mRNA_F-serratus_M_contig832.19717.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: A0A412RVW1_9BACE (Uncharacterized protein n=2 Tax=Bacteroides cellulosilyticus TaxID=246787 RepID=A0A412RVW1_9BACE) HSP 1 Score: 67.8 bits (164), Expect = 3.530e-11 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 2
Query: 116 YMKVVEMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVS 256
Y+ E D E+DALVALY+AT GD W + WC+D P+SEW GVT++
Sbjct: 286 YLNETEADIEKDALVALYKATNGDYWKNRTNWCSDKPVSEWYGVTIN 332
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: UPI00189A6E14 (M64 family metallo-endopeptidase n=1 Tax=Odoribacter splanchnicus TaxID=28118 RepID=UPI00189A6E14) HSP 1 Score: 67.4 bits (163), Expect = 4.780e-11 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 2
Query: 131 EMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGRVTQLYL 283
E+ ER+AL+A Y AT GD W WC+D P+SEW G+T+ G VTQL L
Sbjct: 35 EIAKEREALIAFYHATNGDQWKNNTNWCSDKPVSEWYGLTIENGYVTQLIL 85
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: UPI001899E24F (M64 family metallo-endopeptidase n=4 Tax=Odoribacter splanchnicus TaxID=28118 RepID=UPI001899E24F) HSP 1 Score: 67.4 bits (163), Expect = 4.870e-11 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 2
Query: 110 RGYMKVVEMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGRVTQLYL 283
+G + E+ ER+AL+A Y AT GD W WC+D P+SEW G+T+ G VTQL L
Sbjct: 391 QGNAQEEEIAKEREALIAFYHATNGDQWKNNTNWCSDKPVSEWYGLTIENGYVTQLNL 448
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: UPI0013564D34 (M64 family metallo-endopeptidase n=1 Tax=Millionella massiliensis TaxID=1871023 RepID=UPI0013564D34) HSP 1 Score: 66.6 bits (161), Expect = 8.980e-11 Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 2
Query: 131 EMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSY--GRVTQLYL 283
E+ +R+AL+ALY ATGG++W WC+D P++EW GVT +Y GRV+++ L
Sbjct: 215 EIQQDREALIALYNATGGNNWTHNDNWCSDKPINEWYGVTTNYTTGRVSEISL 267
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: A0A1Y4CTD4_9BACE (Thioredoxin domain-containing protein n=1 Tax=Bacteroides sp. An279 TaxID=1965620 RepID=A0A1Y4CTD4_9BACE) HSP 1 Score: 66.2 bits (160), Expect = 1.230e-10 Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 2
Query: 131 EMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGRVTQLYL 283
E +RD L+ALY AT GD+W WCTDAPLSEW GVT+ Y + Y+
Sbjct: 284 EGPTDRDILIALYDATNGDNWTNNTNWCTDAPLSEWYGVTLDYSQERVQYI 334
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: UPI0020157859 (M64 family metallo-endopeptidase n=1 Tax=Bacteroides uniformis TaxID=820 RepID=UPI0020157859) HSP 1 Score: 65.5 bits (158), Expect = 2.310e-10 Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 2
Query: 134 MDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGRV 268
+D ER+AL+ALY+AT GD+W WC+D P+SEW G+TV G +
Sbjct: 398 IDLEREALIALYKATNGDNWTNNTNWCSDKPISEWYGITVQDGEL 442
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: A0A7X4EYE5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7X4EYE5_9BACT) HSP 1 Score: 65.1 bits (157), Expect = 2.990e-10 Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 2
Query: 128 VEMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGRVTQLYL 283
V + A+R+ALVALY ATGG +W W TD +S W GVTV G+VT LYL
Sbjct: 396 VSIPAQREALVALYNATGGPNWTNNTNWLTDNDISTWYGVTVFNGQVTALYL 447
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: A0A6B1D1G4_9CHLR (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Caldilineaceae bacterium SB0661_bin_32 TaxID=2605255 RepID=A0A6B1D1G4_9CHLR) HSP 1 Score: 65.1 bits (157), Expect = 3.150e-10 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 2
Query: 143 ERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYG-RVTQLYL 283
ERDAL+ALY A GGD+W +K W +D PLS+W GVT G RVT L L
Sbjct: 265 ERDALIALYEAAGGDNWEQKDNWLSDRPLSDWHGVTTDAGGRVTHLKL 312
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: A0A1Y3XDE8_9BACE (Thioredoxin domain-containing protein n=3 Tax=Bacteroides TaxID=816 RepID=A0A1Y3XDE8_9BACE) HSP 1 Score: 64.3 bits (155), Expect = 5.870e-10 Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 2
Query: 131 EMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGRVTQLYL 283
E +RD L+ALY AT GD+W WCT+APLSEW GVT+ Y + Y+
Sbjct: 284 EGPTDRDILIALYDATNGDNWTNNTNWCTNAPLSEWYGVTLDYSQERVQYI 334
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Match: UPI000E4DE867 (M64 family metallo-endopeptidase n=1 Tax=Bacteroides uniformis TaxID=820 RepID=UPI000E4DE867) HSP 1 Score: 64.3 bits (155), Expect = 5.870e-10 Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 2
Query: 134 MDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGR 265
+D ER+AL+ALY+AT GD+W WC+D P+SEW G+T+ G
Sbjct: 398 VDPEREALIALYKATNGDNWTNNTNWCSDKPVSEWYGITIQDGE 441 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig832.19717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig832.19717.1 >prot_F-serratus_M_contig832.19717.1 ID=prot_F-serratus_M_contig832.19717.1|Name=mRNA_F-serratus_M_contig832.19717.1|organism=Fucus serratus male|type=polypeptide|length=55bp MKVVEMDAERDALVALYRATGGDSWNRKQGWCTDAPLSEWSGVTVSYGRVback to top mRNA from alignment at F-serratus_M_contig832:139951..146298- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig832.19717.1 ID=mRNA_F-serratus_M_contig832.19717.1|Name=mRNA_F-serratus_M_contig832.19717.1|organism=Fucus serratus male|type=mRNA|length=6348bp|location=Sequence derived from alignment at F-serratus_M_contig832:139951..146298- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig832:139951..146298- >mRNA_F-serratus_M_contig832.19717.1 ID=mRNA_F-serratus_M_contig832.19717.1|Name=mRNA_F-serratus_M_contig832.19717.1|organism=Fucus serratus male|type=CDS|length=330bp|location=Sequence derived from alignment at F-serratus_M_contig832:139951..146298- (Fucus serratus male)back to top |