNRLAPSPSNSSFQPNQGFVPFKEPSGKKNKMNKRKHDGLEMEDADLHRKNQRRQRFHMTQQELKSLVTPEVDT------KKLQVLTQEGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNAFTVLVYETHARVALESGDINEFNQCQTQLHELYEKLIPGQAVEFLAYRILYCVYVSLQAKKGDSNAGQLGMYNVLGLVTPKLRADPAIAHALAVRQAVAMNDYHRFFKLYVDAPNMAGYLMDVMVPAIRLSALRAMCKAYRPTISVQYIRDELKLEGKA-GKVFIRQSGLVF 582          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: G4Z6T6_PHYSP (SAC3_GANP domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z6T6_PHYSP)

HSP 1 Score: 272 bits (695), Expect = 2.360e-77
Identity = 168/439 (38.27%), Postives = 247/439 (56.26%), Query Frame = 2
Query:  332 WPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVL--------------------LAKRERSPSWS----RSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREFPTGRKGKGSLSDMPQFDQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSC-----SGGSKGLLKILQELPVG-QQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDF 1558
            WP +L  Y+KRAF  C    G   Q   + +L  ++T+A+  N + T +W ++PLP ++                     A R  +PS S    +S     P ++   ++ +   +K   F++EA                   D Q+ + R +RF  + +  +S     V T      +   V+ ++GD+DL A+ IKGTS  +EKEY RLT PP P+TVRP+P+L  A+  +  +W KG  DY+YACSQLK+IRQD  VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL ELY + I GE  EF AYR+LY +Y+ +       + G  G+  +L  +    +  PA+AHAL VRQA++M +YHRFF LY + PN+  ++M  ++P +R+ ALR + KAYRPT+ V ++  EL    +  GK F+R+ G+ F
Sbjct:  170 WPDALHDYVKRAFARCK---GAADQSITQNSLKEMITNAIMTNSLWTKNWTAEPLPVLVGDTPAAAMQAKVGMGGPMPGAANRFAAPSPSNGSFQSNRGFVPFKEPSAKKNKANKRKHDGFEIEA------------------ADVQRKNQRKQRFHMTQQELKSLVTPEVDT------KKLQVLTQDGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNEFTVAVYETHARVALESGDINEFNQCQTQLHELYEKLIPGEAIEFLAYRILYCVYVSLQAKKGDSNAGQLGMYHVLGMVTAKLRADPAIAHALAVRQAVAMNDYHRFFKLYVDAPNMAGYLMDVMVPAIRLSALRAMCKAYRPTLPVQYIRDELKLEGRA-GKAFIRQSGLAF 580          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: A0A0P1AEL5_PLAHL (Leucine permease transcriptional regulator n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEL5_PLAHL)

HSP 1 Score: 272 bits (695), Expect = 2.850e-77
Identity = 170/437 (38.90%), Postives = 245/437 (56.06%), Query Frame = 2
Query:  332 WPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREF--PTGRKGKGSLSDMPQF-----DQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSC-----SGGSKGLLKILQEL-PVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDFTPNG-LEVACKTSCI 1600
            WP +L  Y+KRAF  C    G   Q   + +L  ++T+A+  N + T +W ++PLP  +L     + +        GPV    G              +E  E   P+ RK KG       F     D Q+ D R +RF  + +      +     + D+  +   V+ + GD+DL A+ IKGTS  +EKEY RLT PP P+TVRP+P+L  ++  +  +W +G  DY+YACSQLK+IRQD  VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL ELY + I GE  EF AYR+LY +Y+ +       + G  G+  +L  + P  +   A+AHAL VRQA+++ +YHRFF LY   PN+  ++M  ++P +R+ ALR + KAYRP + V  + +EL    +  GK F+R+ G+ F     L V  K+S I
Sbjct:  179 WPDALHDYVKRAFARCK---GAADQTLTQNSLKEMITNAIMSNSLWTKNWTAEPLP--MLVGDTSATTMQIKMGTAGPVPAVAGCDHASSLSSNSTQPIENPEIKTPSRRKNKGIKRKNDGFVIENADLQRKDQRRQRFCMTQK------ELDRMVTPDVDTKKLQVLTQEGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKSLELVKSKWKQGDGDYLYACSQLKSIRQDCTVQHIKNEFTVSVYETHARVALESGDINEFNQCQTQLHELYEKLIPGEVTEFLAYRILYCVYVSLQSKKGDSNAGQLGMYNVLAMVTPSMRSESAIAHALDVRQAVALNDYHRFFKLYVGAPNMAGYLMDVMVPAIRLSALRAMCKAYRPALPVQHIRKELKLEGKA-GKAFIRQSGLAFVKGDKLRVDTKSSNI 603          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: H3GE42_PHYRM (SAC3_GANP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE42_PHYRM)

HSP 1 Score: 270 bits (690), Expect = 1.310e-76
Identity = 170/426 (39.91%), Postives = 246/426 (57.75%), Query Frame = 2
Query:  332 WPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEKKCKKRGRFQVEAREF------PTGRKGKGSLSDMPQF-----DQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYLQVSC-----SGGSKGLLKILQEL-PVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGVDF 1558
            WP +L  Y+KRAF  C    G   Q   + +L  ++T+A+  N + T +W ++PLP VL+         +  +S++G      G  G +          +  +       P+ +K K +      F     D  + + R +RF  + +  +S     V T      +   V+  +GD+DL A+ IKGTS  +EKEY RLT PP P+TVRP+P+L  A+  +  +W KG  DY+YACSQLK+IRQD  VQ IKN FTV VYE HAR+AL+ GD+NE+NQCQTQL ELY + I GE  EF AYR+LY +Y+ +       + G  G+  +L  + P  +  PA+AHAL VRQA++M +YHRFF LY + PN+  ++M  ++P +R+ ALR + KAYRPTISV ++  EL    +E GK F+R+ G+ F
Sbjct:  174 WPDTLHNYVKRAFARCK---GAADQAITQNSLKEMITNAIMANNLWTRNWAAEPLP-VLVG----DMPTAAMQSKIGMGGPMAGA-GHRVASSPSSSSFQPNQAFVPFKEPSAKKNKKNKRKHDGFEIGDADLHRKNQRRQRFHMTQQELKSLVTPEVDT------KKLQVLTLDGDLDLAAMVIKGTSQTVEKEYLRLTSPPHPSTVRPEPVLHKALELVKSKWKKGDHDYIYACSQLKSIRQDCTVQHIKNEFTVSVYEAHARVALESGDINEFNQCQTQLHELYEKLIPGEALEFLAYRILYCVYVSLQSKKGDSNAGQLGMYHVLGMVTPKLRGDPAIAHALAVRQAVAMNDYHRFFKLYVDAPNMAGYLMDVMVPAIRLGALRAMCKAYRPTISVQYIRDELKLVGKE-GKAFIRQSGLAF 583          
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Match: F0VZ33_9STRA (Leukocyte receptor cluster member 8 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ33_9STRA)

HSP 1 Score: 269 bits (687), Expect = 6.810e-76
Identity = 169/443 (38.15%), Postives = 247/443 (55.76%), Query Frame = 2
Query:  332 WPPSLRRYLKRAFETCTKKHGWRLQEELERALHRIVTDAMAENRMQTTDWDSKPLP--------------------SVLLAKRER--------SPSWSRSRSRLGPVRKQQGQQGEK--KCKKRGRFQVEAREFPTGRKGKGSLSDMPQFDQQKLDNRLERFDHSARSPRSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLTQPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQRIKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTAYRVLYYLYL-----QVSCSGGSKGLLKILQEL-PVGQQHPAVAHALHVRQAISMTNYHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRELLFSAQEDGKIFLRRCGV 1552
            WP SL+ Y+KRAF  C    G   Q   + AL  ++T+A+A+N + T DW S+PLP                    S +  K+ R         PS+    S   P     G   E        G  +   R     +K +G ++++     +++  + +R     +     +K+ + TS  +  +   V++  GD+DL A+TIKGT  K+EKEY RLT PP P+TVRP+ IL  A+  I  +W     DY+YACSQLK+IRQD  VQR+KN FTVKVYE HARIAL+ GD+NE+NQCQTQL ELY   I GE  EF AYR+LY +Y+     +   + G+ G+  +L  L P  +Q  A+AHA+HVR+AI++ +YH+FF L+   PN+  ++M  ++  +R+ ALR + KAYRP + + F+ RE      E G+ F++ CG+
Sbjct:  172 WPESLQDYVKRAFTRCK---GATDQAVTQNALKELITEAIAKNHLWTKDWISEPLPRLPYDVNIVKPNAEKSLPAASAVAMKKSRFHPISTPLCPSFRTPTSEQSPAIPNMGNTNENLPPAANPGSSKNNKRRKKNKQK-QGLVANLTNLTPEEIMRKTQRQQRFLKDQVEIAKQKIYTS--METKQSRVLNVEGDLDLDAMTIKGTCQKIEKEYLRLTSPPHPSTVRPEGILRKALDMIQTKWKNRSCDYIYACSQLKSIRQDCTVQRLKNIFTVKVYESHARIALESGDINEFNQCQTQLHELYGEPIQGEEIEFLAYRILYCIYVGLQAKKADSNTGTLGMYNVLCLLSPQLRQDKAIAHAMHVREAIALNDYHQFFKLHSEAPNMSGYLMNAMVTTVRLRALRIMCKAYRPHLCLDFIKREFKLVGLE-GRRFIKECGL 607          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig839.19758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ36_9PHAE9.520e-19568.31PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4Q3_ECTSI2.700e-19268.78PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A329SNP8_9STRA1.620e-8139.23SAC3_GANP domain-containing protein n=1 Tax=Phytop... [more]
A0A3M6VHK7_9STRA1.820e-7940.09SAC3_GANP domain-containing protein n=1 Tax=Perono... [more]
W2HLF3_PHYPR4.060e-7939.44SAC3_GANP domain-containing protein n=12 Tax=Phyto... [more]
A0A2P4Y250_9STRA1.280e-7839.67Leukocyte receptor cluster member 8 n=1 Tax=Phytop... [more]
G4Z6T6_PHYSP2.360e-7738.27SAC3_GANP domain-containing protein n=6 Tax=Phytop... [more]
A0A0P1AEL5_PLAHL2.850e-7738.90Leucine permease transcriptional regulator n=1 Tax... [more]
H3GE42_PHYRM1.310e-7639.91SAC3_GANP domain-containing protein n=1 Tax=Phytop... [more]
F0VZ33_9STRA6.810e-7638.15Leukocyte receptor cluster member 8 putative n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig839contigF-serratus_M_contig839:58528..63950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score533.5
Seed ortholog evalue8.5e-149
Seed eggNOG ortholog2880.D7G4Q3
Preferred nameLENG8
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
EggNOG free text desc.transcription, DNA-templated
EggNOG OGsKOG1861@1,KOG1861@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2510
Cds size1197
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932475.3707643-UTR-F-serratus_M_contig839:58527..589751622932475.3707643-UTR-F-serratus_M_contig839:58527..58975Fucus serratus maleUTRF-serratus_M_contig839 58528..58975 +
1690964326.9323132-UTR-F-serratus_M_contig839:58527..589751690964326.9323132-UTR-F-serratus_M_contig839:58527..58975Fucus serratus maleUTRF-serratus_M_contig839 58528..58975 +
1622932475.532924-UTR-F-serratus_M_contig839:63085..639501622932475.532924-UTR-F-serratus_M_contig839:63085..63950Fucus serratus maleUTRF-serratus_M_contig839 63086..63950 +
1690964327.0371063-UTR-F-serratus_M_contig839:63085..639501690964327.0371063-UTR-F-serratus_M_contig839:63085..63950Fucus serratus maleUTRF-serratus_M_contig839 63086..63950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932475.3833823-CDS-F-serratus_M_contig839:58975..590281622932475.3833823-CDS-F-serratus_M_contig839:58975..59028Fucus serratus maleCDSF-serratus_M_contig839 58976..59028 +
1690964326.9433787-CDS-F-serratus_M_contig839:58975..590281690964326.9433787-CDS-F-serratus_M_contig839:58975..59028Fucus serratus maleCDSF-serratus_M_contig839 58976..59028 +
1622932475.4009395-CDS-F-serratus_M_contig839:59213..593271622932475.4009395-CDS-F-serratus_M_contig839:59213..59327Fucus serratus maleCDSF-serratus_M_contig839 59214..59327 +
1690964326.9615707-CDS-F-serratus_M_contig839:59213..593271690964326.9615707-CDS-F-serratus_M_contig839:59213..59327Fucus serratus maleCDSF-serratus_M_contig839 59214..59327 +
1622932475.4177823-CDS-F-serratus_M_contig839:59536..598221622932475.4177823-CDS-F-serratus_M_contig839:59536..59822Fucus serratus maleCDSF-serratus_M_contig839 59537..59822 +
1690964326.9743078-CDS-F-serratus_M_contig839:59536..598221690964326.9743078-CDS-F-serratus_M_contig839:59536..59822Fucus serratus maleCDSF-serratus_M_contig839 59537..59822 +
1622932475.4325268-CDS-F-serratus_M_contig839:61732..618701622932475.4325268-CDS-F-serratus_M_contig839:61732..61870Fucus serratus maleCDSF-serratus_M_contig839 61733..61870 +
1690964326.9852533-CDS-F-serratus_M_contig839:61732..618701690964326.9852533-CDS-F-serratus_M_contig839:61732..61870Fucus serratus maleCDSF-serratus_M_contig839 61733..61870 +
1622932475.4482043-CDS-F-serratus_M_contig839:62041..621101622932475.4482043-CDS-F-serratus_M_contig839:62041..62110Fucus serratus maleCDSF-serratus_M_contig839 62042..62110 +
1690964326.9962723-CDS-F-serratus_M_contig839:62041..621101690964326.9962723-CDS-F-serratus_M_contig839:62041..62110Fucus serratus maleCDSF-serratus_M_contig839 62042..62110 +
1622932475.4705274-CDS-F-serratus_M_contig839:62357..627071622932475.4705274-CDS-F-serratus_M_contig839:62357..62707Fucus serratus maleCDSF-serratus_M_contig839 62358..62707 +
1690964327.0070162-CDS-F-serratus_M_contig839:62357..627071690964327.0070162-CDS-F-serratus_M_contig839:62357..62707Fucus serratus maleCDSF-serratus_M_contig839 62358..62707 +
1622932475.4933856-CDS-F-serratus_M_contig839:62898..630851622932475.4933856-CDS-F-serratus_M_contig839:62898..63085Fucus serratus maleCDSF-serratus_M_contig839 62899..63085 +
1690964327.017434-CDS-F-serratus_M_contig839:62898..630851690964327.017434-CDS-F-serratus_M_contig839:62898..63085Fucus serratus maleCDSF-serratus_M_contig839 62899..63085 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig839.19758.1prot_F-serratus_M_contig839.19758.1Fucus serratus malepolypeptideF-serratus_M_contig839 58976..63085 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig839.19758.1

>prot_F-serratus_M_contig839.19758.1 ID=prot_F-serratus_M_contig839.19758.1|Name=mRNA_F-serratus_M_contig839.19758.1|organism=Fucus serratus male|type=polypeptide|length=399bp
MAENRMQTTDWDSKPLPSVLLAKRERSPSWSRSRSRLGPVRKQQGQQGEK
KCKKRGRFQVEAREFPTGRKGKGSLSDMPQFDQQKLDNRLERFDHSARSP
RSASKRSVSTSDDLAFQSKVVVDENGDVDLGAITIKGTSTKLEKEYFRLT
QPPDPATVRPQPILELAMAKISGEWAKGGMDYVYACSQLKAIRQDLVVQR
IKNTFTVKVYEGHARIALQQGDLNEYNQCQTQLQELYARGITGEHHEFTA
YRVLYYLYLQVSCSGGSKGLLKILQELPVGQQHPAVAHALHVRQAISMTN
YHRFFSLYENTPNLGQHIMQKLLPPMRVEALRQIVKAYRPTISVAFVLRE
LLFSAQEDGKIFLRRCGVDFTPNGLEVACKTSCIDARGLDKDAPNSLL*
back to top

mRNA from alignment at F-serratus_M_contig839:58528..63950+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig839.19758.1 ID=mRNA_F-serratus_M_contig839.19758.1|Name=mRNA_F-serratus_M_contig839.19758.1|organism=Fucus serratus male|type=mRNA|length=5423bp|location=Sequence derived from alignment at F-serratus_M_contig839:58528..63950+ (Fucus serratus male)
TTTACGACGTTTTGGAGGTGTAGGAGATACTGTAGTAGCTTTGCAGCACT CTCTCTTACCAACCATTGCCGGATGCTATTAATAGCTACCCTTTTCGGGG CGGTGTTTGTACTCACTCATATCAGCCTTTCCTTGAATTTAGCCAGTAGG GTCGTCACTAAAGCAGCTTATAACATTGATACCACGTGGCCATCTGTCGC TGTGGCAGAAGCAAGAGGCCGACAGAAGCAGCGGGAAGAATGGGCAGCAC GCCAAGAAAGAGTCGGGTCTTGAAGTGAACGGCGTGGAGCCCGAGCATAA TCTGAAGAACCATCACGGAGAGGAGGACGAGTGGCCGCCGTCACTTAGGC GGTATCTTAAACGAGCGTTCGAAACTTGCACGAAAAAGCATGGATGGCGC CTACAAGAAGAGCTTGAGAGGGCACTCCATCGAATTGTTACTGATGCGAT GGCAGAGAATCGCATGCAGACAACAGATTGGGATAGTAAACCCTTGCCGA GGTGAAAACCGTACTTGGTCTTTATGGCCAACTGCACGTGCTTAATTAAG GCGTCATTGGTGCGTGCTGTGATTTTATCCCACGATAACGCCATCATAAC GATGCCTCGCCAACAAGAGAGCTGATATGGGAAATTACCGCTTTTCTGTT TTGTGCACATACATACTGTATTCTTGTCAATGGCAGCGTATTATTGGCCA AGAGAGAACGTTCTCCGTCTTGGTCGCGGTCGCGGTCGCGGTTAGGGCCC GTTCGAAAGCAACAAGGGCAACAAGGGGAAAAAAAGTGCAAGAAGCGTGG GTGAGTGCCGCCCAAAGGATTGCGTTTGCGAGAACCGTGTCGCGGTAGTG GTTGACAGGGAAGTAGAGCATCAAGACCATCCCAGCCGAAGCCTTTGACT TCGTATTGAGTATATATCTATACGTGCCGTAAACGTCTGCCGTGAACATT CAATGGGTCTTACGGCTACGCGCTGGCGCCGTCCCTCTTTTTCTCCCTGT GCTGAATAGACGCTTCCAAGTCGAGGCGCGTGAATTTCCAACGGGACGGA AAGGAAAAGGGTCGCTCTCGGACATGCCTCAATTTGATCAGCAAAAGCTG GATAATCGCCTCGAGAGGTTCGATCATAGCGCTCGCTCCCCGCGCTCAGC GTCAAAGCGATCGGTATCCACCAGTGATGACCTCGCTTTTCAGAGCAAGG TCGTCGTAGACGAGAATGGAGACGTTGATTTGGGTGCCATCACCATCAAG GGAACTTCGACAAAACTCGAGAAGGAATACTTTCGTCTCACACAGGTTTG TAAAGTCCTTGTCGTTACTGTACTGTACTGTACTGTACTGTATATTAAAC GTTTCACACGTGTTTCGTTTCTGCCGTTCAACCCAGTTAGTTACCTGCCC AATCATGATGTTTTTGCAGCAAGATTTTTTTTTGCGCCGCGTCTTGTGCG TGGAAAAACGAACCTCGATGGTGGTTGACAAGCCTTGTCAATCTGTAACT TGTTTGATGGCTGTTGGTATGGCGATCTAATAGTGCTGACACCCATCCGA TCCTAGACCCAATTTAAGAAAATTGAGCTGGATCCAGGTCCATTGTGTCC CTCGTATTTGTTTTGCTTGGTGTTCCTGCATGACGATTAATGCAAGTGTA CAGGATATCGGTGGATTTCTCCCCGACATGATAGTGTCAATCCTATATTA TTACCATCGGGGAACCCCATTAAATGCCATGAAGAGGTTTTGTCTTTGCA GCCTATGATCCCACCTAAACGTTTTGACGTTTTTCCCCCGTCTGGTGGAT CAATGATGATGATGATGATGATGATGATGATGATGACATCTCAGAACAGT ATAGTCTAGATGCGTTTGTTCAGATTTTTCTTTAAAAAACATAGATCTAA CGACGCAGATCGATTCCTTGTGCCCTGGCGTATCTGGTCTCAAAAAATAA CCACGTTATTCAGACTTGAAAAAAATGTAAGTTCGAATCTTGTCATGATG GTTCACTTTGTAGTTTCCGTACGTACAGTTGGCTTTAATATCAGAAACTT GATACTCCATACTCCCATAGATCGACCCGTGTAGAGGTGCTGAACTTGCA CCGAGATAAACCGAGGATAGAGCGTTACAATAGGCAACATGGCAGCATGG GTATTGTTGCATTTGTACAAGGTTGGATTTGTAACCTATAAATACTTCGA TATTACTATAATAGTACCCTATAAATATTACTGTATTTCTAGCTTATAGC TCTGTTACTTTAGCTGCTAGCCCGTTGGTTACATTGAATGGCCCCATAGG CAGATAGTGAGAGACAAAAAACAATGTTATTAACAGCCTTCCAGGTGTGT TATGTTACTGACACGAAGGACGTGGCATGTGATCTTTCATCAATCCAAAC AAACGCATGCTTGATCATATCAACTAGTCTTGTCCACGGTAATGTACGTA AATAAGCGGGAGGACCTGTACTTCACTCGAGATTGTTTGTCTGGGTATAA TGACTAGGTATAGTCTCTGTATCGTACGAAAACGTTAACGGACTGGATAT AGCAGTTGAATCGTGCGAAAAACTCCTCCTGCAGAAAACCAGTTTCATGA ACGAGGCCAAATTAATTATGTCATAGCGTCTTGTGTATGGTCACACATAT AGCAAGGATATGGATCAACCCGGTAAGGTTGCCAATCCTGCTCGTGGTCA GCTGAACAGGGAAAATAATATTCCCCTGTCCGCGTTCGTGCCTGAGAATT TGGTCTCGCGAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGTCTGCTCAT CTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGT TCCGCGGCGGCGTCCATATATTTATATTAAACCGCCATACGCCATCGGGT AAGTCCCAAGTTTATCGGGTCACGCAATTGCGTACCGATGGCATTCACTG CCGAGAGTCCGTCGGCACAGGGCCAGTAACCCTCAAGGTAGTTCCGAACG AGTGCTGCCTTAGCAGGTCACCATGGAGCAATTAATATACGCCTCTCTTT CCCACACCCACTATTGGTATGAAGTGGGCATGTTGGAAGTAACGGTGGCG GACGCTTGTTCCATCGCAGGTAACCCGCGACTTGGGGCAGCTTCTAATTC CTTCCCCTCCGCCAACGCATGGATCTACTGGCCACACCACCCATTGCTTG CGCAGCCTCCAGACCCGGCAACCGTTCGCCCGCAACCGATTCTTGAACTG GCCATGGCAAAAATCTCTGGCGAGTGGGCCAAGGGTGGGATGGACTACGT GTACGCTTGCTCTCAGCTGAAGGCCATCCGACAAGATCTTGTGGTGAGAG GAAGAATAACTAACTTGCCCAACTTACCCTCTGCACCTGTGTTCTGTTGA GCCGGATTGTTGCACCCGAGCGCACCACGCGCACCCCCTTGCTCTTGTTG TGCTTGTTGTTATCAACGTACTCATGAATACTCCATACACATACCCATGA ACATGCCTCATCAGGTACAGCGGATCAAGAATACCTTTACTGTGAAGGTT TACGAAGGACATGCACGTATCGCTCTTCAGCAGGTACTACGGTACTGTAA ATGCACGTGAATGCAAGCAGCTGAATTGTTGATATTGACTCTTGAGGTCC TTGGGGAGGGTGTTCGGGGGGCACCGTACAAAATGTTCTCGTGGTTTGTA ATTGGAGAGGTTATCACCTGCTGTTGCACGCAACTAAAGTCACCTTGATA CCATACGGTACGTCGTAAACTATACTCACATGAGTCTTGACAAAGTCTAA TGAAAGTTTGGTCTTTGGCGTATGTGACAGGGAGACCTGAACGAATACAA TCAGTGCCAGACACAGCTGCAGGAACTGTACGCTAGAGGGATCACGGGAG AACACCACGAATTCACGGCATACCGGGTCCTATACTACCTGTATCTACAA GTGAGCTGCTCTGGTGGATCTAAAGGGCTACTGAAAATTCTGCAGGAGTT GCCGGTCGGTCAACAGCACCCGGCAGTCGCGCACGCTCTGCATGTCCGAC AAGCCATATCGATGACGAATTACCATCGTTTTTTCTCGTTGTACGAGAAC ACCCCAAACTTGGGGCAGCACATCATGCAGAAGCTGCTACCTCCAATGCG TGTGGAGGCGTTGAGACAAATCGTCAAAGCGTAAGTGATATTAATAAGAG CTTTCTTCCGTGCATTCATGATAAGGTTTTGCTAGACACGAGGAGGAGCC TTCAAAGTACTTAAGTGTAGTGGATTTAAGATCTCGTTCTCGTTTCAGCG GGAGAGCCGACGTCAAACTCTCGTGTGACGGGCTGTACCCGCTTTCACCC GTTTTGTCCATGTGTCTGCAGGTATCGCCCAACGATATCGGTGGCTTTCG TACTGCGCGAGTTGCTCTTCAGTGCGCAGGAGGATGGGAAAATCTTCCTC AGAAGATGTGGTGTGGACTTCACTCCAAATGGTCTTGAAGTTGCTTGTAA GACTAGCTGCATTGATGCCCGCGGGCTCGATAAAGATGCACCAAATTCGC TCCTGTAATAAGAGAGTGAAATCTTCCGCAAAACAAATGCAATCCATCTT CGGGTCGTAAGATACCATTATGCTCATCGAGAAAACTTGGCGTCCAGATA CGTCCCTGTACCTTTGGAAATGTTAAAATCGATCTTGATAAAGGCACCCG TTATCTGTTCATCAGCCGAGTCAGATTTGCCGTAGTGTACGTCCTTTCCA CCTACGGGCGTTTTACGCTTCGAAGCTGATTGACACACACTGCCACTGCC ACTGCCGGGTTGTAAGGGTAGTAATGACGGTTGCTCCACTTTTGCGGGAG AAACCTGTTACATTTTTTCAAGCGGAAGGTATGGCGGAAGGCGTTTCCTC GTTGCAAGTACGTGCTGAAGCCTAACAGTCCTGTGCTTGGTATTAATAGT ACCGCTGACCGGTACTGTATTTTCCTTCTTTTCAACTTTTCAGTTGCACA ACAACGCTTAGAAACCAACGGTTTGACCGTGGTAATCGGGGCAGCTTATC AAAACCCGCATGTTACAGTACAGGTGGGAACTTTCCTTCAAGTAGAGCTA TTGATACAGTAGTAAGAGCGGCGTATTCGAACCAAAGGCGTAGTTCACAT TTGAGTTTACTTTTTTTAAAGATCTGAGCAAATTCAAACGTTCAACACAG TCCACACGTCTTTACGCAAGGGTTGTTGGTTGATATTTCAGTGCGGAGAC TTTCGTCGTCGTGTACTTGCAGATGCCGATTACATCACGTTGGATGTTTT CGCCAAAACTGTACTTTGGAATTCAGTTGGGTCAATTACCATGTAGGGAC AAAAAATACATAAAACGTTAGACTCTAGTCTGTACCAGGTACAGAGTTTT TAACTCTTCTCAAACAATTTAAC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig839:58528..63950+

>mRNA_F-serratus_M_contig839.19758.1 ID=mRNA_F-serratus_M_contig839.19758.1|Name=mRNA_F-serratus_M_contig839.19758.1|organism=Fucus serratus male|type=CDS|length=2394bp|location=Sequence derived from alignment at F-serratus_M_contig839:58528..63950+ (Fucus serratus male)
ATGGCAGAGAATCGCATGCAGACAACAGATTGGGATAGTAAACCCTTGCC
GAGATGGCAGAGAATCGCATGCAGACAACAGATTGGGATAGTAAACCCTT
GCCGAGCGTATTATTGGCCAAGAGAGAACGTTCTCCGTCTTGGTCGCGGT
CGCGGTCGCGGTTAGGGCCCGTTCGAAAGCAACAAGGGCAACAAGGGGAA
AAAAAGTGCAAGAAGCGTGGCGTATTATTGGCCAAGAGAGAACGTTCTCC
GTCTTGGTCGCGGTCGCGGTCGCGGTTAGGGCCCGTTCGAAAGCAACAAG
GGCAACAAGGGGAAAAAAAGTGCAAGAAGCGTGGACGCTTCCAAGTCGAG
GCGCGTGAATTTCCAACGGGACGGAAAGGAAAAGGGTCGCTCTCGGACAT
GCCTCAATTTGATCAGCAAAAGCTGGATAATCGCCTCGAGAGGTTCGATC
ATAGCGCTCGCTCCCCGCGCTCAGCGTCAAAGCGATCGGTATCCACCAGT
GATGACCTCGCTTTTCAGAGCAAGGTCGTCGTAGACGAGAATGGAGACGT
TGATTTGGGTGCCATCACCATCAAGGGAACTTCGACAAAACTCGAGAAGG
AATACTTTCGTCTCACACAGACGCTTCCAAGTCGAGGCGCGTGAATTTCC
AACGGGACGGAAAGGAAAAGGGTCGCTCTCGGACATGCCTCAATTTGATC
AGCAAAAGCTGGATAATCGCCTCGAGAGGTTCGATCATAGCGCTCGCTCC
CCGCGCTCAGCGTCAAAGCGATCGGTATCCACCAGTGATGACCTCGCTTT
TCAGAGCAAGGTCGTCGTAGACGAGAATGGAGACGTTGATTTGGGTGCCA
TCACCATCAAGGGAACTTCGACAAAACTCGAGAAGGAATACTTTCGTCTC
ACACAGCCTCCAGACCCGGCAACCGTTCGCCCGCAACCGATTCTTGAACT
GGCCATGGCAAAAATCTCTGGCGAGTGGGCCAAGGGTGGGATGGACTACG
TGTACGCTTGCTCTCAGCTGAAGGCCATCCGACAAGATCTTGTGCCTCCA
GACCCGGCAACCGTTCGCCCGCAACCGATTCTTGAACTGGCCATGGCAAA
AATCTCTGGCGAGTGGGCCAAGGGTGGGATGGACTACGTGTACGCTTGCT
CTCAGCTGAAGGCCATCCGACAAGATCTTGTGGTACAGCGGATCAAGAAT
ACCTTTACTGTGAAGGTTTACGAAGGACATGCACGTATCGCTCTTCAGCA
GGTACAGCGGATCAAGAATACCTTTACTGTGAAGGTTTACGAAGGACATG
CACGTATCGCTCTTCAGCAGGGAGACCTGAACGAATACAATCAGTGCCAG
ACACAGCTGCAGGAACTGTACGCTAGAGGGATCACGGGAGAACACCACGA
ATTCACGGCATACCGGGTCCTATACTACCTGTATCTACAAGTGAGCTGCT
CTGGTGGATCTAAAGGGCTACTGAAAATTCTGCAGGAGTTGCCGGTCGGT
CAACAGCACCCGGCAGTCGCGCACGCTCTGCATGTCCGACAAGCCATATC
GATGACGAATTACCATCGTTTTTTCTCGTTGTACGAGAACACCCCAAACT
TGGGGCAGCACATCATGCAGAAGCTGCTACCTCCAATGCGTGTGGAGGCG
TTGAGACAAATCGTCAAAGCGGAGACCTGAACGAATACAATCAGTGCCAG
ACACAGCTGCAGGAACTGTACGCTAGAGGGATCACGGGAGAACACCACGA
ATTCACGGCATACCGGGTCCTATACTACCTGTATCTACAAGTGAGCTGCT
CTGGTGGATCTAAAGGGCTACTGAAAATTCTGCAGGAGTTGCCGGTCGGT
CAACAGCACCCGGCAGTCGCGCACGCTCTGCATGTCCGACAAGCCATATC
GATGACGAATTACCATCGTTTTTTCTCGTTGTACGAGAACACCCCAAACT
TGGGGCAGCACATCATGCAGAAGCTGCTACCTCCAATGCGTGTGGAGGCG
TTGAGACAAATCGTCAAAGCGTATCGCCCAACGATATCGGTGGCTTTCGT
ACTGCGCGAGTTGCTCTTCAGTGCGCAGGAGGATGGGAAAATCTTCCTCA
GAAGATGTGGTGTGGACTTCACTCCAAATGGTCTTGAAGTTGCTTGTAAG
ACTAGCTGCATTGATGCCCGCGGGCTCGATAAAGATGCACCAAATTCGCT
CCTGTAAGTATCGCCCAACGATATCGGTGGCTTTCGTACTGCGCGAGTTG
CTCTTCAGTGCGCAGGAGGATGGGAAAATCTTCCTCAGAAGATGTGGTGT
GGACTTCACTCCAAATGGTCTTGAAGTTGCTTGTAAGACTAGCTGCATTG
ATGCCCGCGGGCTCGATAAAGATGCACCAAATTCGCTCCTGTAA
back to top