mRNA_F-serratus_M_contig830.19706.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig830.19706.1 vs. uniprot
Match: D7G3I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I5_ECTSI) HSP 1 Score: 119 bits (297), Expect = 5.750e-23 Identity = 119/431 (27.61%), Postives = 184/431 (42.69%), Query Frame = 1
Query: 1480 PAPA---PEAIKASVPTPKRNTLES---QRMYPGGVELRSLHNFKVENRPAVTVAHALCGLMNPQTRPEFHFIG-DSEKGSGPFTVHVTVNGVNYSPGTGKTVKAAKFEASVNFIREVVGNRKQLDYGSFQAPPLPAAPAPSDADANL------------------------------------------------EQETVVKKEATTQSASYSPSFLKLLHDLVTALPATDSYTAFEWIDLVEQPTHAQQQPGDSAGDXXXXGATTNLEMEKDVKKECDVDGGSNGSSGPGEPSNETFGNICSENMGPRFRCVAKLKLR--MDEIEGGPKRSREMKAAKRILNMAEMA-LSSSPDDDEALERWKSAQDKMAALKNMPAARVDVLTVTKESSNKRDAKIEAARAMAYKLVPESENDDDLRVRVKAIIDEHR 2598
PAP P+ +K P + L+ RMYPGG L ++ +FK++ + AV+ A +C M P++RP F D+ K PFT++V+VNGV YSP T K K AK AS+NF+RE VG R+QLD S A + A S A A + V K A ++ +LLHDLV A P T +Y ++ + L + +A QQ S+ G FRC A+L LR +D +E ++ E++AAK + +A A L P+++ E + A + +P + VL+ + +NKRDAK +AA+ + Y L+P+ + D+DLR + K +I++++
Sbjct: 818 PAPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVL-NMKSFKLKQKSAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLREAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATGXXXXXXXXXXXKGSRGXGGXXXXXXXXXXXXXXXXXXXDNDDDPVAKHALGDGLQ---NYAQLLHDLVAAHPETPNYASYMFRALKD---NASQQK--------------------------------------------------SKLTGKGFRCFARL-LRHVVDPVETAKRK--EVEAAKSAIEVAAKASLGEDPENEALKEAAREAHKDFLKHRAIPKLSIGVLSAEGDGANKRDAKHKAAQGLMYALMPKCKTDEDLRSQAKVVIEKYQ 1188 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig830.19706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig830.19706.1 >prot_F-serratus_M_contig830.19706.1 ID=prot_F-serratus_M_contig830.19706.1|Name=mRNA_F-serratus_M_contig830.19706.1|organism=Fucus serratus male|type=polypeptide|length=1256bp MEGGNRPSGPWTGKMQPSHEQAQIQPATMQQFSPVPSFQVSTPQQHQRFVback to top mRNA from alignment at F-serratus_M_contig830:283701..326150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig830.19706.1 ID=mRNA_F-serratus_M_contig830.19706.1|Name=mRNA_F-serratus_M_contig830.19706.1|organism=Fucus serratus male|type=mRNA|length=42450bp|location=Sequence derived from alignment at F-serratus_M_contig830:283701..326150- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig830:283701..326150- >mRNA_F-serratus_M_contig830.19706.1 ID=mRNA_F-serratus_M_contig830.19706.1|Name=mRNA_F-serratus_M_contig830.19706.1|organism=Fucus serratus male|type=CDS|length=7536bp|location=Sequence derived from alignment at F-serratus_M_contig830:283701..326150- (Fucus serratus male)back to top |