mRNA_F-serratus_M_contig830.19704.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig830.19704.1
Unique NamemRNA_F-serratus_M_contig830.19704.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 9.800e-120
Identity = 175/343 (51.02%), Postives = 229/343 (66.76%), Query Frame = 1
Query:  253 MWSVWNLGFNYMVMKYLASKKPSKLNPRNFLQRFSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNV-DGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            MW  +N+ F Y +   +     +++  R+    FS  DC+  LRFT+ Q++ +  +L +P  ++T+CGF V G  AL +LLYRLA P  L  +R VFGLS S ISETF +MLH+   KWG LL LD++R+   L EFAEA+Y +  P T  WGF+DGTVR +ARP   QR  YN HKR HA KFQG +TPDGL V + GPV G RHD+++   SGL Q +  H N   G  Y +YGDPAYG+S HL  P+ A+S   LTP+M +FN+RMS CRV+VEW F E++  W F D KPQQK LLSPV  QY V+ LL+N+H+CLN GNQIS +F V+PPT ++YL +
Sbjct:    8 MWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNIHSCLNGGNQISQFFDVQPPTLQEYLKV 350          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 2.370e-115
Identity = 170/309 (55.02%), Postives = 217/309 (70.23%), Query Frame = 1
Query:  352 FSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNVDGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            FS  DC+  LRFT++QV+ +  +L +P  ++T+C FVV G  AL +LLYRLA P  L  +R VFGLS S I E F +MLH+ + +WG+LL LD+ R+   L EFAEA++ SG P T  WGF+DGTVR +ARP + QR+ YN HKR HA KFQG +TPDGL V L GPV G RHD+ +   SGL + +    +  G  Y +YGDPAYG+S HL  P+ A+S   LTPEM +FNKRMS CRV+VEW F E++  WAF   KPQQK LLSPVA QYRV+ LL+N H+C+N GN+IS YFGV PPT E+Y+ +
Sbjct:   22 FSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 330          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 1.110e-113
Identity = 183/359 (50.97%), Postives = 234/359 (65.18%), Query Frame = 1
Query:  223 LLRDRADCD-----HMWSVWNLGFNYMVMKYLASKKPSKLNPRNFLQR--FSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNVDGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            +L  R +CD        +V N    Y+++ Y+   + S   P    +   FS  DC+  LRFT  Q+  +  +L +P  ++T CGFVV G  AL +LLYR+A P  L  +  VFG+S SRI E FK+MLH+ + KWG LL L ++ + L L EFAEAVY +G P  R WGF+DGTVR +ARP   QR+ YNDHK  HAFKFQG VTPDGL   L GPV G RHD ++   SGL Q +    +  GQ Y +YGDPAYG+S HL  P+ A+S   LTPE+ +FNKR+S CRV+VEW F E+   WAF + K QQKSLLSPVA QYRV+ LL+N H+CLN GN+IS YFGV PP+ E+YLG+
Sbjct:  342 VLNGRRECDKPEFTRQRAVCN---EYLILDYILVDRGSTQIPELHGRHGFFSPQDCVNFLRFTILQITVMLELLLIPAFIRTTCGFVVSGREALCVLLYRMAFPCRLKDMPLVFGMSESRICEAFKWMLHFLDFKWGFLLSLSVESVQLRLLEFAEAVYNAGCPLPRCWGFIDGTVRGIARPKRWQRLFYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAMLNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSNWHSCLNGGNEISQYFGVGPPSFEEYLGV 697          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 2.090e-112
Identity = 186/391 (47.57%), Postives = 236/391 (60.36%), Query Frame = 1
Query:  112 LPHKSPRLDNIAVSRQTMTRLPISERNQLKKRILVTKLLRDRADC-DHMWSVWNLGFNYMVMKYLASKKPSKLNPRNFLQRFSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNV-DGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            LP      D    S      L I +R   KKR L+    +        MW   +    Y + +      P+    R+    FS  DC+  +RFTR Q++ +  +L VP +++TECGFVV G  AL +LLYRLA P  L  +R  FGLS S I ETF +MLH+ + KWG LL LD+ R+V  L  FAEAVY  G P T  W F+DGTVR +ARP  ++R  YN +KR HA KFQG VTPDGL V L+    G  HD ++   S L + +Q HMN   G  Y VYGDPAYG + H+  P+ A+    LTP M++FNK MS CRV+VEW F E++  WAF D K QQK LLSPVATQY+V+ LL+N H+CLN GNQIS YFGV+PPT E+YL +
Sbjct:   30 LPASPAPTDFPRASHHVPPSLRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 420          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 8.900e-103
Identity = 163/310 (52.58%), Postives = 205/310 (66.13%), Query Frame = 1
Query:  352 FSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNV-DGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            FS  DC+  +RFTR Q++ +  +L VP +++TECG VV G  AL +LLYRLA P  L  +R VFGLS S I ETF +MLH  + K   LL LD+ R+V  L  FAEAVY  G P T  W F+DGTVR +ARP  +QR  Y+ +KR HA KFQG VTPDGLI  L+    G RHD ++   S L + +Q HMN   G  Y ++GDPAYG + H+  P+ A+    L+  M+ FNK MS  RV+VEW F E++  WAF   K QQK LLSPVATQY V+ LL+N H+CLN GNQIS YFGV+PPT E+YL +
Sbjct:    5 FSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVTPDGLIDDLYAAEVGTRHDGYLLAQSALLEKLQTHMNSPSGHPYCLHGDPAYGQTDHVQCPFSASVNGLLSSAMRNFNKSMSQRRVTVEWGFKEMTSKWAFVGMKCQQKFLLSPVATQYNVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 314          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.490e-100
Identity = 172/387 (44.44%), Postives = 222/387 (57.36%), Query Frame = 1
Query:  250 HMWSVWNLGFNYMVMKYLASKKPSKLNPRNFLQRFSDNDCLRLLRFTRAQVLRLAR------------------------------------------MLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIV-LLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNV-DGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            +MW  +N+ F Y +   +     + L  R+    FS  DC+  LRFT+ Q   L                                            +L +P  ++T+CGF+V G  AL +LLYRLA P  L  +R VFGLS S I ETF  MLH+ + KWG LL +D++R+   LL EFAEA+Y +G P T  WGF+D T+R +AR     R+        HA KFQG VTPDGL V L G V G RHD+++   SGL Q +  H N   G+ Y +YGDPAYG+S HL  P+ A S   LTPEM +FN+RMS CRV+VEW F E++  WAF D K QQK LLSPV  QYRV+ LL+N+H+CLN GNQIS YF ++PPT E+YL +
Sbjct:   26 YMWMAYNMAFIYTMASLITDDVATSLARRDAANFFSPQDCINFLRFTQPQTTLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNRMLHFLDFKWGWLLSVDVERLKPRLLVEFAEAIYNAGCPLTHCWGFIDETIRGIARV----RLADTHQLSIHAIKFQGVVTPDGLFVDLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNMHSCLNGGNQISQYFNLQPPTLEEYLKV 408          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 4.680e-91
Identity = 158/362 (43.65%), Postives = 212/362 (58.56%), Query Frame = 1
Query:  253 MWSVWNLGFNYMVMKYLA-SKKPSKLNPRNFLQRFSDNDCLRLLRFTRAQVL---------------RLARML--GVPKVV--KTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNVDGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            +W V+N+ F Y  M  L     P+ +  R+    FS  DC+  LRF ++QV+                +AR+     P  +  +    F     C   +   +  +P        VFGLS S I E F +MLH+ + +WG+LL LD+ R+ L L EFAEA++ S    T  WGF+DGTVR +ARP + QR+ YN HKR HA KFQG +TPDGL V L GPV G RHD+ +   SGL + +    +  G  Y +YGDPAYG+S +L  P+ A+S    TPEM +FNKRMS CRV+VEW F E++  W   + KPQQK  LSP+A QYRV+ LL+N H+C+N GN+IS YFGV P T E+YL +
Sbjct:   14 IWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFKQSQVIYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFTQSQHPX-------VFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQLHLIEFAEAIFNSCCRLTHCWGFIDGTVRGIARPKYWQRMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVEWGFKEMTGKWVLVNMKPQQKFSLSPIAKQYRVATLLSNWHSCMNGGNEISQYFGVVPLTFEEYLAV 368          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 5.350e-86
Identity = 136/277 (49.10%), Postives = 181/277 (65.34%), Query Frame = 1
Query:  253 MWSVWNLGFNYMVMKYLASKKPSKLNPRNFLQRFSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNVDGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEW 1083
            +W V+ + F Y ++       P+ +  R+    FS  DC+  LRFT++QV+ +  +L +P  ++T+CGFVV G  AL +LLYRLA P  L  +R VFG+S S I E F +MLH+ + +WG+LL LD+ R+   L EFAEA++ SG P T  WGF+DGTVR +ARP H QR++YN HKR HA KFQG +TPDGL V L GPV G RH + +   SGL + M    +     Y + GDPAYG+S HL  P+ A+S   LTPEM +FNKRMS CRV+VEW
Sbjct:   14 IWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSVLNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEW 290          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5KY46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY46_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 1.030e-80
Identity = 121/209 (57.89%), Postives = 149/209 (71.29%), Query Frame = 1
Query:  652 LPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNVDGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYLGI 1278
            L EFAEA++ SG P T  WGF+DGTVR +ARP + QR+ YN HKR HA KFQG +TPDGL V L GPV G RH + +    GL + +    +  G  Y +YGDPAYG+S HL  P+ A+SA  LTPEM +FNKRMS CRV+VEW F E++  WAF   KPQQK LLSPVA QYRV+ LL+N H+C+N GN+IS YFGV PPT E+Y+ +
Sbjct:   22 LIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHHSFILAQFGLMEKLSMQNSPIGHPYYLYGDPAYGLSNHLVCPFSASSAGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 230          
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Match: A0A6H5JM46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM46_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 4.640e-80
Identity = 150/349 (42.98%), Postives = 199/349 (57.02%), Query Frame = 1
Query:  253 MWSVWNLGFNYMVMKYLASKK-PSKLNPRNFLQRFSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFVVDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWGHLLKLDIDRIVLLLPEFAEAVYASG-------APTTRVWGFVDGTVRPVARPTHHQRVMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLMQEHMNV-DGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSVCRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLNAGNQISDYFGVKPPTTEQYL 1272
            MW   ++   Y+ +  LA    P+    R+    FS  DC+  +RFTR Q++ +  +L VP +++TECGFVV G  AL +LLYRLA P  L  +R VF        E   ++  +      H  ++ +  +        +A Y  G       +P T     +    R  ARP  +QR  YN +KR HA KFQG VTPDGL V L+G V G RHD H+   S L + +Q HMN   G  Y +YG+PAYG + H+  P+  +    LTP M+ FNK MS CRV+VEW F E++  WAF D K Q K LLSPVATQY+V+ LL+N H+CLN GNQIS YFGV+PPT E+YL
Sbjct:    1 MWFASHVAVIYITLGLLAIDDIPTGAARRDVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPYRLKDMRLVFR------PERILYLRDFQLDATLHGFQVGVPPLAGRSTAGTKASYFCGGSLQQRLSPDT----LLGLHRRNCARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVELYGAVVGTRHDGHLLAQSALLEKLQTHMNSPSGHRYCLYGNPAYGQTDHIQCPFSVSVNGPLTPAMRNFNKSMSRCRVTVEWGFKEMTSKWAFIDMKCQHKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYL 339          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig830.19704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL85_ECTSI9.800e-12051.02DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KB08_9PHAE2.370e-11555.02DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KLS3_9PHAE1.110e-11350.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS57_9PHAE2.090e-11247.57DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5L370_9PHAE8.900e-10352.58DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KH29_9PHAE1.490e-10044.44DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJ08_9PHAE4.680e-9143.65DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KRJ1_9PHAE5.350e-8649.10DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY46_9PHAE1.030e-8057.89DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JM46_9PHAE4.640e-8042.98DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig830contigF-serratus_M_contig830:235784..249098 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.0
Seed ortholog evalue2.6e-99
Seed eggNOG ortholog2880.D8LL85
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DDE superfamily endonuclease
EggNOG OGs2AWDH@1,2RZYI@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1498
Cds size1119
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig830.19704.1prot_F-serratus_M_contig830.19704.1Fucus serratus malepolypeptideF-serratus_M_contig830 236060..248936 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932465.4307039-UTR-F-serratus_M_contig830:235783..2359991622932465.4307039-UTR-F-serratus_M_contig830:235783..235999Fucus serratus maleUTRF-serratus_M_contig830 235784..235999 -
1690964321.9594474-UTR-F-serratus_M_contig830:235783..2359991690964321.9594474-UTR-F-serratus_M_contig830:235783..235999Fucus serratus maleUTRF-serratus_M_contig830 235784..235999 -
1622932465.5076666-UTR-F-serratus_M_contig830:236058..2360591622932465.5076666-UTR-F-serratus_M_contig830:236058..236059Fucus serratus maleUTRF-serratus_M_contig830 236059..236059 -
1690964321.9742649-UTR-F-serratus_M_contig830:236058..2360591690964321.9742649-UTR-F-serratus_M_contig830:236058..236059Fucus serratus maleUTRF-serratus_M_contig830 236059..236059 -
1622932465.5875247-UTR-F-serratus_M_contig830:248936..2490981622932465.5875247-UTR-F-serratus_M_contig830:248936..249098Fucus serratus maleUTRF-serratus_M_contig830 248937..249098 -
1690964322.0357563-UTR-F-serratus_M_contig830:248936..2490981690964322.0357563-UTR-F-serratus_M_contig830:248936..249098Fucus serratus maleUTRF-serratus_M_contig830 248937..249098 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932465.5260265-CDS-F-serratus_M_contig830:236059..2365971622932465.5260265-CDS-F-serratus_M_contig830:236059..236597Fucus serratus maleCDSF-serratus_M_contig830 236060..236597 -
1690964321.9923415-CDS-F-serratus_M_contig830:236059..2365971690964321.9923415-CDS-F-serratus_M_contig830:236059..236597Fucus serratus maleCDSF-serratus_M_contig830 236060..236597 -
1622932465.547812-CDS-F-serratus_M_contig830:237440..2377841622932465.547812-CDS-F-serratus_M_contig830:237440..237784Fucus serratus maleCDSF-serratus_M_contig830 237441..237784 -
1690964322.0108776-CDS-F-serratus_M_contig830:237440..2377841690964322.0108776-CDS-F-serratus_M_contig830:237440..237784Fucus serratus maleCDSF-serratus_M_contig830 237441..237784 -
1622932465.5679722-CDS-F-serratus_M_contig830:248699..2489361622932465.5679722-CDS-F-serratus_M_contig830:248699..248936Fucus serratus maleCDSF-serratus_M_contig830 248700..248936 -
1690964322.0245833-CDS-F-serratus_M_contig830:248699..2489361690964322.0245833-CDS-F-serratus_M_contig830:248699..248936Fucus serratus maleCDSF-serratus_M_contig830 248700..248936 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig830.19704.1

>prot_F-serratus_M_contig830.19704.1 ID=prot_F-serratus_M_contig830.19704.1|Name=mRNA_F-serratus_M_contig830.19704.1|organism=Fucus serratus male|type=polypeptide|length=373bp
MTRLPISERNQLKKRILVTKLLRDRADCDHMWSVWNLGFNYMVMKYLASK
KPSKLNPRNFLQRFSDNDCLRLLRFTRAQVLRLARMLGVPKVVKTECGFV
VDGVCALTILLYRLANPGTLDHLRHVFGLSTSRISETFKFMLHWANSKWG
HLLKLDIDRIVLLLPEFAEAVYASGAPTTRVWGFVDGTVRPVARPTHHQR
VMYNDHKRCHAFKFQGTVTPDGLIVGLHGPVEGARHDAHMYRLSGLGQLM
QEHMNVDGQTYQVYGDPAYGVSQHLCTPYEATSAAALTPEMKEFNKRMSV
CRVSVEWAFGEVSRLWAFCDYKPQQKSLLSPVATQYRVSVLLTNLHTCLN
AGNQISDYFGVKPPTTEQYLGI*
back to top

mRNA from alignment at F-serratus_M_contig830:235784..249098-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig830.19704.1 ID=mRNA_F-serratus_M_contig830.19704.1|Name=mRNA_F-serratus_M_contig830.19704.1|organism=Fucus serratus male|type=mRNA|length=13315bp|location=Sequence derived from alignment at F-serratus_M_contig830:235784..249098- (Fucus serratus male)
GTTCGTCTCGTAAAGAGGAGGGGCAGCATTGCTTGAAGTCAGTCGTGGTT TATTACGCCGCCTGCGGGACAGAGCGCATGACGGAGTGGCTGAGGGTTAG GTAGGTGAGAGTTACCACACAAATCACCAAGGCTCGACAACATTGCAGTT TCCCGTCAAACGATGACCAGGCTACCGATAAGCGAAAGAAATCAGCTCAA GAAGCGAATCCTGGTCACCAAATTGTTGCGAGACCGGGCGGACTGCGACC ACATGTGGTCCGTCTGGAACTTGGGCTTCAACTATATGGTAATGAAGTAC CTGGCCAGCAAGAAACCAAGCAAACTAAATCCGAGGAACTTCCTCCAGCG GTTCAGCGACAACGACTGCCTCCGGTTGCTTCGCTTCACTCGGGCACAGG TTTGTTAAACGTTGCACTGCAAGTATACTACAGCTAGCTAGTATAGCTTT AAATACCAAATTAGTTTTTCTAGTCTGAACGCATTTATTTAGACTTTCTG AGCTCAGACACTAAAATACAAGACAAAGAAACGAAAAAAATGTTCATTTC CGCGGCAATTCTTTCTGTAATATTATTTTCTTTCTGGCACCTGCCCCGTA TGGGCTGGGCAAGTGAACGAAAAAAAAAGCAAAATGAGACGGAGGTCTCT AGCCTCCTAGTTTGAAATTTGAAAATGGGGCCAACCTTGGGCACGTCATT TTGAAAATGAGGCCCACCGTGGGCACATCTCGTCCTCAGAGTTGCATGTG ATATTTGGCCCACGGGGTACATCTCGTCCTAACGAGGCTCAGAGGCAGGT TTTGTACGGTGCTTCGGAAGGCGTGAACAGTTCAGTAGGTCTCTCTTCTC TCTCTGTCTGTCTTTTTCTTGTGCCCACTGTGGCCACCTACGGAAACGAG GCACTAATCCCATACGCAGGGATAGTTTCACAGACCTCCCTGCCGGGCAG GGAAGTGCTGTCAGATTCGTCCAATGAAATACGATTTTTGGAAGGATTTT GGAAGAAGGACGGGACGAGGTGATTGGCGGATGCGATACATTTCACACAG TACCGTGAGATCATCGTCTCAGCAGCACCCAGGTTCTGTAGATTGCTCTG TTACAGGTCTACCTTCGGTGGAGCCCTTTTACTTGAAAATATATAGGCAG CTCACACACACGAACGCGCCGGCGGCAGCATCGCTGCACCATGCTGGTGT GGCGGTACATCCCCACTATAGTGTGAGAGGGGGCAACGCCCCCCGTGCAA TGTACCTGTTGAAGAGTACCGGCATGACGCCTGTGATTGTGAAAAGTGCG CTGCACCATGACCCCTGTGATCGTCTGATGTCCCGGGCAGCTGTCAAGCC GTAGGGTTGTGGTAACTCAGGCCTGTTTTTTCCAGCAAGTGCTTGTAGCT GCTGCAAGTTGGACGAGTAGAGATCTTGGCGTATAAAACATCTGTTTTCC AACGTCATACAAAGTTCGTTCGGCTGCTGCTGCCGAAATACTATGCGTCC CTCGTTTTTTTGGGTACCAGCAGAAAACGTCCTTTGGAAGTGAAATCTAA GGGGAAGCTTACGACGTCACTCGATATATTCAAAGGACTTCAATTCAAAA AATCGAGATGTAATCGAGCATTATCATCTCGCAAGAGCAAGGCTAGTTTG TAACACCCAAAAATATGAGCAAGACGCAATATGTACCTCTCTCCCTTTTT CACAAAAAAATGCATCTTCAAATTTTGTTTGCGCTTCGCGCGAATAATTT AACTATCTTTAAACAAGGATTGATTCAGAAGGTCTAGGCGCGTTCGCATT TTTCTTTAAAAAAACCTTATGTATGGGATCTGAGCCGGAAATGGCTCATC TCCGTAGGTGGCCACAAGAAAACACAGACTTAGAATTTTTTTGGAACATT TCCGTTTTTTTTGCTCCCATAGCGTGCTTGCCACAAAAATGCCCTACGGA AATTTGTTCAATTTTGTATTTTTGGAGTCCCCTATAGCGGTTGGCCTTAT TAGAGCCTATCTATACCCGTGGAAGTTTTGAAAGAAAAATCTGAACGCAT GTAGACTTTCTGAGCATCCCCTATCCCCCACACGGGGAAAAATGTCAGAA CGCTTAGGTGGGGTCATGGGGGTCAGAGACAAAACATCTTTATGGCATTT AAACGGGTTCCCCGACGGCAGTAATATTGGGTCAACAGCATTATGTCGAG GAGAAGCCCACCGTTAAACTGTACCAGGTAGATACACTTACATTAATCGC CATGCAGAGACGCCAAAAAAATTCAACAAACAAAAACATTGTAGTACATA CCTCAACCAAAACCAACCAAAACCAATGTACCGTAGTACATAATTAGATA GGATACTGTTGTTGTTGTTGTTGTTTATCTCACATTAACTGATCCGCTAC GAATCCAGCCGTGGTCACAAGACAGACGGAACCAAACCAGATCAAAAACC TGTAATACCTTCCGAGATAAGCAGGGAAAAAAGTATATAGAAGACAACGG ACAAGAAAGTAGCCAGCAAGGACATTGTCGCTATAAATAAGAAAATAGGA GACACAAACAAAATCACAGACAGTAGGAACAACCTAGGGGCAACAAATAA AGGCTCCTCAAAAGGCTACGTTGTTGTTTACCAGTATCTCACATTTTTAA CTGGTCTGCTATGAGTCCAGCTGTGGTCACAAGATAGAGGAAGTCACACC AAAGCATATCGTGAGCGAAAACAAGATAAACAAACAAGGAAGAAAGCAGG CAGAAGGAAACGGGCGTAAAAGTAGCCTGCTAAGGACATCATCGCCAGGT AGGGATTCAGGAGGGAAGCCAAGAAGCAAAAGCGAAATAAACCAGTCACA AGTAAGGGCAAGAAAGGCAACCATATGAGCCGTGCAAGACAACCTAGACA TGAAGGCAAGGGCAGGGAGAACGAGTGCGTATACAGCGAAATGGAAAGGG GGGGGAAAGAAGGAGGGGGGGGCAGCAACCAAATCAAATAAGGAGTAGGC TCCATATATCGCTGGAAGAGACGCATAGAAACAACAGCAACAAGGCAAAA AACAAAACAAAATCGCACACGTAATTACTGAGCAAATTCACTAACCTAGC GCTGGCGCTGCATGCTGAATAATATACGATAATTGTGCCATCGCACCATA CAGCAGTAGGGGCTTTTATTATAGGGCCTGTCCACATTATGCTAGCATAA CTTGTAGCATGATCGGCGAAAAGAGTACTGTAATGTGAAGACAACAACAA CAACATAAAGGGAATCATAATTGGAAAGGAGCAATGCTCGAGCATATTTG CGCATATTTGCGCATAAATCAAGCAGAAGCAAGCATATATGCCCATGCCA GTAGAGCATATGCTGCTCCATTTAGGGCAGGAGGTTACCAAAAAGGGGCC GCAATAGGACAAAAAGGCTCTGAGGCACTTATGGAGCACGGACTTTGCTT ATATGTGCCGCTTCGATCTACATACATAAGTACATGAGTTCCTATTTACT CGAACATAAGTATACATACAACAATATAAGAGCGATAATACGCCACGAGC CACGAGCTACGAAATATAAACACGAAAGCAAAAAAAAGTCTGAAAACGCG CGCGCTGCGCTGACACGCGACACACAACACGCGACACACAACACACACTC GCATTGGATACTTTTCGGGCGAGGGGGGCACGTTCGTCATGTGACGATCG TTGTTAGAGTGCAGCATAGCAGTATGCGTGTGTGTGTGTGTGTTTTCTTC CCGTCCATTCTGGACATCAATGGACGTGCCAGCCGGGGTCACACAGGAGG AAGATCACACAGGATTTCTCATCCACCTTCCTTCTGCGGTGCGTGCCTTA ATTTTTATCGTGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGA AGTCGAATTTTGTGTACTAACGATTTAATCGTTCTCCACACGTTGGGCAT TTTTTTTTTTTTAGTTTTTATAGTTTTTAGTGAGGAAAATCCCGTTTGCC GGGATCGAACTCGCGTCCCAACGTGTCAGAGGGTTACGAGGTACTTCTGA GCTACAGTACCGGGGCGACCGGTGTGCGATTCATGATTCTAGCATGCAAG GGTTGCTGTTTGCCAGTGAAAGTATTTTATCAGGGTGCGTTTTTCGAGAG ATATGCAGTTTGAGACCAAAATAGCCACTAACCTAGAAATGTATACTTAC AGTAATCCAGATATCTCGAGACTATCGCGAGAAAATTGAAACCAATAATG ACTGGCACAGATAAAAAGCCAACGACCATAACGTGACGTTTCAAGCAAAC GTCCCCCCGAAAAAGGAGCATAAGCAGTGCAAGTGGAGGCACAACCCCCC AAAAGAGCATACTCAACAAGCATAACAATATAAACAAGCATAAATAAGTG GCATTTGAAGATAAAGCCCCCCCCCCAAGGAGCATAAAATGGAGGCTCAA ACACCAAAAAAGAGCATAATCCACAAGCATATTTATTTGCCTTCGGAAGC GTAAGTTTGCCCCAAAAAAAGAGCATAAAAAAAAAAAAAACAGAAAGGGG ACAGGCCTAGCTTTTGGTCTAAGAGTGGTACATACATAGGGTTTGGGTAA AGGATTGTATGTATGTATGTGTGTATGTATGGTGATCACATATAGCAGAG TATGGATCAACCGTGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACA GGGGAAATGAATGTTCCCCTGTCCCCGTGCGTGCCTGAGAATTTGGTCTC GCGAGATGGGTTCAGCCGTCCCGTCCCGCCTCAACGTGCCCATCTCCATA ATACTCAGGCTGAATGAAACAGGGTCAGAGAGGACCACCATCGTAGATAT CTTGGACATAATCCAGCAAGTACGAGACACGCCGATATTCACTTGAAAGT AAACCGAAGAACCAAAGAACAGCAATGGAGGGCCACAAAAGAAAAGCGAG AGGCAGGTGGGCAGAGGACGCACGTATACCGGTCATAATGCTACCACTCG CCTGCTCGCATAAAGTACCAACTCTAAGTCAGCTAACGAAAGCCTCGCGA AGGCTTGATGACATGATAACGCCATGCATGCCATGAAGAGGTTTTGTATT TGCAGCCTTCTTTGGTCCCACCTAAACGTTTTGACATTTTTTCTCTTCTG ACTGGAGGATGATGACGGTCAAAAGGTGTAGGCGCCTTCTGGTTTTTCTT TAATAAACAGAGTGCCTTAGTACGTTCTGCAGACAGTTGAAATACCTTCA GTTTTGAAACCCTGCATAGTCTAGTCTATTTATGAGATATCATGTGTGTT AGATGTGAACAGACTCATCACAAACGAACAGCCCAAAAATGTTCCCGTGC GAAAGTCAAACATGTGAGTTTATGTGACCGCCTTCGATGTTAGGCCGTCT CTTATGGGATCAGAATTGGAACTTCGACTTGTCAGAATTTAATAAATTTA GCCAAGTCCCAATAACGGGGGAAAAAATCTGACTTGCCCTTGTAGTGGGG ATCATTGTTTTGGAACTTTGGGTTTTTGGAGATGCGGATCGCGCATGAGT TTGGGAGCGTTAAACTAAAGCCGGTGCCCACCGTTTGTCCACCACAGTAG TTGGTACGTAGGGTTCCCGCCTAATCTTGAATTCGAATGATGTCAAAAAT AGACTGCTGTACTACACAGTCTATTCATTGTGTATATATATATATGTATA GCATGTAAAGCTATGTATTTACTACGTGTATGTGTAGCCATCCCATACTT TGTACAGCAGTGTATAGATCAACCGGTTGCCAACCTGCTCGCGGTCAACT GAACAGGGAAAAATAATATTCCCCTGTCCCCGCACGCGAGCGAGAGTTTG GTCTCGCAAGACGGCTTCGGTCGTCCTGTCCCGCGTCAGCCTGATTGTTC TCCATACGCAAGCTGAATATCATGCTTGCTATACACACACGCATCACGCC CTCTCCCTCCGAAACCTGGTTTTGGGGTATGAGTGTGGGAGGGTCTTTCC GGCGGGTGTAGGGCCGGACTCACCCTCAAGAGATGCAGCCAACTGGCTGC CTTCGCGATTCAGCCTGTAGGTTGAGACGCGGCGGCGGTATGGTTGGCTG AGGATAGTGTTCCCAGGTGCGCACCTCTTCCGAGCCCCAATTTGGTGCCC TTCGGAAGGGTGGCGGCACGCGAGAGGCAGGGAGCACTGTCGCGGAGAGC CTGGTAGTGCTCTATCGGGTGGGTACGCACCAGATTCGGTGAAGGCGGAG GGCAGCTCGATCGTCGACGAGCAAAGGGAGGGCTGAACCCCTGTGCGCGA GAATCACAGGCTTGAACCGGGAGGTTTCTGAGAGAAAAGCTGACATCTGA CCACGGTCATTTTTCTTCCTACGAGGGCCACTAGGAGCGGCGAACGGCCA AGATTTGTGGGGCTTTTTCAGGGATGCACAGGGCTTTGGACGGCTGGATG CTGGCTCGCGCGCCGGCTTCACCAGCTCAAGGCCTCCACCACCATGGGCC TCGGTATTTCAAATTTCCTTATTTCTGTACAATGTGTGGCCTTGAGAAAC TTGGACTTGTCGATCAAAACTGGTTGGAGCGTAATTTGTCCGTTTTTTTG CTGAGAACGCTGGTCGTGGGTAGGCGACAACAATCCGGGTCGATCGATGT TGCTCTCGATATGGAGTAAGGATGTTTGATGAACCGTTTTGATAGTGGTC GGTGCCATTGTAGAGTCTCATAATGTTTTGTCGCGATTTGGATCATCCCT GTTGGTCTGAGTAGCGGGTTGTCACCATGATGTGACCCGTTGACCTTTAT ACCTCTTTGTGACCACAAGCGGGACTGATAATTGATAGGTCTATGGCTGA CTTGTTGTGTCACCGTAGTTTCTTCAGTTGCAAAGACAATACGCTGAATG TGTGAATCAACAACAACAACAACAACACGCAATCGGGTCAGTCTCGAGTT TATCGGGTCACGTAATTGCGAGTCCGCCGGCACAGAGTCAGTACAGGTCT CAAGTAACGGGTGCTACCTTTGATGGTTACCATGGACTATGACCGATTAA TGTCCAACTCTCTTTTTCCATATGCCCGATGTGAATGAACATTCGTCATA GCCCTCCTTTACCAGCTCACGGTCGTTGAGATTTCAAAAATAGACTGACT GCTGTAGGGTACATTTTTATAGCATTTTTTTATTGTATGGTATGTAGGAG ACACATCGGCAGGCGGTCTTAGTAGATGTAGCAACGTCACACGGAAGGCG CTGCCGCTCCAAATGCTCAAGCTCAACGATAACACTGGTAGACTCCGATA TTATGTCGGGCACTCTCCTCGGTAACCAAGCTCGGTCGGGCTACGGCTGC GATAATGAAAGTCTAAGGTTTGCTGTCGTCTCCCTCTCTGCCTCCCTTTT ATCTCTTCAAAATGCGGCGCAACTACCTCGAGGTGAAGGTCTGACCAAGT TGTCAAGCCCAGAGCTCGGGTCAGAATTTGGCCAAAATTCTGACTCAAGT TTGGGCTCGACCGGCGAGTCGGAACTTTTTGTGACTTCTGACTCAAAGTT CCGAGCAAAAAATATTCCATAACAATTTTTTCTTCTGAGGCCGTTTCTTA CAAGGAAAATTTTTGAAGAAATTCTGGCGTCGGAGAGGTCAAAAATTTTC CTTGGAAAATTTCGTCAGGTGCACAATCTGACGATCTCGGACCGTCTCTT ACGACCCAAGAGTTTTTTTTCAAGAAAATATTCGTGTACAGTATTCAAAT GCAGCGTATTTCGTAGTCCATGATGAGTGGATGCTGGGGTGGGGTGGGAA GACGCTGATGGAAGAGTAAGGGACGGATGACCGACGATTCTTGTCGCACG CAGGCTTGGAACCCAAAGTAGAGAGAGACCAAGACGGTCTACACCTCATA ATACCTTACCGAAATAAAACCTCTCTGGGGCTCGTCTTTTCGCCGACCGC TAGGCTGGACTCTCAGTAACCCCTTCAGGTTCGCCAGTTTACTTTTGCTA GAGGTGGGAAAAATAGAGGAGAGAGAGGTGCAGCAAGCATGCTGCTGCTG CGTGTGCGAGAAAATGTACAACAGTAGCAGCAGCGTAGTTTGGGGTCTAC GCTGTGTAGTATGTGTGCGCCACACAGCATTCATTGATGATGCATAGTGG ATAGTGTGTACTGGTAGGAGCGAGCGAGCGACGTGAGCACATCAAGTTTA TGTAGGAACTGAGCAGCACAAATTTGATGAGCTGCTGCTACTCTGCGTTT GAGCTTCAGTACCTACTACTGCTTGGTACGTGGCCATCTGCTTGCTACCA GCGCGTGGACGTTATCTCGCAGCTATTATTACAGACAGTTACTCTGCGTT TGAGCTATACTGCTTGGTACGTGGCCATATGCTTCCTACTACAGCGTGGG GACGTTCTCTCGCAGCTACCAGATCAGCTACTCTGCGTTTGAGCTACTAC TGCTCGGTACGTGGCTATCTGCTTTACCAGCGCATGGACGTCCTCTCGCA GCTATTATTAGATAGCTCCTTGCATGTCGGGTTCCGGAATTATCAATCAT CCCCTACGTGACGAGCCCGGACTGAAAACAAAAAAGTCAATCATCATTCC AGCGAGTACAGCAGTGCTGCCACGCACGTTCGTCAAGGCTCTTGGGGCAA CGTTTGTGTGACTCGATGCATGTTGTATGTGCGAGTACAACAGAGAACAC AGTTGTGTGTACTGATTTCAGTTCTATTATCCACTGTCTATTATCAAGTG ATCCCAAAATTTCCTAGCAAAATTTCCTCGAGATTCCAGGAAATTTTGGG CTTCAAAATTTCCTCGACTAGGAGAATCCGGGCCAAAATTTCCCGAGGAA ATTATGGGCGAGGAAATATTTCGTCAAAATTTCCTCGTAAGAAACTTTTT TTTCCCCCCAAGAAATTTTTGGCCCCTCCGGCGCCGAAATTTCCTCAAAA TAATTCCTCGTAAGAAACGGTCTGACTGGAGGATGCTCAGAAAGTATAGG CGCGTTCTGGTTTTTCTTTAAACAAGGGTTTGTCAGAATTATTTCTCGGA ACTTCACCAAATCAAAGTTTTTGACAACGAAGTTCTGACAACGAAGTTCT GACCCCATAAGAGACGGCCTTATTAGCTCGGGGGCGGGCTTATGTTTCTC GAACTTGCCATATCGCCCCTAAGATACAATTGGTTATTGCGAGAACACTC GTTGCGTTACCAGCCAACGCGTTGGCTAAAAAGAAAGACACCCAACGTCC TAAGCGCTGTACCCGCATGGGCGCGTACGCACGAAGCGAAAGTTTCACCC CGAACCCTCGGCGGTAGAGTAGCCGAGGAGTTTCGCCTCGTGATCGCTGC CCCTTTGCCCACTGCGTTTATTAGTTGTTATAGTAGTAGCCATCCCCCAA CCACGAGTAGTATATTTCGACGTTACCAACAAAAACTAACAACACCATGC ACCTCTGTGGCACCCTCCGAGCTAACGCATCTTCAGGCGCTCTGTGACAC AGAGCGTCGAGCATTTGTACCGCCGATCGACTCGAACCGCACGGATGTTG TGTTTCCCAAGAGGGGACGGCCGATCATACGCCGTGTTGCAAAAAAAAAA ATCGCCCTCGTCTGGCTCCCGCATTGCAACCCCCAGCAAGGCCACTAATT ATTACAGTATGTAATAGGTCAGTTCGGGGACCTTGGCCAATCACATCATC AAAGTACCTTGTACATCTGGTCCGCACACACATTTATGACTTTCTATTTG GAGCCTATGGGTTTGGGGCAAAAGCCCATGTCATACCGATCCTATTTATG ACTTCGGGATGTATATTGGTCGTCGGCACGCCATATATATATATGGGTTT TGCAAACACTTATCTCACTTATCATACGGTCGACGGACCTCACGCAGGTT ATCAATCCCACCTAATGCAACGTTGCCATTCTGCCTGTGGTCACGAAGGA TCTTCCCATCTCTCCCCGGTTCTCCCCTTACGAATTTTTATCGCGATGCA AGTTCAGCACTCTTACAGGATCCCCACCTAAACGTTTAAAACATTTTTCC CCCCTGACTGGGGGATGCTCAGAAACTCACCACTCCTCGTGCCCTCTCCC TCCGAAACCTGTTTTCGGGGTATGAGTGTGGAAGGATCTTTCCGGTGGGT GTAGGGCCGGACTCACCCTCAAGAGGTGCAGCCAACTGGCTGCCTTCGCG ATTCAGCCTGTAGGTTGAGACGCGGCGGCGGTATGGATGGCTGAAGATGA TGGTGCTCCCAGGTGTGCGCCTCTTCCGAGCCCCAATTTGGTGGCCTTCG GGAGAGTGGCGGCACGCGAGAGGCAGGGAGCACTGTCGCGGAGAGCCTGG TAGTGCTCTATCGGGTGGGTACGCACCAGATTCGGCGAAGGCGGAGGGCA GCTCGATCGTCGACGAGCCAGGGGAAGGCTGAACCCCTGTGCGCGAGAAT CACATGTGCAGGCTTGAACCGGGAGGTTTCTGAGGAAAAGCTGACATCTG ACCACGGTCATTTTTCTTCCTACGAGGGCCACGAGGAGCGGCGAACGGCC AAGATTCGTGGGGCTTTTACAGGGATGCGCAGGGCTTCGGACGGCTGGAT ACTGGCTCGCACGCCGGCTTCACCAGCTCAAGGCCTACACCACCATGGAC CTCGGTATTTCAATTTTCCTTATTTCTTTACGATTGTGTGGCCTTGAGAA ATTTGGACTTTTTGTTGATCAAAACTGGTTGGAGCGTAATTCTTCCGTTT TTTTGCTGAGAACGCTGGTCGTGGGTAGGCGATAACAATCCGAGTCGATC GAGGTTGCTCTCGATATGGAGGAAGGATGTTTGATGAACCGTTTTGATAT TGGTCGGTGCCATTGCCTGTAGAGTCGCATAACTTTTTGTCGCGATTTGG ATCCCTGTTGGTCTGAGTAGCGGGTTGTCACCATGATGTGACCCGTTGAC CTTTGTACCTCTTTGTGACCACAAGCGGGATTAGCATTTGACAGGACTAT GGCTGACTTGTTGTGCCACCGTAGTTTCTTCAGTTGCAAGGACAATACGC TGAATGTGTGAATCAACAACAACAACAACAACCATTGGTTGAGTTTTGCT TACTCGTCTTCTCACGTCTTCCGCCACGGAAGCCACAACAACAACAAAAA ATCATGCTTTGACAAGAATCGAACTCACGATTTCCGCACTAGCCTAGTGT ACACCTGCGTTTTTACCACTAGGTCACTCGGGCGACGATCAATCAAATGA TGGGAGTTTTTACCTAAATGGCACCAATGCACGCACTGCTGGCCCGTCCT TTATTTATGTTCAGGTGTTGAGGCTCGCACGCATGCTGGGGGTGCCGAAA GTCGTCAAGACGGAATGCGGATTCGTTGTTGACGGAGTGTGCGCTTTGAC CATTCTTCTCTACAGGCTGGCGAATCCGGGTACCCTGGATCACCTCCGAC ACGTATTTGGCCTGAGCACTTCACGCATAAGCGAGACGTTTAAGTTCATG CTGCACTGGGCCAACTCAAAGTGGGGCCATCTGCTGAAGCTGGACATCGA TCGGATCGTGCTCTTGTTGCCCGAGTTTGCAGAGGCCGTTTACGCTTCAG GCGCTCCGACGACCCGCGTGTGGGGCTTCGTTGATGGCACCGTTAGACCA GTCGCCAGGTGGGCAAGCACATGGGTTCCGAGTGGAGGTCTGGCCCGTCT TACTTCTCAACACGCCTACTTCATACCGATAGTGGGGTGTGGGAAAGAGA GGCGCGCATTGGTTGGTCCATGGTGACCTGTCAAGGCAGCAGCCGTTACT GGAATAGCCTTGAGGAACTACTGGCCCTGTGCCGGCGGACTCTCGGCAGT GAACGCCATCGGTACGCAATTGCCGTGACCCGATAGAACTCTTGTCCCTA CAGCCAATGTTCTCTCCTAGATCTTTTGATATTACCTCCGAGATTAAACG CTCAGACTTTTCTTTAAACTCGAGACTGACCCGATGGCCTATGATGGTAT ATAAATAATGGACGCCGCCACCGCGGAAGTTGGGAGGAATCTCGCCAGTA AGCACCAGATTCAGCCCGAGTGTGGAGAATGAACAGGCTGACGCGGGACG AGACGGCCGAGCCCGTCTCGCGAGACCAAATTCTCAGGCGCGAGCGGGGA CATGGAAATATTTATTTTCCTTATTCAGCTGAATGCGAGCAGGGTTGGCA ATCTTACACGGTTGATCCATACTCTGCTATATGTGATGGCCATACATACA TACTTAAATGCATACATACATACTTGAATGCATACATACATAAACTGCAC GATAAAAGAAATACAAACCTAACGAGGCGTGCGACGAATTTGGGGTTACC AAGCGTCGCGCTACTATGACCCTCCCTCCCTCCCTCCCTCCCTCTCTGGT GGCATTTCAATCTCAGATGCGACTAATTTCATCCTACTTCCGCACCCCCG ACTTTGTTGCGCTTTTCCTCTTCTTCTCTACCGAATGATACCATACCATA GGCCAACGCATCACCAGAGAGTGATGTACAACGATCACAAGAGATGCCAT GCCTTCAAGTTCCAAGGAACCGTGACGCCGGATGGTTTGATTGTTGGCCT TCATGGGCCCGTCGAAGGCGCTCGACACGACGCGCACATGTACCGGCTTT CGGGACTAGGGCAGCTCATGCAGGAGCACATGAACGTTGATGGCCAGACA TACCAAGTGTACGGCGATCCAGCGTACGGTGTGAGCCAACATCTGTGCAC GCCGTACGAAGCGACTAGTGCTGCCGCTCTTACTCCTGAAATGAAGGAGT TCAACAAGAGGATGAGTGTCTGTCGAGTGTCCGTCGAGTGGGCCTTCGGA GAGGTATCACGCTTGTGGGCCTTCTGCGACTATAAGCCCCAGCAAAAGAG CCTTCTCAGCCCTGTAGCGACGCAGTACCGTGTCTCCGTACTCCTCACTA ATCTCCACACATGCCTGAACGCGGGTAATCAGATTTCCGATTACTTTGGC GTGAAACCGCCGACGACCGAGCAGTACCTAGGAATTTAGACTCAGGCGTC GGGGGTTTTGGACGAGTTACTTGGAGCTCGAGGGGACATAAGTTCGGGCG ACGTGGGGGTAAGATATCAACAGCGTAAAAACATATCAGTAGTATATTGT TTTTTTGAAGGGGAACACGAATGGACTCGTCGCGTGTAACAAACATTTAT GGCCGATCCGTCGCCGCGTACAGTATACATCGAATCATGGGCATGGGGAT CATACTGCCAAGTCTATTTGCACGTACTCATACAAAGGCTTTTTAAGTCT TCCGACCAAATATCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig830:235784..249098-

>mRNA_F-serratus_M_contig830.19704.1 ID=mRNA_F-serratus_M_contig830.19704.1|Name=mRNA_F-serratus_M_contig830.19704.1|organism=Fucus serratus male|type=CDS|length=2238bp|location=Sequence derived from alignment at F-serratus_M_contig830:235784..249098- (Fucus serratus male)
ATGACCAGGCTACCGATAAGCGAAAGAAATCAGCTCAAGAAGCGAATCCT
GGTCACCAAATTGTTGCGAGACCGGGCGGACTGCGACCACATGTGGTCCG
TCTGGAACTTGGGCTTCAACTATATGGTAATGAAGTACCTGGCCAGCAAG
AAACCAAGCAAACTAAATCCGAGGAACTTCCTCCAGCGGTTCAGCGACAA
CGACTGCCTCCGGTTGCTTCGCTTCACTCGGGCACAGATGACCAGGCTAC
CGATAAGCGAAAGAAATCAGCTCAAGAAGCGAATCCTGGTCACCAAATTG
TTGCGAGACCGGGCGGACTGCGACCACATGTGGTCCGTCTGGAACTTGGG
CTTCAACTATATGGTAATGAAGTACCTGGCCAGCAAGAAACCAAGCAAAC
TAAATCCGAGGAACTTCCTCCAGCGGTTCAGCGACAACGACTGCCTCCGG
TTGCTTCGCTTCACTCGGGCACAGGTGTTGAGGCTCGCACGCATGCTGGG
GGTGCCGAAAGTCGTCAAGACGGAATGCGGATTCGTTGTTGACGGAGTGT
GCGCTTTGACCATTCTTCTCTACAGGCTGGCGAATCCGGGTACCCTGGAT
CACCTCCGACACGTATTTGGCCTGAGCACTTCACGCATAAGCGAGACGTT
TAAGTTCATGCTGCACTGGGCCAACTCAAAGTGGGGCCATCTGCTGAAGC
TGGACATCGATCGGATCGTGCTCTTGTTGCCCGAGTTTGCAGAGGCCGTT
TACGCTTCAGGCGCTCCGACGACCCGCGTGTGGGGCTTCGTTGATGGCAC
CGTTAGACCAGTCGCCAGGTGTTGAGGCTCGCACGCATGCTGGGGGTGCC
GAAAGTCGTCAAGACGGAATGCGGATTCGTTGTTGACGGAGTGTGCGCTT
TGACCATTCTTCTCTACAGGCTGGCGAATCCGGGTACCCTGGATCACCTC
CGACACGTATTTGGCCTGAGCACTTCACGCATAAGCGAGACGTTTAAGTT
CATGCTGCACTGGGCCAACTCAAAGTGGGGCCATCTGCTGAAGCTGGACA
TCGATCGGATCGTGCTCTTGTTGCCCGAGTTTGCAGAGGCCGTTTACGCT
TCAGGCGCTCCGACGACCCGCGTGTGGGGCTTCGTTGATGGCACCGTTAG
ACCAGTCGCCAGGCCAACGCATCACCAGAGAGTGATGTACAACGATCACA
AGAGATGCCATGCCTTCAAGTTCCAAGGAACCGTGACGCCGGATGGTTTG
ATTGTTGGCCTTCATGGGCCCGTCGAAGGCGCTCGACACGACGCGCACAT
GTACCGGCTTTCGGGACTAGGGCAGCTCATGCAGGAGCACATGAACGTTG
ATGGCCAGACATACCAAGTGTACGGCGATCCAGCGTACGGTGTGAGCCAA
CATCTGTGCACGCCGTACGAAGCGACTAGTGCTGCCGCTCTTACTCCTGA
AATGAAGGAGTTCAACAAGAGGATGAGTGTCTGTCGAGTGTCCGTCGAGT
GGGCCTTCGGAGAGGTATCACGCTTGTGGGCCTTCTGCGACTATAAGCCC
CAGCAAAAGAGCCTTCTCAGCCCTGTAGCGACGCAGTACCGTGTCTCCGT
ACTCCTCACTAATCTCCACACATGCCTGAACGCGGGTAATCAGATTTCCG
ATTACTTTGGCGTGAAACCGCCGACGACCGAGCAGTACCTAGGAATTTAG
GCCAACGCATCACCAGAGAGTGATGTACAACGATCACAAGAGATGCCATG
CCTTCAAGTTCCAAGGAACCGTGACGCCGGATGGTTTGATTGTTGGCCTT
CATGGGCCCGTCGAAGGCGCTCGACACGACGCGCACATGTACCGGCTTTC
GGGACTAGGGCAGCTCATGCAGGAGCACATGAACGTTGATGGCCAGACAT
ACCAAGTGTACGGCGATCCAGCGTACGGTGTGAGCCAACATCTGTGCACG
CCGTACGAAGCGACTAGTGCTGCCGCTCTTACTCCTGAAATGAAGGAGTT
CAACAAGAGGATGAGTGTCTGTCGAGTGTCCGTCGAGTGGGCCTTCGGAG
AGGTATCACGCTTGTGGGCCTTCTGCGACTATAAGCCCCAGCAAAAGAGC
CTTCTCAGCCCTGTAGCGACGCAGTACCGTGTCTCCGTACTCCTCACTAA
TCTCCACACATGCCTGAACGCGGGTAATCAGATTTCCGATTACTTTGGCG
TGAAACCGCCGACGACCGAGCAGTACCTAGGAATTTAG
back to top