mRNA_F-serratus_M_contig832.19718.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 451 bits (1159), Expect = 2.050e-141 Identity = 260/601 (43.26%), Postives = 370/601 (61.56%), Query Frame = 1
Query: 1 PSPVSHPQHSGQDLAVKLWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYRVKHTLEEAIEQWIDTIQSRVPGAVVLLVGTHKDALL-NADLCEERMENLHQDVEDCNSRLREELEARRQSA------------LNNRSDQVVRVVNGDDVFLLDCKSSGEDEINRLRSFIATVAYSS--DYSFPSVESQMPTPWVYAFLTLEAIRCGADLRGISGEMSAVLDRIEHGDPEKTKYYVFFDDALVLF-KDLWKAMDIENTRSERADE---VFSNAIELNEAQGLILITNRDG---SLDETYRG--------QVVLHVDPVRFADVVRRIADIRLVDLHNNSKITRALGRFAREKGIRFAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKEAPLLEMMEEDVQAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYKKHLVLIYECKISERQSSIVCCAKGD-ANNEIAGSILADVEEEVDSLIRDPRYGFPGIELCRDGNMIKQIVDQGDELKKLLQRLEKDLENHMNVR 1710
P P + +L V LWDFAGQRAYYDTHQ+FLT AL++LVVD+ TY + E+A+EQW++ +Q+RVPG+VVLLVGTH D NA C R + +DVE+ +RLR E ++ + N Q +RVV +++ LD SS +I+ L+ + +AY+ YSFPSV S +P P++ A TLEA+R GADLRG AV R+ GDP+K + +V F +A+ LF K + RA E +F A++ +EA G IL+T DG S ++ G +++HV+P RFAD+VRR+ D+RLVD +K+ A+ + + L+ QH RF AGEVSK++LKFLWL R+MDLG+A++EAP LEM E DV+ MVGSL+D+R M+ +R +PDRYVV +CLP+ G V G +LEL +GSA++S L++ G+ +PPGL+PRLLAWCGRGEGRI ACW+ G CF +K HLVL+YE + + S I C A+G+ ++++ A + L D+ ++V LI D +YGFPG+ L R G + ++ + K LL+R+ L + MNV+
Sbjct: 402 PGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYTEGQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETELGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPM-LLTLTDQHKRFVKAGEVSKDYLKFLWL-RDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFKNHLVLLYEVRAIDGTSWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLVRSGESEETVISSDSDHKALLERIVDVLRDQMNVK 1000
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 3.090e-139 Identity = 256/607 (42.17%), Postives = 360/607 (59.31%), Query Frame = 1
Query: 1 PSPVSHPQHSGQDLAVKLWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYRVK-HTLEEAIEQWIDTIQSRVPGAVVLLVGTHKDALLNADLCEER--MENLHQDVEDCNSRLREELEARRQ----SALNNRSDQVVRVVNGDDVFLLDCKSSGEDEINRLRSFIATVAYS--SDYSFPSVESQMPTPWVYAFLTLEAIRCGADLRGISGEMSAVLDRIEHGDPEKTKYYVFFDDALVLFKDLWKAMDIENTRSERADEVFSNAIELNEAQGLILITNRDGS-----LDETYRGQVVLHVDPVRFADVVRRIADIRLVDLHNNSKITRALGRFAREKGIRFAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKE--APLLEMMEEDVQAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTY-KKHLVLIYECKISERQSSIVCCAKGDANNEIAGSILADVEEEVDSLIRDPRYGFPGIELCRDGNMIKQIVDQGDELKKLLQRLEKDLENHMNVRIDQLEKQSERIADGINARLK 1770
P P + +L VKLWDFAGQRAYYDTHQ+FLT AL++LVVD+ Y H+ E+A+EQW+D +Q+RVPG+VVLLVGTH D + C +R M+ + ++ + R R+E ++R Q +R+V D++ L+ SG +L+ VAY YSFPSV S++P P + A TLEA+R GA LRG G+ + V+ R++ ++ + ++ F +AL LF ++ + + ++ F AI L+E QG IL+T DG + +V+HV+P FAD++RRI D+RL+D K+ + R+ AELS+QH RF +AGEVSK ++KFLW R+++LG A+ AP EM EE + MV SL+ +R MF +R + D Y+V +CLPDHVGC V LL L VG A+FS LQ+ G + +PPGLIPRLLAWC +G+ RIT CW+ G CF + +KHLVL+YE + +S I C A G A+NE AG L DV E+ L+ DP+YGFPGI L DG + Q EL KLL R +L++HMNV +L ++S IA G+ L+
Sbjct: 267 PGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPADCSKRDIMDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVI---KRQSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNK-----DHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRKHLVLLYEHRKEAGRSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLR 865
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 431 bits (1108), Expect = 1.770e-136 Identity = 255/621 (41.06%), Postives = 358/621 (57.65%), Query Frame = 1
Query: 1 PSPVSHPQHSGQDLAVKLWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYRVKHTLEEAIEQWIDTIQSRVPGAVVLLVGTHKDALL-NADLCEERMENLHQDVEDCNSRL-----------REELEARRQSALNNRSDQVVRVVNGDDVFLLDCKSSGEDEINRLRSFIATVAYSS--DYSFPSVESQMPTPWVYAFLTLEAIRCGADLRGISGEMSAVLDRIEHGDPEKTKYYVFFDDALVLFKDLWKAMDIENT--------------------------RSERADEVFSNAIELNEAQGLILITNRDGS-LDETYRG----------QVVLHVDPVRFADVVRRIADIRLVDLHNNSKITRALGRFAREKGIRFAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKEAPLLEMMEEDVQAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYKKHLVLIYECKISERQSSIVCCAKGDANNEIAGSILADVEEEVDSLIRDPRYGFPGIELCRDGNMIKQIVDQGDELKKLLQRLEKDLENHMNVR 1710
P S +L V LWDFAGQRAYYDTHQ+FLT+ AL++LVVD+ Y H+ E+A+EQW+D +Q+RVPGAV+LLVGTH D NA C +R + +DVE R+ EL R N + +RVV +D+ LD SS ++I L+ + +AY+ YSF SV S +P P++ TLEA+R GADLRG G AV+ R+ GDP K + +V F +A+ L + + + R + +F AI+ +EA G IL+T DG + R +++HV+P RFAD+VRR+ D+RLVD K+ +A+ + + L+ QH RF AGEVSK++LKFLWL R+M+LGQA+ EAP LEM E DV MVGSL+D+R M+ +R +PDRYVV +CLP+ G EV G +LEL GSA++S L++ G+ +PPGL+PRLLAWCGRGEG I ACW+ G CF +K H+VL+YE + + S I C A+G +E A + L D+ ++V+ LI D +YGFPG+ L R G + +V + + L++R+ L + MNV+
Sbjct: 107 PGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAEGHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPM-LLTLTDQHKRFVKAGEVSKDYLKFLWL-RDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFKNHMVLLYEVRDTAGNSWIECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGLGLIR-GESEEALVSSDGDHEALVKRIVNMLRDQMNVK 724
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 409 bits (1052), Expect = 1.820e-128 Identity = 244/608 (40.13%), Postives = 365/608 (60.03%), Query Frame = 1
Query: 7 PVSHPQHSGQDLAVKLWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYRVK-HTLEEAIEQWIDTIQSRVPGAVVLLVGTHKDALLNADLCEERME--------NLHQDVEDCNSRLREELEARRQ----SALNNRSDQVVRVVNGDDVFLLDCKSSGEDEINRLRSFIATVAYS--SDYSFPSVESQMPTPWVYAFLTLEAIRCGADLRGISGEMSAVLDRIEHGDPEKTKY-YVFFDDALVLFKDLWKAMDIENTRSERADEVFSNAIELNEAQGLILITNRDGS---LDETYRGQVVLHVDPVRFADVVRRIADIRLVDLHNNSKITRALGRFAREKGIRFAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKE-APLLEMMEEDVQAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYKKHLVLIYECKISERQSSIVCCAKGDANNEIAGSILADVEEEVDSLIRDPRYGFPGIELCRDGNMIKQIVDQGDELKKLLQRLEKDLENHMNVRIDQLEKQSERIADGINARLK 1770
P + +L VKLWDFAGQRAYYDTHQ+FLT AL++LVVD+ Y H+ E+A+EQW+D +Q+RVPG+VVLL+GTH D+ + C +R++ L+++ R+ +E +A +NR + +RVV ++ L+ SG LR I VAY YSFPSV +++P P + A TLEA+R G LRG GE + V R+ G + +V F +AL F ++ + ++ VF AI+L+E QG IL+T DG D +V+H++P FAD++RRI D+RL+D ++ + R+ +LS+QH RF +AGE+++ +++FLW R+++LG A+ AP LEM EED+ +V SL+D+R MF +R++ D Y+V +CLPDHVGC++ L+EL VG A+FS L+ G+ ++PPGLIPRLLAWCG+G+ RITACW+ G CF++K+HLVL+YE + + R + I C A G A++E A L DV E+ L+ D +YGFPG+ L G KQ V + L+ LL R +L+ +NV++++L ++ + IA G+ L+
Sbjct: 97 PANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDCFVKGELLPLYKNF--IMKRIGDECKAAADRGHAGVQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEMEDMASEEHLVIHMNPAWFADLIRRIVDVRLLD-PAQARQEKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNE-----DHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFKEHLVLLYEHRDAGR-AVIECHAMGSAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLR 695
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 325 bits (833), Expect = 2.160e-96 Identity = 217/619 (35.06%), Postives = 325/619 (52.50%), Query Frame = 1
Query: 1 PSPVSHPQHSGQDLAVKLWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYRVKHTLEEAIEQWIDTIQSRVPGAVVLLVGTHKDAL-LNADLCEERMENLHQ-------------------DVEDCNSRLREELEARRQSA------------LNNRSDQVVRVVNGDDVFLLDCKSSGEDEINRLRSFIATVAYSSDYSFPSVESQMPTPWVYAFLTLEAIRCGADLRGISGEMSAVLDRIEHGDPEKTKYYVFFDDALVLFK-----DLWKAMDIENTRSERADEVFSNAIELNEAQGLILITNRDG---SLDETYRG--------QVVLHVDPVRFADVVRRIADIRLVDLHNNSKITRALGRFAREKGIRFAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKEAPLLEMMEEDVQAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYKKHLVLIYECKISERQSSIVCCAKGDANNEIAGSILADVEEEVDSLIRDPRYGFPGIELCRDGNMIKQIVDQGDELKKLLQRLEKDLENHMNVRI 1713
P P + +L V LWDFAGQRAYYDTHQ+FLT AL++LVVD+ TY V + E+A+EQW++ +Q+RVPG+++LLVGTH D NA C R ++ + DV+D +R+R E ++ + A N Q +RVV +D+ L+ SS +I+ L+ + +AY+ GADLRG AV R+ G+P+K + +V F +A+ LF + + R +F A++ +EA G I +T DG S ++ G +++HV+P RFAD+VRR+ D+RLV +K+ A+ + L+ QH RF GEVSK++LKFLWL R+MDL +A++EAP LEM E DV+ MV SL+D+R M+ +R +PDRYVV +CLP+ G +V G +LEL G+A++S L++ +PPGL+PRLL+ C HLVL+YE + ++ S I C A+G+ +E A + L D+ ++VD LI D + FPG+ L R G + +V + K LL+R+ + MNV++
Sbjct: 147 PGPTNEGIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYEVGQSKEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNG---------------------------GADLRGSGSTREAVAQRLREGNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRSS-LLTLTDQHKRFIKTGEVSKDYLKFLWL-RDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS-----------------C-----HLVLLYEVRATDGTSWIECHARGNVFDESARTALKDIGDQVDELISDHKNRFPGLGLVRSGESEETVVYSDSDHKALLERIVDVQRDQMNVKL 714
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE) HSP 1 Score: 189 bits (480), Expect = 3.080e-50 Identity = 108/249 (43.37%), Postives = 152/249 (61.04%), Query Frame = 1
Query: 718 IENTRSERADE---VFSNAIELNEAQGLILITNRDGSLDETYRGQVVLHVDPVRFADVVRRIADIRLVDLHNNSKITRALGRFAREKGIRFAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKEAPLLEMMEEDVQAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYKKHLVLIYE 1455
+E T R DE +F AI+ E G IL+T DG+ +++HV+ RFAD++ K+ A+ + + L+ QH RF AGEVSK++LKFLWL R+M+LGQA++EAP LEM E DV+ MV S +DLR+++ +R +PDR VV +CLP+ G EV G++LEL SA++ L++ + +PPGL+PR LAWCGRGEGRI ACW+ G CF +K HL+L+ E
Sbjct: 13 VEKTTLCRDDEPRRIFLAAIKSQETHGAILLTGVDGA-------DLIIHVNLSRFADLL---------------KVKEAMEACPSVRPM-LLTLTDQHKRFVKAGEVSKDYLKFLWL-RDMELGQASQEAPRLEMSEADVEVMVDSFLDLRLVYRVRDGQHAFVPDRNVVASCLPNKAGPEVDPGNILELETASAIYLQKLKLVVAHAVPPGLVPRELAWCGRGEGRINACWKRGVCFAFKNHLMLLNE 237
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.790e-33 Identity = 138/585 (23.59%), Postives = 251/585 (42.91%), Query Frame = 1
Query: 40 LAVKLWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYRVK--------HTLEEAIEQWIDTIQSRVPGAVVLLVGTHKDALLNADLCEERMENLHQDVEDCNSRLREELEAR-------RQSALNNRSDQVVRVVNGDDVFLLDCKSSGED-------------------------------EINRLRSFIATVAYSSD----YSFPSVESQMPTPWVYAFLTLEAIRCGADLRGISGEMSAVLDRIEHGDPEKTKYYVFFDDALVLFKDLWKAMDIENTRSERADEVFSNAIELNEAQGLILITNRDGSLDETYRGQVVLHVDPVRFADVVRRIADIRLVDLHNNSK--ITRALGRFAREKGIRFAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKEAPLLEMMEEDVQAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQID---GSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYK----KHLVLIYECKISE-RQSSIVCCAKG-----DANNEIAGSILADVEEEVDSLIRDPRYGFPGI 1599
L V +WDFAGQ YY +HQ+FLTK AL++LVVD+ + + I W++ + RVPGA V LVG+H D + + D R H + + R + + A N Q +R ++ + ++ +D + LR +I A + ++FP+V+ + W+ A+ ++ ++ A V + A+ F+ K I + A +V A++ EA+G +L++ D D +LH+DP ++VRR+AD LVD + + + L +A+ +G+ A L H +C +G +++ +L+FLW+HR+++ P +++ + + +++V ++ L +M+ R D VV A L ++ + + + ++VL+I+ G PPG++ R LAW + CW+HG F+YK ++ V +YE ++ E Q V G A +L ++ + ++SL+ D YG+PG+
Sbjct: 331 LQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQMESEDA---RQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLKGTAPC-------------------------VLWSRAVEEFRR--KMSGIPPVAGD-AGKVLLRAMQHREAEGGVLLSLAD---DSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIE-----GPGPTVDLTDPEFESIVSTMERLLVMYTARD------ADNLVVPARLQEYG----------DQRIPDRLTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGL 860
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE) HSP 1 Score: 119 bits (299), Expect = 2.420e-26 Identity = 67/182 (36.81%), Postives = 97/182 (53.30%), Query Frame = 1
Query: 1165 MFPIRKDSGDDLPDRYVVGACLPDHVGCEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYKKHLVLIYECKISERQSSIVCCAKGDANNEIAGSILADVEEEVDSLIRDPRYGFPGIELCRDGNMIKQIVDQGDELKKLLQRLEKDLENHMNVR 1710
M+ +R +PDRYVV C P+ G V G + + L++ G+ +PPGL+PRLLAWCGRGEGR C + G KKHLVL+ E + + S I C +G+ +E G +L D + ++ L D +YGFPG+ L D GD+ K L++R++ L + NVR
Sbjct: 1 MYRVRDGHHAFVPDRYVVHYCFPNTDGRRVDPGKIFQ----------TLKLVGAHAVPPGLVPRLLAWCGRGEGRYKECCKRGLLLEIKKHLVLLIELRSTHGASWIECDMRGNLFDESPGKVLKDKDVQIHELFSDNKYGFPGLGLSYDEVSETDFDLDGDD-KALVERIKSILRDQTNVR 171
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 118 bits (296), Expect = 6.760e-24 Identity = 118/421 (28.03%), Postives = 194/421 (46.08%), Query Frame = 1
Query: 427 CKSSGEDE-INRLRSFIATVAYSS-DYSFPSVESQMPTPWVYAFLTLEAIRCGADLRGISGEMSAVLDRIEHGDPEKTKYYVFFDDALVLFKDLWKAMDIENTRSER----ADEV----FSNAIELNEAQGLILITNRDGSLDETYRGQVVLHVDPVRFADVVRRIADIRLVDLHNNSKITRALGRFAREKGIR---FAELSRQHARFCMAGEVSKNFLKFLWLHREMDLGQATKEAPLLEMMEEDV-QAMVGSLVDLRMMFPIRKDSGDDLPDRYVVGACLPDHVG---CEVTVGSLLELTVGSAMFSLVLQIDGSRNMPPGLIPRLLAWCGRGEGRITACWRHGGCFTYKK----HLVLIYECKISER----QSS---IVCCAKGDANNEIAGSILADVEEEVDSLIRDPRYGFPGIEL 1605
C S G D I RL +I VA +SFP+V + +P WV A +EA+ EK YV + DA+ F+ ++ E + ER +DE A++ EA+G ++++ RD S ++HVDP ++VRR+ D LVD +KI + L + R + + L HA F G +++++L+FLW+HR++++ A L ++D +MV +++ ++P + + D ++V A LP+H E ++G L E+ VG + L + P G+I R LA+ CW+HG +KK H VL+ E I + QS+ I C KG A +L +V E++ SL++D +G+PG+ L
Sbjct: 1479 CASLGLDNRIGRLSDWIIGVAPEKISFSFPAVATILPAAWVDAIAAVEALH-----------------------KEKGTPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQ---SDMIHVDPRWLIELVRRVTDHNLVDKKKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQL----DKDAFDSMVDTMIKYLFIYPSHGECSN-AEDCHIVPARLPEHGNDNILEESIG-LGEVVVGKTAWFL------RSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPGQSTFPAIAICVKGKTAE--AKGVLREVGEQLLSLLQDNIHGYPGLRL 1859
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Match: A0A5A9PN70_9TELE (Roc domain-containing protein n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PN70_9TELE) HSP 1 Score: 82.0 bits (201), Expect = 9.790e-13 Identity = 51/174 (29.31%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 52 LWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYRVKH--TLEEAIEQWIDTIQSRVPGAVVLLVGTHKDALLNADLCEERMENLHQDVEDCNSRLREELEARRQSALN--------NRSDQVVRVVNGD----DVFLLDCKSSGEDEINRLRSFIATVAYSSDYSFPSVESQMP 531
WDFAGQ YY+TH +F+T A IL +D+S+Y+ ++ + +E + WI I ++PG+VVLLVGTH D + + EE+ + + ++VE + L+ ++ + N ++ +Q+ R+ + D+ +DC +I L I + + +FP++E +P
Sbjct: 264 FWDFAGQEEYYNTHHVFITAEAFVILAIDLSSYQTENPQSFDEKVGFWIKNIHLKIPGSVVLLVGTHVDQCTDENEVEEKKKEIEENVEKMLKTHKSHLDQQKMNLQNKDNPSLYSDQINQIERLTEYNLKVLDLVAIDCTKP--QDIRLLHDHIKNTVLNKE-TFPNLEQTLP 434 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig832.19718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig832.19718.1 >prot_F-serratus_M_contig832.19718.1 ID=prot_F-serratus_M_contig832.19718.1|Name=mRNA_F-serratus_M_contig832.19718.1|organism=Fucus serratus male|type=polypeptide|length=603bp PSPVSHPQHSGQDLAVKLWDFAGQRAYYDTHQIFLTKYALYILVVDVSTYback to top mRNA from alignment at F-serratus_M_contig832:231050..233563- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig832.19718.1 ID=mRNA_F-serratus_M_contig832.19718.1|Name=mRNA_F-serratus_M_contig832.19718.1|organism=Fucus serratus male|type=mRNA|length=2514bp|location=Sequence derived from alignment at F-serratus_M_contig832:231050..233563- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig832:231050..233563- >mRNA_F-serratus_M_contig832.19718.1 ID=mRNA_F-serratus_M_contig832.19718.1|Name=mRNA_F-serratus_M_contig832.19718.1|organism=Fucus serratus male|type=CDS|length=3618bp|location=Sequence derived from alignment at F-serratus_M_contig832:231050..233563- (Fucus serratus male)back to top |