mRNA_F-serratus_M_contig826.19671.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.120e-37 Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = 3
Query: 378 PLAKKPRVLSVMEQRRANRLAA--AGSAGAAGDEAESGSGPSITHKVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
P KK +VLS +E+RR RLA A SAG A A S + V +EL Y AE EE FSL FW+RR P+ TGEV E +PHLAL+ARL+HG+E+TSCQAERNFSALA LIG++RS M KVE++MFLRLN+ YIPE+ A + ++ +A +C+E + + EAAGD + + L
Sbjct: 323 PAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVS----TARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAVVLTL 507
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.070e-36 Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = 3
Query: 378 PLAKKPRVLSVMEQRRANRLAA--AGSAGAAGDEAESGSGPSITHKVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
P KK +VLS +E+RR RLA A SAG A A S + V +EL Y AE EE FSL FW+RR P+ TGEV E +PHLAL+ARL+HG+E+TSCQAERNFSALA LIG++RS M KVE++MFLRLN+ YIPE+ A + ++ +A +C+E + + EAAGD + + L
Sbjct: 651 PAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVS----TARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAVVLTL 835
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 140 bits (354), Expect = 7.300e-34 Identity = 82/187 (43.85%), Postives = 119/187 (63.64%), Query Frame = 3
Query: 384 AKKPRVLSVMEQRRANRLAAAGSAGAAGDEAESGSGPSITHKVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
A K + LS +E+RRA R+AAA + G E S PS T +V + +E+ Y AE +L+ DGF++ G+W RRG+ +S TG+V A MP+LA +ARLY G+EATSCQAERNFSALA LIG +R M KVE+MMF+RLN+ + E+ + + + +A + + + + AQ E A +++ L
Sbjct: 466 APKKKKLSRLEERRAARVAAATTGGDETGSLEDQS-PSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDLCL 651
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.270e-33 Identity = 82/187 (43.85%), Postives = 119/187 (63.64%), Query Frame = 3
Query: 384 AKKPRVLSVMEQRRANRLAAAGSAGAAGDEAESGSGPSITHKVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
A K + LS +E+RRA R+AAA + G E S PS T +V + +E+ Y AE +L+ DGF++ G+W RRG+ +S TG+V A MP+LA +ARLY G+EATSCQAERNFSALA LIG +R M KVE+MMF+RLN+ + E+ + + + +A + + + + AQ E A +++ L
Sbjct: 661 APKKKKLSRLEERRAARVAAATTGGDETGSLEDQS-PSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDLCL 846
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.840e-32 Identity = 76/187 (40.64%), Postives = 115/187 (61.50%), Query Frame = 3
Query: 384 AKKPRVLSVMEQRRANRLAAAGSAGAAGDEAESGSGPSITHKVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
A K + LS +E+RRA R+AAA GA+G GS + +V + +E+ Y AE ++E D F++ GFW RRG+ + TG V A MP+LA +ARL+ G+EA+SCQAERNFSAL+ LIG++R M + KVE+MM +RLN+ + E+ + + +A+ + + + Q E A I++ L
Sbjct: 85 ASKRKKLSRLEERRAARVAAASDGGASGSVQAQGS--ATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDLSL 269
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.200e-29 Identity = 76/187 (40.64%), Postives = 115/187 (61.50%), Query Frame = 3
Query: 384 AKKPRVLSVMEQRRANRLAAAGSAGAAGDEAESGSGPSITHKVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
A K + LS +E+RRA R+AAA GA+G GS + +V + +E+ Y AE ++E D F++ GFW RRG+ + TG V A MP+LA +ARL+ G+EA+SCQAERNFSAL+ LIG++R M + KVE+MM +RLN+ + E+ + + +A+ + + + Q E A I++ L
Sbjct: 650 ASKRKKLSRLEERRAARVAAASDGGASGSVQAQGS--ATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDLSL 834
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.620e-29 Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 3
Query: 507 KVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
+V + +E+ Y AE +L+ DGF+L GFW RRG+ + ATG+V A MP+LA +ARL+ G+EATSCQAERNFSALA LIGN+R M +VE+MM +RLN+R + E+ A++ + R + + + AQ E A I+I L
Sbjct: 398 RVLIEREMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATKNAAKSAAAQEERANKPIDISL 543
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 120 bits (302), Expect = 7.560e-27 Identity = 65/146 (44.52%), Postives = 95/146 (65.07%), Query Frame = 3
Query: 507 KVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
+V + +E+ Y AE +++ D F+L GFW RRG+ +S ATG+V A MP+LA +ARL+ G+EATSCQAERNFSALA LIG++ M + +VE+MM +RLN+ + E+ AY+ + +A E + AQ E A I++ L
Sbjct: 502 RVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEERANTAIDVSL 647
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 119 bits (297), Expect = 2.080e-26 Identity = 65/151 (43.05%), Postives = 96/151 (63.58%), Query Frame = 3
Query: 492 PSITHKVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLNQRYIPEIAAYNRVIDRQQARRNQCREDTGKAQNEAAGDLIEIDL 944
P V + +E+ Y AE +++ DGF+L GFW RRG+ + TG+V A MP+LA +ARL+ G+EATSCQAERNFSALA LIG +R M A KVE+MM +RLN+ + E+ A + + + +A + ++G AQ + + I++ L
Sbjct: 379 PVTGRHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRALDAAVAQARAMAAKSARESGIAQADRSNKEIDLTL 529
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 108 bits (271), Expect = 9.560e-25 Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 3
Query: 507 KVRVLQELTRYTAEGVELEEDGFSLPGFWRRRGSPKLSQATGEVIEEAAMPHLALLARLYHGVEATSCQAERNFSALALLIGNMRSRMGAFKVEQMMFLRLN 812
+V + +E+ Y AE +++ D F+L GFW RRG+ +S ATG+V A MP+LA +ARL+ G+EATSCQAERNFSALA LIG+ R M + +VE+MM +RLN
Sbjct: 119 RVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig826.19671.1 >prot_F-serratus_M_contig826.19671.1 ID=prot_F-serratus_M_contig826.19671.1|Name=mRNA_F-serratus_M_contig826.19671.1|organism=Fucus serratus male|type=polypeptide|length=225bp MIGMCVGLVHEALLSQRFKTDQNRREARDSLVATGPLAKKPRVLSVMEQRback to top mRNA from alignment at F-serratus_M_contig826:334204..335150+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig826.19671.1 ID=mRNA_F-serratus_M_contig826.19671.1|Name=mRNA_F-serratus_M_contig826.19671.1|organism=Fucus serratus male|type=mRNA|length=947bp|location=Sequence derived from alignment at F-serratus_M_contig826:334204..335150+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig826:334204..335150+ >mRNA_F-serratus_M_contig826.19671.1 ID=mRNA_F-serratus_M_contig826.19671.1|Name=mRNA_F-serratus_M_contig826.19671.1|organism=Fucus serratus male|type=CDS|length=1350bp|location=Sequence derived from alignment at F-serratus_M_contig826:334204..335150+ (Fucus serratus male)back to top |