mRNA_F-serratus_M_contig837.19754.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig837.19754.1
Unique NamemRNA_F-serratus_M_contig837.19754.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: D8LI66_ECTSI (Similar to HemK methyltransferase family member 1 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI66_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 2.180e-113
Identity = 182/307 (59.28%), Postives = 212/307 (69.06%), Query Frame = 1
Query:    1 MCWLRAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIA----NAGTTPSA------CAASGDDPLRFLDVGSGTGAIGLALLNELPD-ATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFE--------------------ENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGF----GEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRLTFAEEGQ 816
            +C LRA QHVPVQYLVGEWDF+ L+ EM PP+LIPRPETEELVE+ILKWLR +V  A     A   P+A       ++S +  +RFLDVGSGTGA+GLALL ELP  A CVA+D QE AV LS+RNA R G+Q RYSC HA++ +                      E  G E      + DG+FDF+VSNPPYIP RDM  LP DVA HEDSVALDGGEDGLDVVR+IV  C RLL+KGG RQLWMEVDTSHPE +QRWLG     GEG    +  ++ GV +FEWM DMSQRPRFVRLTFAE+ +
Sbjct:   27 LCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAADAPAAGGDGADSSSSDESGMRFLDVGSGTGALGLALLGELPSGARCVAVDTQESAVRLSRRNAARTGLQARYSCFHAAVAELAPSEKGSVTTPAIDRPPRSSVEKGGREDL----DLDGSFDFVVSNPPYIPTRDMEGLPRDVADHEDSVALDGGEDGLDVVRDIVRLCPRLLRKGGPRQLWMEVDTSHPEAMQRWLGLEVGLGEGAGGSQECRARGVAKFEWMRDMSQRPRFVRLTFAEQDE 329          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A6H5KUS7_9PHAE (Methyltranfer_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS7_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 6.780e-111
Identity = 188/309 (60.84%), Postives = 216/309 (69.90%), Query Frame = 1
Query:    1 MCWLRAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSAC-----------------AASGDDP-LRFLDVGSGTGAIGLALLNELP-DATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDF---EENAGT----EHEKVVG---------NFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEG-QERVEGSQ---SHGVTRFEWMSDMSQRPRFVRLTFAEE 810
            +C LRA QHVPVQYLVGEWDF+ LS EM PP+LIPRPETEELVE+ILKWLR +V  A A    +A                  ++SGD+  +RFLDVGSGTGA+GLALL ELP  A CVA+D QE AV LS+RNA R G+Q RYSC HA++ +    E  + T    +  +  G         +FDG+FDF+VSNPPYIP RDM  LP DVA HEDSVALDGGEDGLDVVR+IV  C RLL+KGG RQLWMEVDTSHPE +QRWLG   G  E   GSQ   + GV +FEWM DMSQRPRFVRLTFAEE
Sbjct:  212 LCVLRAVQHVPVQYLVGEWDFYGLSLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAGXXXXXXXXXXXXXXXADSSSGDESGMRFLDVGSGTGALGLALLGELPLGARCVAVDTQESAVRLSRRNAARTGLQARYSCFHAAVAELAPRENGSATTPAIDRPQSSGVEKGGRGDLDFDGSFDFVVSNPPYIPTRDMGSLPRDVADHEDSVALDGGEDGLDVVRDIVRLCPRLLRKGGPRQLWMEVDTSHPEAMQRWLGLEVGLDEGAGGSQECRAQGVAKFEWMRDMSQRPRFVRLTFAEE 520          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A0M0JRK9_9EUKA (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JRK9_9EUKA)

HSP 1 Score: 223 bits (567), Expect = 7.770e-68
Identity = 126/261 (48.28%), Postives = 157/261 (60.15%), Query Frame = 1
Query:   13 RAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRL 795
            R  + VPVQY++G+WDFH+L+ EM PP LIPRPETEELVE +L+ L  + R    G   S+        +  LDVG GTGAIGLALLN LP+A CV ID+   A  LS+ NA+R G+  RY  +   + D    A     +        FD IVSNPPYIP+ DMA L P+VA HED+ AL GG DGLDVVRE++    RLL+  G R +W+EVDTSHP VI+RWLG            + G+    WM D   RPRF  +
Sbjct:   91 RRFERVPVQYILGDWDFHDLTLEMRPPVLIPRPETEELVEHVLEALGDDHRTGGRGARRSS-------DIDILDVGCGTGAIGLALLNRLPNARCVGIDICPTAHALSKANAERCGLSARYESL---LVDGGIAACDLAPR-------RFDVIVSNPPYIPRADMATLEPEVAWHEDAGALCGGSDGLDVVRELLLATPRLLRADGPRSIWLEVDTSHPPVIERWLG---------EQAALGLQMVRWMRDAYGRPRFCEI 325          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A0G4EHU7_VITBC (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHU7_VITBC)

HSP 1 Score: 216 bits (551), Expect = 6.270e-66
Identity = 120/265 (45.28%), Postives = 156/265 (58.87%), Query Frame = 1
Query:   22 QHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLK---KGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRLTFAE 807
            + +PVQY+VG WDFH++S + EPP LIPRPETEELVE+IL+ +R+ VR              G+  L  LDVG+GTGAIGLALL +LP A C AID+   AV L+  NA  + + DRY C+ A +  FE              D  +D IVSNPPYIP  ++  L P+V  +EDS ALDGG DG+  +R + SR    LK   +GG RQ+W+E D+SHPEV+Q  +   +G     G     V   +W  D+    RFVRL  AE
Sbjct:   61 RRMPVQYVVGRWDFHHISVKCEPPVLIPRPETEELVELILEEVRRSVR--------------GERALHLLDVGAGTGAIGLALLKQLPTARCTAIDLSPHAVRLASANAATLSLADRYKCLQADMLTFEPPD-----------DERYDLIVSNPPYIPTAEIPTLQPEVRDYEDSGALDGGADGMFFIRSLASRMAAFLKPHGQGGMRQVWLETDSSHPEVLQGAVAKRDGS----GDFGGRVVSMQWWRDLGGHSRFVRLDMAE 296          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A7S4C115_CHRCT (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C115_CHRCT)

HSP 1 Score: 216 bits (550), Expect = 3.370e-63
Identity = 119/260 (45.77%), Postives = 160/260 (61.54%), Query Frame = 1
Query:   28 VPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCI--HASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRLTF 801
            +PVQY++G+WDFH L+  +EPP LIPRPETEELVE++L   R         ++P++ A      L  LDVG G+GAIGLALL+++ DATC+ ID+ E AV L++RNA  + ++ RYS +     +  F E+  T            FD IVSNPPYIP+ DM  L P+VA  ED  AL GG+DGLDVVR+IV    RLL+ GG   +W+EVD SHP +++RWL  G+G          GV+    + D+  RPRF  L +
Sbjct:  249 MPVQYILGDWDFHELTLLVEPPVLIPRPETEELVELVLAAQR---------SSPASAA------LNLLDVGCGSGAIGLALLSQMDDATCIGIDISEKAVDLARRNAISLDLEGRYSAVLDAGGVASFAESEQTPR----------FDVIVSNPPYIPQADMESLEPEVAGFEDRRALCGGDDGLDVVRQIVHAAPRLLRSGGQGTIWLEVDPSHPPLLERWLNGGDGD--------LGVSFVRSVEDLYGRPRFCVLQY 475          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: R1FNS3_EMIHU (HemK methyltransferase family member 1 n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FNS3_EMIHU)

HSP 1 Score: 201 bits (511), Expect = 9.720e-61
Identity = 122/276 (44.20%), Postives = 159/276 (57.61%), Query Frame = 1
Query:    1 MCWLRAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRLTFAEEGQGGVK 828
            MC  R A+  PVQY++G+WDF +L+ E+ PP LIPRPETE LVE++                    A +  D   FLDVG GTGAIGLALL+ LP A CV IDV   A  L+ RNA+  G+ DRYS   A+  D    A    ++        FD +VSNPPYIP+ D  +L P+VA HED  AL GG+DGLDVVRE++    RLL++GG R +W+EVD SHP +I+ WL        +E      + R EW  D+  R RF  + +    +GGV+
Sbjct:    1 MCARRLARE-PVQYILGDWDFMDLTLEVRPPVLIPRPETEGLVELV--------------------AQAHGDAAAFLDVGCGTGAIGLALLSRLPAARCVGIDVSASAAALAARNAELCGLDDRYS---AAAVDGGVAAWRPSDQ-------RFDVVVSNPPYIPRADYEQLEPEVAGHEDERALCGGDDGLDVVREVLLAAPRLLRQGGPRAVWLEVDPSHPPLIEAWLRDARPDLGME------LARAEW--DVFGRLRFCEVRW----RGGVE 233          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A835YWT7_9STRA (PrmC_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWT7_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.650e-59
Identity = 127/286 (44.41%), Postives = 163/286 (56.99%), Query Frame = 1
Query:    1 MCWLRAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTG-------------AIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGE-DGLDVVREIVSRCQRLL---KKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRLTFAE 807
            +C LRA + +P+QY++GEWD+H+L+  + PP LIPRPETE+LVE +L WLR+             C       LRFLDVGSGTG             AIGLALLN LP A CVA DV   AV LS  NA +VGV DRY+C+ +  +  +               G F FIVSNPPYIP+RDMA L  DV   ED  AL GG  DGL VVRE+V++   LL    +GG R +W+EVD+SHP ++++W G G             +   EW  D+   PR+V+L  A+
Sbjct: 1115 LCRLRATR-MPLQYIMGEWDWHDLALLVRPPVLIPRPETEDLVERVLDWLRR------------TCPERERTALRFLDVGSGTGEHQSEPSVEQCCSAIGLALLNRLPGAMCVACDVSADAVRLSLENASKVGVADRYACVLSPASSLQPPPPG----------GAFHFIVSNPPYIPQRDMAGLDEDVRGFEDWGALCGGAGDGLGVVREVVTKAPSLLLPTSEGGLRHIWLEVDSSHPPLMEQWQGQGL------------IEECEWFRDLGGHPRYVKLKLAD 1365          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A7S4NLJ6_9EUKA (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NLJ6_9EUKA)

HSP 1 Score: 193 bits (490), Expect = 2.820e-56
Identity = 110/254 (43.31%), Postives = 152/254 (59.84%), Query Frame = 1
Query:    1 MCWLRAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSH----GVTRF 750
            MC  R  + VPVQY++G+WDFH L+  + PP LIPRPETE+LVE++L+                A  A+   PLRFLDVG G+GAIGLALL+++  A CV +D++  A  L+ RNA+ +G+  RY  +  +        G  H        G FD IVSNPPYIPK DMA L P+V  HED  AL GG DGLDVVR+++      L++ G R +W+EVD SHP +I++ +   + +  ++  +SH    G+ RF
Sbjct:  102 MCGQRL-RRVPVQYILGDWDFHELTLSVAPPVLIPRPETEQLVELVLE----------------AHGAARAAPLRFLDVGCGSGAIGLALLHKMQRADCVGLDIRSEATELATRNAEALGLAARYRAVLVA-------GGIAH--FPSGESGAFDVIVSNPPYIPKADMATLEPEVVDHEDEGALCGGADGLDVVRQLLVAAPMQLRRDGPRAIWLEVDPSHPPLIEQIVTVEQPELGLDFVRSHDDQFGLLRF 329          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A2B4RYK0_STYPI (Peptide chain release factor N(5)-glutamine methyltransferase n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RYK0_STYPI)

HSP 1 Score: 191 bits (484), Expect = 2.480e-55
Identity = 103/257 (40.08%), Postives = 145/257 (56.42%), Query Frame = 1
Query:   28 VPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRLT 798
            VPVQY++GEW+F +L+  M+PP  IPRPETEEL++++ +   Q+               +G D   FL++G G+GAI L+LL E    TCVAID  + AV L++ NA R  V DR   +HA +       G+            FD I+SNPPYIP +DMA L P+++ +ED  AL GG DGLDV+R+I+     LLK G    +W+EVD SHP++I  W+   E           G+      +D ++RPRF  +T
Sbjct:  116 VPVQYIIGEWEFRHLTLAMKPPVFIPRPETEELIDLVAEHHVQD--------------ETGGDSFSFLEIGCGSGAICLSLLTEFSKTTCVAIDKNKAAVNLTRNNANRCNVSDRIELLHADLQSVLPLLGSRK----------FDAIISNPPYIPAKDMALLQPEISRYEDEHALCGGPDGLDVIRDILRISPVLLKPGRRSSVWLEVDISHPKLIDEWISGNE----------LGLNYSATFNDFTRRPRFCHIT 338          
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Match: A0A7S0ZCD0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCD0_9RHOD)

HSP 1 Score: 187 bits (475), Expect = 3.930e-55
Identity = 105/267 (39.33%), Postives = 153/267 (57.30%), Query Frame = 1
Query:    1 MCWLRAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWLRQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCVAIDVQEPAVMLSQRNAQRVGVQ--DRYSCIHASITDFEENAGTEHEKVVGNFDGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVSRCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRFEWMSDMSQRPRFVRL 795
            +C  R     P+QYL+GEWDF+N+S  + PP LIPRPETEELV+ ++K    +              A    P  F+DVG G+GAIGLALL   P++    ID+ + AV L+Q+NA ++G +   R   +  S+ +F  +     E V+       D IVSNPPYIP++DM +L  +V  HED  AL GG DGLDVVR  +    ++ ++G   ++WMEVD SHP ++++W+         E ++SH V   +  +D++   RFVRL
Sbjct:    9 LCARRIETRTPIQYLLGEWDFYNISLSVSPPVLIPRPETEELVDSLVKHYNGK-------------NADRQIPRHFVDVGCGSGAIGLALLRAWPESKATLIDISDEAVNLTQKNAAQLGPEIFGRCEIVKCSVDEFRSD-----ESVLD----VVDLIVSNPPYIPRKDMDDLEDEVLKHEDFRALCGGNDGLDVVRACIRNASKIARQGA--EIWMEVDPSHPALMRKWI--------EESTESHSVEWLDSWTDLNNFDRFVRL 243          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig837.19754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI66_ECTSI2.180e-11359.28Similar to HemK methyltransferase family member 1 ... [more]
A0A6H5KUS7_9PHAE6.780e-11160.84Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A0A0M0JRK9_9EUKA7.770e-6848.28Peptide chain release factor N(5)-glutamine methyl... [more]
A0A0G4EHU7_VITBC6.270e-6645.28Peptide chain release factor N(5)-glutamine methyl... [more]
A0A7S4C115_CHRCT3.370e-6345.77Peptide chain release factor N(5)-glutamine methyl... [more]
R1FNS3_EMIHU9.720e-6144.20HemK methyltransferase family member 1 n=1 Tax=Emi... [more]
A0A835YWT7_9STRA1.650e-5944.41PrmC_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S4NLJ6_9EUKA2.820e-5643.31Peptide chain release factor N(5)-glutamine methyl... [more]
A0A2B4RYK0_STYPI2.480e-5540.08Peptide chain release factor N(5)-glutamine methyl... [more]
A0A7S0ZCD0_9RHOD3.930e-5539.33Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig837contigF-serratus_M_contig837:213320..214210 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.7
Seed ortholog evalue3.9e-92
Seed eggNOG ortholog2880.D8LI66
Preferred nameHEMK1
KEGG rclassRC00003,RC03279
KEGG koko:K02493
KEGG ReactionR10806
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.hemK methyltransferase family member 1
EggNOG OGsCOG2890@1,KOG2904@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-26_005390.1
EC2.1.1.297
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03012
Exons2
Model size837
Cds size837
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932474.81688-CDS-F-serratus_M_contig837:213319..2137191622932474.81688-CDS-F-serratus_M_contig837:213319..213719Fucus serratus maleCDSF-serratus_M_contig837 213320..213719 -
1690964326.705009-CDS-F-serratus_M_contig837:213319..2137191690964326.705009-CDS-F-serratus_M_contig837:213319..213719Fucus serratus maleCDSF-serratus_M_contig837 213320..213719 -
1622932474.8843408-CDS-F-serratus_M_contig837:213773..2142101622932474.8843408-CDS-F-serratus_M_contig837:213773..214210Fucus serratus maleCDSF-serratus_M_contig837 213774..214210 -
1690964326.7231793-CDS-F-serratus_M_contig837:213773..2142101690964326.7231793-CDS-F-serratus_M_contig837:213773..214210Fucus serratus maleCDSF-serratus_M_contig837 213774..214210 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig837.19754.1prot_F-serratus_M_contig837.19754.1Fucus serratus malepolypeptideF-serratus_M_contig837 213320..214210 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig837.19754.1

>prot_F-serratus_M_contig837.19754.1 ID=prot_F-serratus_M_contig837.19754.1|Name=mRNA_F-serratus_M_contig837.19754.1|organism=Fucus serratus male|type=polypeptide|length=279bp
MCWLRAAQHVPVQYLVGEWDFHNLSFEMEPPSLIPRPETEELVEIILKWL
RQEVRIANAGTTPSACAASGDDPLRFLDVGSGTGAIGLALLNELPDATCV
AIDVQEPAVMLSQRNAQRVGVQDRYSCIHASITDFEENAGTEHEKVVGNF
DGTFDFIVSNPPYIPKRDMAELPPDVAAHEDSVALDGGEDGLDVVREIVS
RCQRLLKKGGSRQLWMEVDTSHPEVIQRWLGFGEGQERVEGSQSHGVTRF
EWMSDMSQRPRFVRLTFAEEGQGGVKGS*
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mRNA from alignment at F-serratus_M_contig837:213320..214210-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig837.19754.1 ID=mRNA_F-serratus_M_contig837.19754.1|Name=mRNA_F-serratus_M_contig837.19754.1|organism=Fucus serratus male|type=mRNA|length=891bp|location=Sequence derived from alignment at F-serratus_M_contig837:213320..214210- (Fucus serratus male)
ATGTGCTGGCTCAGAGCGGCTCAACATGTACCGGTTCAGTATCTGGTTGG GGAGTGGGACTTCCACAATCTCTCCTTCGAGATGGAACCGCCGTCGTTGA TCCCGCGCCCCGAGACGGAAGAGCTGGTTGAGATCATTCTTAAATGGTTG CGCCAAGAGGTTCGAATCGCTAATGCAGGTACTACTCCTAGCGCTTGCGC TGCCAGCGGCGACGATCCTCTACGCTTCCTCGACGTCGGATCGGGGACAG GAGCGATCGGGCTTGCTCTTCTCAACGAGCTCCCTGACGCAACATGTGTG GCGATCGACGTGCAAGAGCCCGCCGTGATGCTATCCCAACGAAACGCTCA GCGTGTGGGGGTTCAGGACCGGTACTCATGCATACACGCTTCTATTACCG ACTTTGAAGAAAACGCAGGGACAGAGCATGAAAAAGTGTCGCAAGCCGAC CGAGAGCGAAATTCTTCGCAACGCAACAAGGATCCAGGCAGGGTTGGGAA TTTCGACGGCACATTCGACTTCATCGTCAGCAATCCGCCATACATACCCA AGAGAGACATGGCAGAACTGCCTCCTGACGTTGCTGCGCATGAGGATAGT GTTGCACTCGATGGGGGCGAAGACGGGCTGGACGTTGTGCGCGAGATCGT TAGTAGGTGTCAACGATTGCTCAAGAAAGGTGGTTCACGGCAGTTGTGGA TGGAAGTCGACACCTCCCACCCCGAGGTCATTCAGCGATGGTTGGGCTTT GGGGAAGGCCAAGAGCGGGTAGAGGGGAGCCAATCGCACGGAGTGACGAG GTTCGAGTGGATGAGTGACATGTCGCAGCGCCCACGATTCGTGCGGCTTA CGTTTGCCGAGGAAGGCCAAGGGGGTGTGAAAGGCAGTTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig837:213320..214210-

>mRNA_F-serratus_M_contig837.19754.1 ID=mRNA_F-serratus_M_contig837.19754.1|Name=mRNA_F-serratus_M_contig837.19754.1|organism=Fucus serratus male|type=CDS|length=1674bp|location=Sequence derived from alignment at F-serratus_M_contig837:213320..214210- (Fucus serratus male)
ATGTGCTGGCTCAGAGCGGCTCAACATGTACCGGTTCAGTATCTGGTTGG
GGAGTGGGACTTCCACAATCTCTCCTTCGAGATGGAACCGCCGTCGTTGA
TCCCGCGCCCCGAGACGGAAGAGCTGGTTGAGATCATTCTTAAATGGTTG
CGCCAAGAGGTTCGAATCGCTAATGCAGGTACTACTCCTAGCGCTTGCGC
TGCCAGCGGCGACGATCCTCTACGCTTCCTCGACGTCGGATCGGGGACAG
GAGCGATCGGGCTTGCTCTTCTCAACGAGCTCCCTGACGCAACATGTGTG
GCGATCGACGTGCAAGAGCCCGCCGTGATGCTATCCCAACGAAACGCTCA
GCGTGTGGGGGTTCAGGACCGGTACTCATGCATACACGCTTCTATTACCG
ACTTTGAAGAAAACGCAGGGACAGAGCATGAAAAAGTATGTGCTGGCTCA
GAGCGGCTCAACATGTACCGGTTCAGTATCTGGTTGGGGAGTGGGACTTC
CACAATCTCTCCTTCGAGATGGAACCGCCGTCGTTGATCCCGCGCCCCGA
GACGGAAGAGCTGGTTGAGATCATTCTTAAATGGTTGCGCCAAGAGGTTC
GAATCGCTAATGCAGGTACTACTCCTAGCGCTTGCGCTGCCAGCGGCGAC
GATCCTCTACGCTTCCTCGACGTCGGATCGGGGACAGGAGCGATCGGGCT
TGCTCTTCTCAACGAGCTCCCTGACGCAACATGTGTGGCGATCGACGTGC
AAGAGCCCGCCGTGATGCTATCCCAACGAAACGCTCAGCGTGTGGGGGTT
CAGGACCGGTACTCATGCATACACGCTTCTATTACCGACTTTGAAGAAAA
CGCAGGGACAGAGCATGAAAAAGTGGTTGGGAATTTCGACGGCACATTCG
ACTTCATCGTCAGCAATCCGCCATACATACCCAAGAGAGACATGGCAGAA
CTGCCTCCTGACGTTGCTGCGCATGAGGATAGTGTTGCACTCGATGGGGG
CGAAGACGGGCTGGACGTTGTGCGCGAGATCGTTAGTAGGTGTCAACGAT
TGCTCAAGAAAGGTGGTTCACGGCAGTTGTGGATGGAAGTCGACACCTCC
CACCCCGAGGTCATTCAGCGATGGTTGGGCTTTGGGGAAGGCCAAGAGCG
GGTAGAGGGGAGCCAATCGCACGGAGTGACGAGGTTCGAGTGGATGAGTG
ACATGTCGCAGCGCCCACGATTCGTGCGGCTTACGTTTGCCGAGGAAGGC
CAAGGGGGTGTGAAAGGCAGTTAAGGTTGGGAATTTCGACGGCACATTCG
ACTTCATCGTCAGCAATCCGCCATACATACCCAAGAGAGACATGGCAGAA
CTGCCTCCTGACGTTGCTGCGCATGAGGATAGTGTTGCACTCGATGGGGG
CGAAGACGGGCTGGACGTTGTGCGCGAGATCGTTAGTAGGTGTCAACGAT
TGCTCAAGAAAGGTGGTTCACGGCAGTTGTGGATGGAAGTCGACACCTCC
CACCCCGAGGTCATTCAGCGATGGTTGGGCTTTGGGGAAGGCCAAGAGCG
GGTAGAGGGGAGCCAATCGCACGGAGTGACGAGGTTCGAGTGGATGAGTG
ACATGTCGCAGCGCCCACGATTCGTGCGGCTTACGTTTGCCGAGGAAGGC
CAAGGGGGTGTGAAAGGCAGTTAA
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