mRNA_F-serratus_M_contig83.19697.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig83.19697.1 vs. uniprot
Match: D7FK09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK09_ECTSI) HSP 1 Score: 355 bits (912), Expect = 2.780e-104 Identity = 312/777 (40.15%), Postives = 386/777 (49.68%), Query Frame = 1
Query: 193 STSGVVDAEVDRNVLDHVDEKGLTALHYAVRKSSLDAIRVLLRLGVDVTVRGGPDSAFPNLTACEVALSGGCKGNPEEVKQVFLTEAVQAIAQGNEERLSAFFEAGLEASSEYGGAGTDGESEGQKMSLAKWAEQFGRAEMFSALSKRAQGRNNEAFPSEGNGDGDGGNQGMEALVEREDGERQGLDEGGRPSDARNKGTAATDHAGMFVEELREVIVGLTAECEQLEAVLSPRGMLGIVRRARSALEELMSAEREVETAKALCKRWRMEEHVAVAENARLQAAVVEAQAAVHRQRTGAAENAQPLGAPNAGSSRDDP--EGDVKQPLNAS-----------------------------TCNDHEGRKVEGGV--AGGEDGNGASRREGD----GETLLESRKREEAEALSSQLQLIAAYMEDEIQIMRALESGSGVGGVLLRIRGLRERVEAAHEEARQAFSVSRYLEARVVILTDNGNELRSQLERLEGYLRQPEGALNESAASARKGATPPGKEDVDASPAPVE--HSYRGPKLDACLDSDGEGDPPVVAAGVKCRGDDAKGQCIPAAAAAP-----APAAPVAAA-------TPFGIPLTERGEADGGAGENDDAVSSGRVGSANDPLPSVNETETVRRSAAVEATVAEKSGETSEKDKTPSASASETKGGVTREGRARALLLAPGVDAEDGVRGWRRPRRGVAVDGSGGRSGEDEHEQPPKVTVMQDVMSALFGWRVSAGARRGG--GEIS------GIGGDSNAARIMFA 2346
STSG D +V+R VL HVDE GLTALH+AV+KSSLDAIRVLLRLGVDVT RGG FPNLTA +VALSGGCKGNPEE+KQ+FLTEAVQAIA+G+ ERL F +AG+EASSEYG A G N A S G G+ G G E EG R D +G AA D G+FV ELRE IV LTAE E+LE L+ RG GI++RAR ++L+ A EV+TA ALC +WR EE A +NARLQA V+EAQ AV R R G L + +R P G+ P + T E V GG AG E+G+ R+G G T +SR+ EEAEAL SQLQ+IA ++EDE+++MR+L G G GV+ RIR LRE +EAA EEARQ ++VSRYL+ARV++L + GNEL +QL+RL GYLR+P GA + + A KED+D +E H + GP + S E + + D+ + + A P APA VAA +GG GE G V LP + + A GE S + S+T GG REGRARALL A GVD R + KVTV+QDV+S LFGW VS+ A R GE+ GG A +MFA
Sbjct: 61 STSG--DCDVEREVLGHVDENGLTALHHAVKKSSLDAIRVLLRLGVDVTARGGAQGPFPNLTAYQVALSGGCKGNPEEIKQIFLTEAVQAIAEGDAERLGEFLDAGVEASSEYG----------------------------------ADGGNPNAETSARGGMGETGPHGAEEAEA----------EGSRVWDDGGRGAAADD-VGLFVGELREAIVDLTAESEELEEELAHRGTFGIIKRARQTRQDLILASSEVDTANALCDKWRAEEDAASEDNARLQAQVIEAQLAVQRHRAG-------LQGSDGDDNRSSPIARGEKTPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTQPSPENMTVAGGDVRAGEEEGDADLERDGGVGNPGGTE-DSRRTEEAEALGSQLQIIAMHLEDELRMMRSLIDGEGAVGVVRRIRALREEIEAAEEEARQTYAVSRYLQARVIVLHEAGNELFAQLDRLNGYLREPPGAALLANGEPPRAAN---KEDIDDDDITLERGHYHSGP-----VPSGNEEGNTLELRSINGGEDERSEENMTQPHAPPDEDSLAPAEEVAAEGXXXXXXXXXXXXXXXXXXXEGGEGE-------GPVFVRPQELPEAGVFDISDAGEVQPPSPANSVGEGS----AAATEESDTAGGSGREGRARALLNARGVDTRSTARNAK------------------------KVTVVQDVLSVLFGWEVSSDAERKAARGELEEMGSGGNFGGSGGMAGVMFA 739 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig83.19697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig83.19697.1 >prot_F-serratus_M_contig83.19697.1 ID=prot_F-serratus_M_contig83.19697.1|Name=mRNA_F-serratus_M_contig83.19697.1|organism=Fucus serratus male|type=polypeptide|length=771bp MARDESGRDIDEERRVLIHASSLNRADVIKKVLLRDSQGSVPQAGGSGSPback to top mRNA from alignment at F-serratus_M_contig83:727662..744456- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig83.19697.1 ID=mRNA_F-serratus_M_contig83.19697.1|Name=mRNA_F-serratus_M_contig83.19697.1|organism=Fucus serratus male|type=mRNA|length=16795bp|location=Sequence derived from alignment at F-serratus_M_contig83:727662..744456- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig83:727662..744456- >mRNA_F-serratus_M_contig83.19697.1 ID=mRNA_F-serratus_M_contig83.19697.1|Name=mRNA_F-serratus_M_contig83.19697.1|organism=Fucus serratus male|type=CDS|length=4626bp|location=Sequence derived from alignment at F-serratus_M_contig83:727662..744456- (Fucus serratus male)back to top |