mRNA_F-serratus_M_contig826.19669.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig826.19669.1
Unique NamemRNA_F-serratus_M_contig826.19669.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: D8LTI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI6_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 1.230e-111
Identity = 284/651 (43.63%), Postives = 333/651 (51.15%), Query Frame = 1
Query:  718 VIPTVEELISRTQAEAGDAQAATKGIIPRLHQRLIDEH--------GECMGIPQTGRGGGGLAWRSSSLHG--------------------RKEQAEWSLCDSRTAHCTQRGFQGSEFSCGYRNIQMMCSALMEWPEYRRVLFGGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESSA-----------ASPEMPEQVGKENAPAGGNRHSLCA-PEGS--------GPPLIALRCDRLGSSPLNP--IQQQQQQSMRSYLVSPDTTGGTGRHGSDNCKKKSKPASGGGLITGAGVRLDGYRRLEPRTDTPRPANSNCSGGVGSATCSWRTNSRTLGGGRWRGESIGGR-------------GERWGKDTGRKAGQRMGRAIVEWAWEYFCTSWGDAEVFGDDVV-GERGLPMAIGEQTKKIK------------------------------------SENLPATQTRPPPPLYFQHDGHSRSIVGVLLPGGAGQVAGQGSRGRCQAGAXXXXXXXXXXXXXXXXXXXXXKGGIHRRRTGSLLVFDPSQHGSDISRALDGERTKRSWNSMLKRGENTLHRRQFQVVAVRPGLIEAGRASGWKKLVSSKISVE 2370
            ++PT  EL +RT A  GD  + T G+IPR+H+RL+ EH        G   G   TG G  G+  R + + G                        AEW LCD RT HCTQRG  GS FSCGYRNIQM+CSALMEWPEY+RVLFGGSG +PGV LLQCWIERAWADG+DP+GC QLGG GALMGSE WIGATECA LLR   SFGVKA+VIDFESSA           ++ E PE   K   P+   R  L   P GS        GP  +       G   +     Q   QQS+R +L S  +   T R   D     S    GG +I G G  L G           R  N     G G A    R    + GGGR                        R     G+ AG RMG+A+  WAWEYFCT WG AE     +  G++G  + +       +                                    ++      TRPPPPLYFQHDGHSRSIVGVL PGGAGQ   +G R       XXXXXXXX XXXXXXXXXXXX GG   R+   L VFDPS  G  I  ALD  +  R W   LKRG + LHRRQFQ+VAVRPGL++AG+A  WK++VS KI V+
Sbjct:   25 LVPTRAELKARTVAAGGDRLSTTPGLIPRIHERLLGEHNARGSGRGGGVRGNTTTGGGSLGVRERQTFMRGWGRGGFDMSVTSDFAGGGARAATAAEWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKRVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGLGALMGSETWIGATECATLLR---SFGVKAEVIDFESSAPLAPAFAGEASSAQEEPEGGSKRKTPSSAPRSPLSLHPNGSTSSRAWPSGPSSLDAYPSSNGGRGVQASVAQGPVQQSIRPFLPSSSSPSSTPR---DRSAVTSWTQPGGAII-GIGGGLGGQHERRWPGAGQRLGNGGRGRGRGVAG---RDGFLSDGGGRXXXXXXXXXXXXXXXXXXXXXXAHRKNGYIGKDAGDRMGKALAAWAWEYFCTPWGTAEGSSSSIGDGDKGAELLLPPSRPPSQLREPGGSGGGNACSGRXXXXXXXXXXXXXXXXXXTATDRRAEAWTRPPPPLYFQHDGHSRSIVGVLQPGGAGQ---RGGRSGXXXXXXXXXXXXXIXXXXXXXXXXXXXGGAGSRQAACLFVFDPSHAGGPIRDALDDTQNGR-WGRFLKRGGHALHRRQFQMVAVRPGLVDAGQADAWKRIVSEKIVVD 661          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A1Y1HYU7_KLENI (ZZ-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYU7_KLENI)

HSP 1 Score: 144 bits (364), Expect = 5.830e-32
Identity = 133/459 (28.98%), Postives = 191/459 (41.61%), Query Frame = 1
Query:  985 FSCGYRNIQMMCSALMEWPEYRRVLFGGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESSAASPEMPEQVGKENAPAGGNRHSLCAPEGSGPPLIA----------------LRCDRLGSSPLNPIQQQQQQSMRSYLVSPDTTGGTGRHGSDNCKKKSKPASGGGLITGAGVRLDGYRRLE-PRTDTPRPANSNCSGGVGSATCSWRTNSRTLGGGRWRGESIGGRGERWGKDTGRKAGQRMGRAIVEWAWEYFCTSWGDAEVFGDDVVGERGLPMAIGEQTKKIKSENLPATQTRPPPPLYFQHDGHSRSIVGVLLPGGAGQVAGQGSRGRCQAGAXXXXXXXXXXXXXXXXXXXXXKGGIHRRRTGSLLVFDPSQHGSDISRALDGERTKRSWNSMLKRGENTLHRRQFQVVAVRPGL 2310
            + CG+RNIQM+CS L+E PE    +FGG G VP +  LQ W+E+AW +GFD  G +QLG    +  ++KWIG TECAALLR   SFG++A + DF +S    +   + G   A   G        +G+ P  I                 ++CD  G   +NPI+  + +S             T +   D C++    A       G   RL  Y +++ P     +  ++   GG GS     RT S                           A   M   ++EW W+YF T  G AE    D   E     A   Q + +   N P        PLYFQH+GHSR+IVG+              R R +  A                                LL+ DPSQ  +++  AL   R K+ W  ++KRG +TL + ++Q+  V PG+
Sbjct:  237 WGCGWRNIQMLCSNLVEDPEICGAIFGGRGTVPEIPELQKWLEQAWKEGFDVMGADQLGWN--VRETQKWIGTTECAALLR---SFGLRARIADFRASNVRNKREPRGGDSQAGDRGQSAKRPRTDGAAPAEITGGNQDGDHRDHAVHSGVQCDHCG---MNPIRGARFKS-------------TVKDNFDLCEQCKDVADDQEASRGV-TRLHLYLKMDTPHVMEDKTESTQKGGGAGSGA---RTES---------------------------ANAHM--RLIEWVWKYFTTGAGAAE----DSEAEE----APTNQRRHVIMSNRP--------PLYFQHEGHSRTIVGI-------------ERRRSRPDAPEEAF---------------------------LLILDPSQRTAEVVEAL---RQKKGWQRLIKRGVHTLRKPEYQLCFVEPGI 582          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A7S1C6F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6F5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 7.580e-28
Identity = 69/135 (51.11%), Postives = 89/135 (65.93%), Query Frame = 1
Query:  880 AWRSSSLHGRKEQAEWSLCDSRTAHCTQRGFQGSEFSCGYRNIQMMCSALMEWPEYRRVLFGGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESSAA 1284
            ++R  S + RK   +  LC   T   +QRG +G+ F+CGYRNIQM+CSAL+  P +R  LFGG   +P V  LQ WIERAW+ GFDP G  QLG   +L+G+ KWIG  ECAALLR   SFG+ A+++DF  S A
Sbjct:  242 SYRHLSSNLRKRHPQHLLCGP-TTFFSQRGVEGAGFACGYRNIQMLCSALVRHPPFRDALFGGLDTIPDVPSLQGWIERAWSLGFDPLGAAQLGH--SLVGTSKWIGTMECAALLR---SFGIPAEIVDFAPSRA 370          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A6H5JIH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH7_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 4.190e-27
Identity = 70/158 (44.30%), Postives = 87/158 (55.06%), Query Frame = 1
Query:  691 DGDRASTGI------VIPTVEELISRTQAEAGDAQAATKGIIPRLHQRLIDEHGECMGIPQTGRGGGGLAWRSSS--LHGRKEQ-----------------------------AEWSLCDSRTAHCTQRGFQGSEFSCGYRNIQMMCSALMEWPEYRR 1053
            +G R +TG       ++PT  EL +RT A  GD Q+ T G+IPR+H+RL+ EH        +GRGGGG   R++     G +E+                             AEW LCD RT HCTQRG  GS FSCGYRNIQM+CSALMEWPEY+R
Sbjct:   10 EGVRKTTGSSIGGSSLVPTRAELEARTVAAGGDHQSTTPGLIPRIHERLLGEHN----ARGSGRGGGGRGNRAADGGPTGVRERQTFMRGGERGGCDSSVTSDFAGXXXXXXXAEWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYKR 163          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: UPI000D1C6536 (zinc finger with UFM1-specific peptidase domain protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6536)

HSP 1 Score: 127 bits (319), Expect = 9.000e-27
Identity = 132/467 (28.27%), Postives = 180/467 (38.54%), Query Frame = 1
Query:  985 FSCGYRNIQMMCSALMEWPE-YRRVLFGGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESSAASP--EMPEQVGKENAPAGGNRHSLCAPEGSGPPLIALRCDRLGSSPLNP--IQQQQQQSMRSYLVSPDTTGGTGRHGSDNCKKKSKPASGGGLITGAGVRLDGYRRLEPRTDTPRPANSNCSGGVGSATCSWRTNSRTLGGGRWRGESIGGRGERWGKDTGRKAGQRMGRAIVEWAWEYFCTSWGDAEVFGDDVVGERGLPMAIGEQTKKIKSENLPATQTRPPPPLYFQHDGHSRSIVGVLLPGGAGQVAGQGSRGRCQAGAXXXXXXXXXXXXXXXXXXXXXKGGIHRRRTGS-----LLVFDPSQHGSDISRALDGERTKRSWNSMLKRGENTLHRRQFQVVAVRPGLIEAGRASGWKKLVSS 2355
            + CG+RNIQM+ S L+   E YR+ LFGG+GFVP +  LQ W+E AW+ GFD +G E   G  A+ GS+KWIG TECAALLR    FGV+A ++DF++   +   ++P    K  A   G R    +  G      A  CD  G  P+        +QQ      V               C K ++P            R   + R+E      +P+   C G                                   D      QR+    V+W W Y+       E   D V  E   P+ I  +                 PPLYFQH GHSR+IVG+                                                RR+ G      LLVFDPSQ   ++ +AL   R K  W  ++KRG +TL R  +QV  + PG+ +       K L S+
Sbjct:  187 WGCGWRNIQMLSSYLLARDEAYRKALFGGAGFVPTIAALQQWLEIAWSKGFDSDGAEHFNG--AIYGSQKWIGTTECAALLRL---FGVRARIVDFKALTRTTGGKVPS---KRVAKRAGPRQQNDSERGIVQHWNA-HCDSCGMYPIRGPRFSSSKQQDCDLCFV---------------CFK-NQPG-----------RSHEFERIE------KPSPKACGG-----------------------------------DFEDYNHQRL----VDWVWNYYT------EEDRDHV--ENRQPLVIISRR----------------PPLYFQHQGHSRTIVGIQ----------------------------------------------RRRKLGGPEEAFLLVFDPSQRTEELVKAL---RAKTGWQKLIKRGVHTLKRAAYQVCHIDPGIAQGKELENLKNLSST 499          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A1D1YG17_9ARAE (Zinc finger with UFM1-specific peptidase domain protein n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YG17_9ARAE)

HSP 1 Score: 125 bits (314), Expect = 1.590e-26
Identity = 127/474 (26.79%), Postives = 173/474 (36.50%), Query Frame = 1
Query:  973 QGSEFSCGYRNIQMMCSALM-EWPEYRRVLFGGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESSAASPEMPEQVGKENAPAGGNRHSLCAPEGSGPPLIALRCDRLGSSPLNPIQQQQQQSMRSYLVSPDTTGGTGRHGSDNCKKKSKPASGGGLITGAGVRLDGYRRLEPRTD--------TPRPANSNCSGGVGSATCSWRTNSRTLGGGRWRGESIGGRGERWGKDTGRKAGQRMGRAIVEWAWEYFCTSWGDAEVFGDDVVGERGLPMAIGEQTKKIKSENLPATQTRPPPPLYFQHDGHSRSIVGVLLPGGAGQVAGQGSRGRCQAGAXXXXXXXXXXXXXXXXXXXXXKGGIHRRRTGSLLVFDPSQHGSDISRALDGERTKRSWNSMLKRGENTLHRRQFQVVAVRPGLIEAGRASGWKKLVSSKISV 2367
            + S + CG+RNIQM+CS LM E  E + V+FGGSGFVP +  LQ W+E AW  GFD  G +       + GS+KWIGATECA LLR   SFG++A ++D +S                                        +++GSS        Q    R  LV             D  K+KSK  SG          ++G  RL             +  P N NC                                        R  G R+   +V+W W YFC+           V G+    + + E+                  PLYFQH GHSR+IVG+ +  G   V G                                          +LLV DP Q  + + R+L   R K  W  ++KRG +TL + Q+Q+  V PG+         K L S  I +
Sbjct:  142 EDSGWGCGWRNIQMLCSHLMMERQEAKEVMFGGSGFVPDIPSLQRWLEIAWERGFDGPGAKSFNK--RVYGSKKWIGATECATLLR---SFGLRARIVDLDS----------------------------------------EKIGSS--------QSLGQRVRLV-------------DEVKRKSKQVSGPMDKFLLHSDMNGKGRLATHISANFYTKHTSDGPDNDNC--------------------------------------LRRAKGPRI---LVDWVWNYFCSG----------VSGKSTHQVTVSEKM-----------------PLYFQHSGHSRTIVGIQMKKG---VQGMPD-------------------------------------VYNLLVLDPGQSTAALERSL---REKNGWQQLIKRGLHTLKKPQYQLCYVDPGIAHGAEMEDLKILDSVLIKI 438          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A7S4DCM4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCM4_HETAK)

HSP 1 Score: 117 bits (293), Expect = 1.730e-26
Identity = 61/109 (55.96%), Postives = 72/109 (66.06%), Query Frame = 1
Query:  973 QGSEFSCGYRNIQMMCSALMEWPEYRRVLF-------GGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESS 1278
            +G ++SCGYRNIQM+C AL+  PEYRRVLF       G +   PGV  LQ W+ERAWA GFDP G     G G + G E WIGATE  ALLR   SFGV+A V+DF+ S
Sbjct:    8 EGLQWSCGYRNIQMLCDALLRRPEYRRVLFEGAYARPGAAARAPGVRALQGWLERAWALGFDPAGAALFPG-GRVAGGEAWIGATEAVALLR---SFGVRAQVVDFDES 112          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A835YSB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.150e-24
Identity = 87/229 (37.99%), Postives = 103/229 (44.98%), Query Frame = 1
Query:  739 LISRTQAEAGDAQAATKGIIPRLHQRLIDEHGECMGIPQTGRGGGGLAWRSSSLHGRKEQAEWSLCDSRTAHCTQRGFQGSE-FSCGYRNIQMMCSALMEWPEYRRVLFGGSGFV-----------------------------------PGVLLLQCWIERAWADGFDPEGCEQLGGP----------------GALMGSEKWIGATECAALLRQAGSFGVKADVIDF 1269
            L+  T  E GDA+A T  ++  L  RL+             R   G A+             ++LC+  TAH TQ    GS  F+CGYRNIQMMC+ LM  P YRRVLFGG+G V                                   PGV LLQ W ERAW  GFD  G EQ                    G L G+ KWIGATECAALLR    FGV+A+V+DF
Sbjct:  238 LVEHTAREGGDAKARTNDVMRLLRDRLL-----------AARRQEGPAYA------------FALCELSTAHYTQCSDAGSRWFACGYRNIQMMCATLMTIPAYRRVLFGGTGVVSGAALLQVCTPQQKHLKFDSVIRALPSPLASPQVVPGVALLQAWTERAWEAGFDTAGQEQSIAACVSMTVWRMCAARVQVGPLQGTSKWIGATECAALLRY---FGVRAEVVDF 440          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A2P6V7W2_9CHLO (Zinc finger with UFM1-specific peptidase domain n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V7W2_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 1.700e-24
Identity = 123/482 (25.52%), Postives = 176/482 (36.51%), Query Frame = 1
Query:  979 SEFSCGYRNIQMMCSALMEW-PEYRRVLFGGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESSAASPEMPEQVGKENAPAGGNRHSLCAPEGSGPPLIALRCDRLGSSPLNPIQQQQQQSMRSYLVSPDTTGGTGRHGSDNCKKKSKPASGGGLI---TGAGVRLDGYRRLEPRTDTPRPANSNCSGGVGSATCSWRTNSRTLGGGRWRGESIGGRGERWGKDTGRKAGQRMGRAIVEWAWEYFCTSWGDAEVFGDDVVGERGLPMAIGEQTKKIKSENLPATQTRPPPP-----------------LYFQHDGHSRSIVGV---LLPGGAGQVAGQGSRGRCQAGAXXXXXXXXXXXXXXXXXXXXXKGGIHRRRTGSLLVFDPSQHGSDISRALDGERTKRSWNSMLKRGENTLHRRQFQVVAVRPGLIEAGRASGWKKLVS 2352
            S + CGY NIQ + + L+   PE  + LFGG+G+ P +  LQ W+E AW  G+DPEG EQL     + G++KWIG TE AALLR    FG++A V+DF     +P +          AG          G+ P    + CD  G  P+                             D  K +S+P      +     A   +  +RR+ P       A    SGG G   CS                         G+  G  A + + R +++W W YF +   D         G+                         PP P                 LYFQH+GHSR+I+G+   LL                                           G  R+   +LLV DP   G+ ++ AL     +  W  +LKRG +TL   Q+Q++ V PGL         K++V+
Sbjct:  277 SGWGCGYNNIQTLTTHLLAVRPEAGQALFGGAGWAPDIPALQAWLEAAWQAGYDPEGAEQL--ERRVQGTQKWIGTTEAAALLRH---FGLRAQVVDF----GAPNVLRGA------AGTAXXXXXXXXGTQPVHPGVECDACGQCPIR---------------------------GDRFKSESRPEYDFCAVCHTAPAAAAVGPFRRMMPG------AVMTASGGGGDQGCSS------------------------GQQGGASA-ESVARQLLQWVWRYFTSE--DTAEQPSSSAGDGXXXXXXXXXXXXXXXXXXXXXXXAPPAPKRLCLRQSPVRVSGKPALYFQHEGHSRTIIGIERRLL-------------------------------------------GPERQPQYTLLVLDPGMPGAALAAALA---QRSGWQRLLKRGPHTLRHGQYQLLYVAPGLAGPDERQRLKRVVA 637          
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Match: A0A2P6TIH3_CHLSO (Zinc finger-containing ubiquitin peptidase 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TIH3_CHLSO)

HSP 1 Score: 121 bits (303), Expect = 1.100e-23
Identity = 122/476 (25.63%), Postives = 176/476 (36.97%), Query Frame = 1
Query:  979 SEFSCGYRNIQMMCSALMEW-PEYRRVLFGGSGFVPGVLLLQCWIERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADVIDFESSAASPEMPEQVGKENAPAGGNRHSLCAPEGSGPPLIALRCDRLGSSPLNPIQQQQQQSMRSYLVSPDTTGGTGRHGSDNCKKKSKPASGGGLITGAGVRLDGYRRLEPRTDTPRPANSNCSGGVGSATCSWRTNSRTLGGGRWRGESIGGRGERWGKDTGRKAGQRMGRAIVEWAWEYFCTSWGDAEVFGDDVVGERGLPMAI-------------------------------GEQTKKIKSENLPATQTRPPPPLYFQHDGHSRSIVGVLLPGGAGQVAGQGSRGRCQAGAXXXXXXXXXXXXXXXXXXXXXKGGIHRRRTGSLLVFDPSQHGSDISRALDGERTKRSWNSMLKRGENTLHRRQFQVVAVRPGL 2310
            S + CGY NIQM+CS L+   PE R  LFGG+GFVP +  LQ W+E AW  G+DP+G EQLG    + G++KWIG+TE AALLR    FG++A + DF  S+A   M  +        G +        G+ P    + CD  G  P+                             D  K +S P      +  A     G++   P      P     + GVG                               + +G  A Q     ++ W W YF    G +   G           ++                               G  +K+ K +           PLYFQH+GHSR+IVG+       +  G+                                    RR   +LLV DP    + ++ AL    +++ W  +LKRG +TL   Q+Q+V V+PG+
Sbjct:  264 SGWGCGYNNIQMLCSHLLAARPEARAALFGGAGFVPDIPALQAWLEAAWQAGYDPQGAEQLGS--RVQGTQKWIGSTEAAALLR---FFGLRAQIADFGVSSA---MAAEAAXXXXXXGSS--------GAVPVHPNVACDGCGQCPIQ---------------------------GDRYKSQSLPDFD---LCSACHSKGGWQAQAP-FQRMLPGAMRAAAGVGQPIT---------------------------RGSGSVADQ-----LLRWVWRYFTGEGGCSAAGGXXXXXXXXXXXSMQPGSGPGSDAPXXXXXXXXXXXXXXXXXVSGGPASKRPKLQAPELVHLSGKVPLYFQHEGHSRTIVGIER-----RTVGR-----------------------------------ERRVEYTLLVLDPGTPAAKLAAALH---SRQGWQRLLKRGAHTLRHGQYQLVWVQPGM 617          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTI6_ECTSI1.230e-11143.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y1HYU7_KLENI5.830e-3228.98ZZ-type domain-containing protein n=1 Tax=Klebsorm... [more]
A0A7S1C6F5_9STRA7.580e-2851.11Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6H5JIH7_9PHAE4.190e-2744.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000D1C65369.000e-2728.27zinc finger with UFM1-specific peptidase domain pr... [more]
A0A1D1YG17_9ARAE1.590e-2626.79Zinc finger with UFM1-specific peptidase domain pr... [more]
A0A7S4DCM4_HETAK1.730e-2655.96Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YSB8_9STRA1.150e-2437.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P6V7W2_9CHLO1.700e-2425.52Zinc finger with UFM1-specific peptidase domain n=... [more]
A0A2P6TIH3_CHLSO1.100e-2325.63Zinc finger-containing ubiquitin peptidase 1 n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig826contigF-serratus_M_contig826:254977..262898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.0
Seed ortholog evalue4.2e-104
Seed eggNOG ortholog2880.D8LTI6
Preferred nameZUFSP
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016579,GO:0016787,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070646,GO:0070647,GO:0071108,GO:0071704,GO:0101005,GO:0140096,GO:1901564,GO:1990380
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsKOG4696@1,KOG4696@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size4946
Cds size2313
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932453.575083-UTR-F-serratus_M_contig826:254976..2550361622932453.575083-UTR-F-serratus_M_contig826:254976..255036Fucus serratus maleUTRF-serratus_M_contig826 254977..255036 +
1690964316.2319226-UTR-F-serratus_M_contig826:254976..2550361690964316.2319226-UTR-F-serratus_M_contig826:254976..255036Fucus serratus maleUTRF-serratus_M_contig826 254977..255036 +
1622932453.6920786-UTR-F-serratus_M_contig826:260325..2628981622932453.6920786-UTR-F-serratus_M_contig826:260325..262898Fucus serratus maleUTRF-serratus_M_contig826 260326..262898 +
1690964316.302174-UTR-F-serratus_M_contig826:260325..2628981690964316.302174-UTR-F-serratus_M_contig826:260325..262898Fucus serratus maleUTRF-serratus_M_contig826 260326..262898 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932453.5949762-CDS-F-serratus_M_contig826:255036..2556671622932453.5949762-CDS-F-serratus_M_contig826:255036..255667Fucus serratus maleCDSF-serratus_M_contig826 255037..255667 +
1690964316.245617-CDS-F-serratus_M_contig826:255036..2556671690964316.245617-CDS-F-serratus_M_contig826:255036..255667Fucus serratus maleCDSF-serratus_M_contig826 255037..255667 +
1622932453.6171584-CDS-F-serratus_M_contig826:257151..2575121622932453.6171584-CDS-F-serratus_M_contig826:257151..257512Fucus serratus maleCDSF-serratus_M_contig826 257152..257512 +
1690964316.2633307-CDS-F-serratus_M_contig826:257151..2575121690964316.2633307-CDS-F-serratus_M_contig826:257151..257512Fucus serratus maleCDSF-serratus_M_contig826 257152..257512 +
1622932453.63257-CDS-F-serratus_M_contig826:257892..2580751622932453.63257-CDS-F-serratus_M_contig826:257892..258075Fucus serratus maleCDSF-serratus_M_contig826 257893..258075 +
1690964316.272804-CDS-F-serratus_M_contig826:257892..2580751690964316.272804-CDS-F-serratus_M_contig826:257892..258075Fucus serratus maleCDSF-serratus_M_contig826 257893..258075 +
1622932453.6476429-CDS-F-serratus_M_contig826:258912..2599171622932453.6476429-CDS-F-serratus_M_contig826:258912..259917Fucus serratus maleCDSF-serratus_M_contig826 258913..259917 +
1690964316.2821732-CDS-F-serratus_M_contig826:258912..2599171690964316.2821732-CDS-F-serratus_M_contig826:258912..259917Fucus serratus maleCDSF-serratus_M_contig826 258913..259917 +
1622932453.6705456-CDS-F-serratus_M_contig826:260192..2603251622932453.6705456-CDS-F-serratus_M_contig826:260192..260325Fucus serratus maleCDSF-serratus_M_contig826 260193..260325 +
1690964316.291621-CDS-F-serratus_M_contig826:260192..2603251690964316.291621-CDS-F-serratus_M_contig826:260192..260325Fucus serratus maleCDSF-serratus_M_contig826 260193..260325 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig826.19669.1prot_F-serratus_M_contig826.19669.1Fucus serratus malepolypeptideF-serratus_M_contig826 255037..260325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig826.19669.1

>prot_F-serratus_M_contig826.19669.1 ID=prot_F-serratus_M_contig826.19669.1|Name=mRNA_F-serratus_M_contig826.19669.1|organism=Fucus serratus male|type=polypeptide|length=771bp
MRENIQGVHEQIPGETHSSDFATRDRLDGKPKRRKRDEKIETTHASESDI
PVVITTIDDHSPANSPPKSVSEIFSYPLVCTKCTFINRVSQAPGLPLTTA
CAVCLEPIQISNTTTSSAGYTMSEVSVGEVLGESISAKCPTCTVILMDGI
NATVCYVCGSLLASFSQSKMTKNLPPEEWWECSTCTLRNGPRTTVCHACE
TPLANVAIPPDGDRASTGIVIPTVEELISRTQAEAGDAQAATKGIIPRLH
QRLIDEHGECMGIPQTGRGGGGLAWRSSSLHGRKEQAEWSLCDSRTAHCT
QRGFQGSEFSCGYRNIQMMCSALMEWPEYRRVLFGGSGFVPGVLLLQCWI
ERAWADGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQAGSFGVKADV
IDFESSAASPEMPEQVGKENAPAGGNRHSLCAPEGSGPPLIALRCDRLGS
SPLNPIQQQQQQSMRSYLVSPDTTGGTGRHGSDNCKKKSKPASGGGLITG
AGVRLDGYRRLEPRTDTPRPANSNCSGGVGSATCSWRTNSRTLGGGRWRG
ESIGGRGERWGKDTGRKAGQRMGRAIVEWAWEYFCTSWGDAEVFGDDVVG
ERGLPMAIGEQTKKIKSENLPATQTRPPPPLYFQHDGHSRSIVGVLLPGG
AGQVAGQGSRGRCQAGAGAGRSKANSARGRAARGSGGGKGGIHRRRTGSL
LVFDPSQHGSDISRALDGERTKRSWNSMLKRGENTLHRRQFQVVAVRPGL
IEAGRASGWKKLVSSKISVE*
back to top

mRNA from alignment at F-serratus_M_contig826:254977..262898+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig826.19669.1 ID=mRNA_F-serratus_M_contig826.19669.1|Name=mRNA_F-serratus_M_contig826.19669.1|organism=Fucus serratus male|type=mRNA|length=7922bp|location=Sequence derived from alignment at F-serratus_M_contig826:254977..262898+ (Fucus serratus male)
CGGTAGTCGAGTACTGTTTTCTTCTCTCGGGAACGAAGGCTATGCTTCAC CCCAGCGACAATGCGGGAAAATATTCAGGGTGTGCACGAACAAATTCCGG GAGAGACGCACTCATCAGATTTCGCGACGCGCGATCGATTAGATGGAAAA CCCAAGCGTCGTAAGAGAGATGAAAAAATCGAGACAACTCATGCGTCTGA GAGCGACATTCCGGTCGTGATTACCACCATTGACGACCACTCACCCGCCA ATTCCCCTCCGAAGAGCGTATCGGAGATATTTTCCTACCCTCTGGTGTGT ACTAAGTGCACTTTTATCAACCGCGTAAGCCAGGCACCTGGACTACCCTT AACCACCGCCTGTGCGGTGTGTCTTGAGCCCATTCAAATAAGCAACACAA CCACTTCTTCTGCCGGCTACACGATGTCGGAGGTGAGCGTGGGCGAAGTG TTGGGCGAGAGCATCTCAGCGAAGTGCCCGACCTGCACCGTGATATTGAT GGACGGGATAAATGCTACGGTTTGCTACGTTTGCGGCTCACTTTTGGCAT CCTTTAGCCAATCCAAGATGACGAAGAATTTGCCGCCGGAGGAGTGGTGG GAGTGCAGTACGTGCACGCTTCGAAACGGTCCTAGAACGACCGTTTGCCA TGCTTGTGAGACCCCGCTGGCCAACGTCGCCATCCCACCCGGTCCGTGCC CGAATCATACTGGTATAGTGTGGAACTGGTACAAACATGTCTTGCAAACC GAAAAAAACGATCGTTTTAGGGGATACGGATACGGATATTGCCGTTACTT TCAACATGCCCACTTCATACCAATAGCAGTAGCAGAGTAGTGGGTGTCGG AAAGAGAGGCGTATATTAATTGGTCAGCGCCGGTCGACCCCGGTAGCTCA GAAGGCACCTCGTAACCTTCTGACACGTTGGGACTTGAGTTCGATCCCGG CAAACGGGATTTTTCTCACTAAAAAACTAAAAAACCAAAATAAAAATGCC CAACGGGTGGAGAACGATTAATCCGTTAGTACACAAAATTCGACTTCACG GTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGACAAAAATCAAGG CACGCACCGCAGAATGAAGGTGGATGAAAAATCCTGTGTGACCTTCCTCC TGTGTGACCCCGGCTGGTACGTCCAACGAACTTGATGTCCAGAATGGATG GGAAGAAAACACAACACACATGGTGACCTGCTAAGGCAGCAGCACTCGTT CGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGACGGACTCTCGGCAGT GAACGCCATCGGTACGCAACTGCGTGACCCGATAAACTCGGGACCTACCC GATGGCGTATGGCGGTTTAATATAAATATATGGACGCCGTCGCGGAACTC GGGAGGAATCCCGCAAGTAAGCACCAGATTCAGCCTGAGTATGGAGAGGA GCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAAATT CTCAGGCACGAACGCGGACAGGGGAATGTTATTTTCCCTGTTCAGCTGGC CACGAGCAGGATTGGCAGCCTTACCAGGTTGATCCATACTCTTGCTATAT ATGTGACCATACATACATACATCGCGAAGCCGTGAATGCTGTCGAGCGGG GTTTGCAGAAAATTAGGAGTTCGAGTCTCACACGTGGCGAGTTGTTGTTT TTCCTTCTTGATAACGGAAATGCTCAAAAAGCTGACTCGTATGAAACTGT ACTGTTTAGTGAACGACGAGTACTGTGCTGGAGGGGTGCTTGAATTGCAA TATACAAACCGCGTAGGCTTGAAGCGGGGAGATATGCTATTAATAGAAGG CTGAGTCATCCAGGACCGTAGAAAAGGAGATATGAAAGAGAAAAAAAAAT GACCTTACTGCAATAATCTCTCCGCTGCCGGTTGTAGCACTGTACGTGTT GACGGCACGCGATCTGTAAATGCGCCCACGCCCTCATGTTCGAGTACCGA CGGGCCTGTTGACGTGACTGCTCAGGCGGTGTCCCACACATTTCCTCCAT GACTTACCTACACACACATGCGCTCGCGGCTCATCTCAGTCGTGGTGGTA CTCTGACCTCGCTGCCTCAGAATATAAATATGTTTTTGCATATCCACATT ATTCTCACGTTCATGCGGCGGCTAGACGGCGATCGCGCGAGTACCGGGAT CGTGATTCCCACAGTGGAAGAATTGATATCGAGAACCCAAGCCGAGGCGG GGGACGCCCAGGCCGCTACGAAGGGTATCATCCCCCGATTACATCAACGT CTCATAGACGAACACGGGGAATGCATGGGGATACCACAAACGGGACGCGG CGGAGGTGGCTTGGCGTGGCGGTCAAGCAGTCTACACGGGAGAAAAGAGC AGGCAGAATGGAGTCTGTGCGATTCGCGCACGGCCCACTGTACGCAGCGG GGATTCCAGGGGTCCGAGTTCTCGTGCGGATACCGAAACATCCAGATGAT GTGCTCCGCGCTGATGGAATGGCCGGAGTATCGCAGGTCAGCTCGCGAAT TCCGGCTTTTGGGTCTTCCACGTGTTGGCATTGTATTTTAATTTGTTTTT AACACAAATCCATTCAATCCTCCCGCCACGGACCACGACGGATTTTTATT TGCAGAGACGTTCGCGGGTCGCCGCTGTTTGTTTTGCCCAAGTTTCGCGT TCGTGGATAGAATGTTCCTGTATGGTTTCGCTGCCGTTAAAAGTACATTA AAGAGCTACGTGCAAAATACTGTATAATGAAAGGCGTCCCGCTGTATGAA CACGGCGCCTGAAATACCGCCCTCTTGCACTCGTGCTCCCATAAATTTCT CCCCGCTTTGCTCGCGACACGCCTGCTTTTCTCCTCCCGCGACTGGAACC ATCACGAGCAATCCAGAGTGCTCTTCGGGGGCAGCGGTTTCGTCCCCGGA GTTTTGCTGCTGCAGTGTTGGATAGAACGGGCGTGGGCAGACGGCTTCGA TCCGGAGGGCTGCGAACAGCTTGGCGGGCCCGGGGCGCTCATGGGAAGCG AGAAATGGATAGGAGCGACAGAGTGCGCCGCACTCTTAAGGCAAGCAGGG TAGAACCCTCCTGGAAGCCATATCTCTGCTGTGACTTGTACACGCTTGTC GCTGTGGTGGTGTGCATGCCAACATCACGCCGCACGAGGTTTATTGAGAG GCATGGATAGCGTGCCGAATCATTTTCTGCCTCCCGTCGGGAACCGGAGG AAGATCGATGATGTTGAGGGGATGGAAGGATATGTCGTTTCTAGCTCGCC AAATTTTGCAACCGTCGATGCCTCGGGATCCATTGCGGCCCGATCCGATC GATCGGTTAGCTATCACAACGCACTGAAAGGCAGACATACTGTCTTCCCT CTCTCCACCGCCGAAGGCTCTAATTTCAACATGCCCACTTCATACCAATA GTGGGCATGGGAAAGAGAGGCGCATATTAGTTGGTCCATGGTGACCTGCC AAGGCAGCACTCGTTCGGAACTACCTTGAGGTTTACTGGCACTGTGCCGG CGGACTCTTGGCAGTGAACGCCATCGGTACGCAAGTGCTTGACCCGATTA ACTCGGGACTGACCCGATGGCGTATGGCGGTTTAAAAAAAATATATGGAC GCCGCCGCGGAACTCGGGAGGAAACCGTAAGTAAGCACCAGATTCAGCCT GAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAACCCGTCT CGCGAGTCCAAATTCTCAGGCGTGAACGCGGACAGGGAAGTATTCATTTT CACTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGATTGATCC ATACTTTTGTTGTATGTGTGACCATACATACATGTCTCATGCAGCTCGCA ACGGTGCTATTATTTTCCCTTCCATCCTCGCCACAGATCCTTCGGTGTGA AAGCGGACGTGATTGACTTCGAATCGTCCGCTGCTTCTCCCGAAATGCCC GAGCAAGTAGGAAAAGAGAACGCTCCCGCCGGTGGTAACCGCCACTCTCT CTGCGCACCCGAGGGATCCGGACCCCCGCTGATCGCTCTCCGATGCGATC GCTTGGGGTCCTCCCCCCTCAACCCCATCCAACAGCAACAGCAACAATCC ATGAGGTCGTACCTCGTGTCCCCAGACACTACAGGAGGAACCGGGAGACA CGGTAGCGACAACTGCAAAAAAAAATCCAAGCCCGCCAGCGGTGGAGGCT TGATTACAGGCGCCGGAGTACGCCTTGACGGCTACAGAAGACTGGAACCA CGGACGGACACCCCTCGTCCCGCTAATTCCAACTGTTCAGGTGGAGTCGG CAGTGCGACGTGCTCATGGAGAACCAATTCACGTACGCTAGGCGGGGGGC GCTGGCGGGGCGAAAGCATAGGCGGGCGAGGCGAGAGATGGGGCAAGGAC ACGGGAAGGAAAGCGGGGCAACGAATGGGTAGAGCGATCGTAGAGTGGGC GTGGGAGTACTTTTGCACGTCGTGGGGCGACGCGGAGGTCTTTGGGGACG ATGTAGTCGGCGAAAGAGGACTGCCAATGGCGATTGGAGAACAAACAAAG AAGATAAAGAGCGAAAATCTGCCGGCGACCCAGACTCGACCCCCGCCCCC GCTCTACTTCCAGCACGACGGACACTCCAGGTCTATTGTGGGGGTTCTCT TGCCGGGGGGAGCTGGCCAAGTCGCTGGCCAAGGAAGCCGAGGAAGGTGT CAGGCCGGAGCGGGTGCAGGTCGGAGCAAAGCAAACAGTGCTAGAGGTCG TGCCGCGCGAGGGAGTGGGGGCGGGAAAGGGGGCATACATCGGCGGCGTA CGGGGAGTTTACTAGTGTTCGACCCGTCTCAGCACGGGAGCGACATCAGC AGAGCCCTTGACGGAGAAAGAACGAAACGATCCTGGAACAGGTGAGACTA GCTCGAGCTACAGGCGGCGAAGGAAGATCTCTTGGTAATAATGGGCTACA GCCCAAGGAGAGAGTAATCGCGCGCGTGGCTTCGTCCACATTTCCTTGGC GTTGCTCGACGTATGTTCGGTTGCGCCACTGTCGCGAGTAGAGCCAGGCT TGGCGGATGCATCTGATCATGACCCCTATCGATTTGCCTCATTTGTGTAC CTTTCCCTCCCACGTCTCGGTCGGTCGGTCGATCGATCCACCCGTGAACC TGCTCGTGCTTGTCAGTATGTTGAAGCGAGGAGAAAACACTCTGCACAGA CGACAGTTTCAAGTGGTCGCCGTCCGACCAGGGCTAATCGAGGCCGGGAG AGCCAGCGGCTGGAAGAAATTAGTTTCGTCCAAAATTAGCGTCGAGTGAA CTGTTACCTCTTCGAAGGGCGGCCCGAAGACCATACCCCCACGAGAGAAT GTTCTCGGGCAACCCTTGCCCACCAATGATTTGAGGATCATTTTCACTTG GGTAACGAATGCGCCTGCGATGTCTGCGCGTCGTGGGACTTAGTCTGTTG TCTTATGCATGCCCGCGAGCGCAAATATTTCCGGAATATTTCATACTCCG GAGTATGTTTTAGTCGGCACGCGTATATATTTCTACACCTGGAAATATCC TCAGAAAAATGAAAATTGAAAAATGAAAGTGGTTCAGATGTACGACTCCT TGACACATTTTGGCTTTTTGCTTGAGCGCTCTGATTCACCCTTGTAGACT ACTCGACGGGCGTCAGGAGTGTTCGATGATGATAAACCCCAAGCAAGATA GCCCCTATGCCACAAAGAATCAACACAAACCCGTGCCTCAGCAGTACTGA TACCAGACAAGGTACATGTACTTCAAGTACTCATTCAATCAAAAAGGCAA CCCTTGCAATCCATCCTACAATAGTATAGCGGTTTCGCCTCGAAATTACA CCCCCTTACACCCCCCCGTACAAGCGAAGGCACCACCGAGCACATTTTGC TCAGCCAGAAAACACTTGAAAAAAGTGGAGAGGTGGATCGGGCTTTCATA CACTTCAGTCATTACAAGTTTCAGGCAATGACTTAGTCCACTGGTACACG CTGCTTTGATTAAATCCCGAAAAAAGAGCGGCACTCATTGCTGCTGCTCT GGTCGCACTTTATACACCCATGCACCTCACCTGCCTTGCATCTAATTTAT CGCACTCATCAAGGAACAAGCGATAAAATTTCCGGCTCGTGCTTCGACAC CGACTGACGCTGCTATATCTTGAAACGTCGGCACACAATCTCTCACCGCC TAAACCGGGGAACTTACGGTACACACAACCAATCGCATTCAACACAGGTT ATCTTTACAAGTAAAAGGCGGAAGATTCGGGTCCATCCCCACATCACGCG CGCTTGTGATCGCAGTCGCTGTGTCAACCTCCTTCGATTTTTCACCATAA TCTTTTCCACTGCAACTGCGTGCCTTCGCACGTGTAGGCATGTAGGGTAG ATAAATATAGGACCACGCGACACAAACACATCTACCACCAGGTATGTCGC AGGGGACGAGAAACGTATGGTTTATTTTTCTTTTACAAACTCACACTCCC TCTAGGAGGGGGCGGCGAATAATCGTCTAAATAAAGGTTTCACGCACCCG TCTGCGTCGCCACCCCCTCGGCACCAAAAAAGGCACTGGAGTACTGTACA ACAACGTTAATGCTCACGAGAAAAACTTCCACTTCTACATACCACTTCAT TGCGCGCGCTCGCTGTTGTGCCTTCTTCCGCACCTACTCCCTCCGACATG AACGGCCATTGGCCGACAGGTTCACTCGCCCTACATGAATGATCATTGGC TGGCTCATTCAACCACCCTCCGGCATGAATGATCATTGGGTGAATGATTC GTCCGCCCTCCGACTGCAACGACCATATACCGAAACACTTAAAAGTATTA ATAGAAAAACAGGCAATCCTCACGACATCACTTTTCTTGTTGAGACTTCC AACAACGAATAGAAGGACATTTCCGCCGTATGCAGAAACGTGTGAATATG CTCACTTCGTAACGCGGCGGATTATGATTTTCCCTTCAGCGTGGCGACGC CATAAGGCGTGCGGCACCTCCTCCTATGACGCGATCCTCGGAAAGAAGCC GCACCGGGCGCTTCATGCACATAAAACACACACCTTTACGTGCACCCGGC TCTCAAGGGCTGCGCCTTCTTCCGTCCGATCGTTTCAAAGCCGTGATATA TTACTGTACAGCAACTCAAGTCAAGCTCGATGTGACTGTCACCTAAGATA ATTCTCCGCACTCGACACTCGACACAACTCCAGAGAACCTCTCTTTTCTT CACGCTAAAAAACGACCCATGAGACAAATTACGCCGCAAAATTTCCACCA AATATCCCGAGTATTGTTATATCCTCACCAAAGACAATTCATCATCTACT GACGAACGGAATCTCGGGATCGAGCCTGTACACTAGAGCACCTAGAGCAC CCTTTTCGCCGCCGCTCTCCCTCGGCCCCTGAGCGACCTCCTCCCCCGCA AAAAGTTGCATGAAACATTTCAATTCCTAACCAAAATGTAGATCTTATTG CTCCCTTCCAACCTTAGAAGCGCGGGGTCAAGCCGGCGATAAACCCCCAG TCACAACCACCAGCACACATCACATCGACGGGTAAACGCGGTAACGTACA TCTCAAATTCTGTTCACACATTCTTTCTTGTGGCATGCGCCCGGTTCGGG CAGGGCTATGTTCGCGAGGGGGACTAGATCAATGCAACGCGTTTCTGAGT CCCGCATTACTTTCTGACCCACGAGCAATCCGAATCGCTATAACGTGCAC CGCGGAACGCCCTCTTTCGAGAGCCCATCACGTAGACAGAGAGATGACGA ATGACTGCGGTCACCATAATTTTGCACCCAATATCACATAATACCGCACC TTACCACCTTACCACGCAAGCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig826:254977..262898+

>mRNA_F-serratus_M_contig826.19669.1 ID=mRNA_F-serratus_M_contig826.19669.1|Name=mRNA_F-serratus_M_contig826.19669.1|organism=Fucus serratus male|type=CDS|length=4626bp|location=Sequence derived from alignment at F-serratus_M_contig826:254977..262898+ (Fucus serratus male)
ATGCGGGAAAATATTCAGGGTGTGCACGAACAAATTCCGGGAGAGACGCA
CTCATCAGATTTCGCGACGCGCGATCGATTAGATGGAAAACCCAAGCGTC
GTAAGAGAGATGAAAAAATCGAGACAACTCATGCGTCTGAGAGCGACATT
CCGGTCGTGATTACCACCATTGACGACCACTCACCCGCCAATTCCCCTCC
GAAGAGCGTATCGGAGATATTTTCCTACCCTCTGGTGTGTACTAAGTGCA
CTTTTATCAACCGCGTAAGCCAGGCACCTGGACTACCCTTAACCACCGCC
TGTGCGGTGTGTCTTGAGCCCATTCAAATAAGCAACACAACCACTTCTTC
TGCCGGCTACACGATGTCGGAGGTGAGCGTGGGCGAAGTGTTGGGCGAGA
GCATCTCAGCGAAGTGCCCGACCTGCACCGTGATATTGATGGACGGGATA
AATGCTACGGTTTGCTACGTTTGCGGCTCACTTTTGGCATCCTTTAGCCA
ATCCAAGATGACGAAGAATTTGCCGCCGGAGGAGTGGTGGGAGTGCAGTA
CGTGCACGCTTCGAAACGGTCCTAGAACGACCGTTTGCCATGCTTGTGAG
ACCCCGCTGGCCAACGTCGCCATCCCACCCGATGCGGGAAAATATTCAGG
GTGTGCACGAACAAATTCCGGGAGAGACGCACTCATCAGATTTCGCGACG
CGCGATCGATTAGATGGAAAACCCAAGCGTCGTAAGAGAGATGAAAAAAT
CGAGACAACTCATGCGTCTGAGAGCGACATTCCGGTCGTGATTACCACCA
TTGACGACCACTCACCCGCCAATTCCCCTCCGAAGAGCGTATCGGAGATA
TTTTCCTACCCTCTGGTGTGTACTAAGTGCACTTTTATCAACCGCGTAAG
CCAGGCACCTGGACTACCCTTAACCACCGCCTGTGCGGTGTGTCTTGAGC
CCATTCAAATAAGCAACACAACCACTTCTTCTGCCGGCTACACGATGTCG
GAGGTGAGCGTGGGCGAAGTGTTGGGCGAGAGCATCTCAGCGAAGTGCCC
GACCTGCACCGTGATATTGATGGACGGGATAAATGCTACGGTTTGCTACG
TTTGCGGCTCACTTTTGGCATCCTTTAGCCAATCCAAGATGACGAAGAAT
TTGCCGCCGGAGGAGTGGTGGGAGTGCAGTACGTGCACGCTTCGAAACGG
TCCTAGAACGACCGTTTGCCATGCTTGTGAGACCCCGCTGGCCAACGTCG
CCATCCCACCCGACGGCGATCGCGCGAGTACCGGGATCGTGATTCCCACA
GTGGAAGAATTGATATCGAGAACCCAAGCCGAGGCGGGGGACGCCCAGGC
CGCTACGAAGGGTATCATCCCCCGATTACATCAACGTCTCATAGACGAAC
ACGGGGAATGCATGGGGATACCACAAACGGGACGCGGCGGAGGTGGCTTG
GCGTGGCGGTCAAGCAGTCTACACGGGAGAAAAGAGCAGGCAGAATGGAG
TCTGTGCGATTCGCGCACGGCCCACTGTACGCAGCGGGGATTCCAGGGGT
CCGAGTTCTCGTGCGGATACCGAAACATCCAGATGATGTGCTCCGCGCTG
ATGGAATGGCCGGAGTATCGCAGACGGCGATCGCGCGAGTACCGGGATCG
TGATTCCCACAGTGGAAGAATTGATATCGAGAACCCAAGCCGAGGCGGGG
GACGCCCAGGCCGCTACGAAGGGTATCATCCCCCGATTACATCAACGTCT
CATAGACGAACACGGGGAATGCATGGGGATACCACAAACGGGACGCGGCG
GAGGTGGCTTGGCGTGGCGGTCAAGCAGTCTACACGGGAGAAAAGAGCAG
GCAGAATGGAGTCTGTGCGATTCGCGCACGGCCCACTGTACGCAGCGGGG
ATTCCAGGGGTCCGAGTTCTCGTGCGGATACCGAAACATCCAGATGATGT
GCTCCGCGCTGATGGAATGGCCGGAGTATCGCAGAGTGCTCTTCGGGGGC
AGCGGTTTCGTCCCCGGAGTTTTGCTGCTGCAGTGTTGGATAGAACGGGC
GTGGGCAGACGGCTTCGATCCGGAGGGCTGCGAACAGCTTGGCGGGCCCG
GGGCGCTCATGGGAAGCGAGAAATGGATAGGAGCGACAGAGTGCGCCGCA
CTCTTAAGGCAAGCAGGAGTGCTCTTCGGGGGCAGCGGTTTCGTCCCCGG
AGTTTTGCTGCTGCAGTGTTGGATAGAACGGGCGTGGGCAGACGGCTTCG
ATCCGGAGGGCTGCGAACAGCTTGGCGGGCCCGGGGCGCTCATGGGAAGC
GAGAAATGGATAGGAGCGACAGAGTGCGCCGCACTCTTAAGGCAAGCAGG
ATCCTTCGGTGTGAAAGCGGACGTGATTGACTTCGAATCGTCCGCTGCTT
CTCCCGAAATGCCCGAGCAAGTAGGAAAAGAGAACGCTCCCGCCGGTGGT
AACCGCCACTCTCTCTGCGCACCCGAGGGATCCGGACCCCCGCTGATCGC
TCTCCGATGCGATCGCTTGGGGTCCTCCCCCCTCAACCCCATCCAACAGC
AACAGCAACAATCCATGAGGTCGTACCTCGTGTCCCCAGACACTACAGGA
GGAACCGGGAGACACGGTAGCGACAACTGCAAAAAAAAATCCAAGCCCGC
CAGCGGTGGAGGCTTGATTACAGGCGCCGGAGTACGCCTTGACGGCTACA
GAAGACTGGAACCACGGACGGACACCCCTCGTCCCGCTAATTCCAACTGT
TCAGGTGGAGTCGGCAGTGCGACGTGCTCATGGAGAACCAATTCACGTAC
GCTAGGCGGGGGGCGCTGGCGGGGCGAAAGCATAGGCGGGCGAGGCGAGA
GATGGGGCAAGGACACGGGAAGGAAAGCGGGGCAACGAATGGGTAGAGCG
ATCGTAGAGTGGGCGTGGGAGTACTTTTGCACGTCGTGGGGCGACGCGGA
GGTCTTTGGGGACGATGTAGTCGGCGAAAGAGGACTGCCAATGGCGATTG
GAGAACAAACAAAGAAGATAAAGAGCGAAAATCTGCCGGCGACCCAGACT
CGACCCCCGCCCCCGCTCTACTTCCAGCACGACGGACACTCCAGGTCTAT
TGTGGGGGTTCTCTTGCCGGGGGGAGCTGGCCAAGTCGCTGGCCAAGGAA
GCCGAGGAAGGTGTCAGGCCGGAGCGGGTGCAGGTCGGAGCAAAGCAAAC
AGTGCTAGAGGTCGTGCCGCGCGAGGGAGTGGGGGCGGGAAAGGGGGCAT
ACATCGGCGGCGTACGGGGAGTTTACTAGTGTTCGACCCGTCTCAGCACG
GGAGCGACATCAGCAGAGCCCTTGACGGAGAAAGAACGAAACGATCCTGG
AACAGATCCTTCGGTGTGAAAGCGGACGTGATTGACTTCGAATCGTCCGC
TGCTTCTCCCGAAATGCCCGAGCAAGTAGGAAAAGAGAACGCTCCCGCCG
GTGGTAACCGCCACTCTCTCTGCGCACCCGAGGGATCCGGACCCCCGCTG
ATCGCTCTCCGATGCGATCGCTTGGGGTCCTCCCCCCTCAACCCCATCCA
ACAGCAACAGCAACAATCCATGAGGTCGTACCTCGTGTCCCCAGACACTA
CAGGAGGAACCGGGAGACACGGTAGCGACAACTGCAAAAAAAAATCCAAG
CCCGCCAGCGGTGGAGGCTTGATTACAGGCGCCGGAGTACGCCTTGACGG
CTACAGAAGACTGGAACCACGGACGGACACCCCTCGTCCCGCTAATTCCA
ACTGTTCAGGTGGAGTCGGCAGTGCGACGTGCTCATGGAGAACCAATTCA
CGTACGCTAGGCGGGGGGCGCTGGCGGGGCGAAAGCATAGGCGGGCGAGG
CGAGAGATGGGGCAAGGACACGGGAAGGAAAGCGGGGCAACGAATGGGTA
GAGCGATCGTAGAGTGGGCGTGGGAGTACTTTTGCACGTCGTGGGGCGAC
GCGGAGGTCTTTGGGGACGATGTAGTCGGCGAAAGAGGACTGCCAATGGC
GATTGGAGAACAAACAAAGAAGATAAAGAGCGAAAATCTGCCGGCGACCC
AGACTCGACCCCCGCCCCCGCTCTACTTCCAGCACGACGGACACTCCAGG
TCTATTGTGGGGGTTCTCTTGCCGGGGGGAGCTGGCCAAGTCGCTGGCCA
AGGAAGCCGAGGAAGGTGTCAGGCCGGAGCGGGTGCAGGTCGGAGCAAAG
CAAACAGTGCTAGAGGTCGTGCCGCGCGAGGGAGTGGGGGCGGGAAAGGG
GGCATACATCGGCGGCGTACGGGGAGTTTACTAGTGTTCGACCCGTCTCA
GCACGGGAGCGACATCAGCAGAGCCCTTGACGGAGAAAGAACGAAACGAT
CCTGGAACAGTATGTTGAAGCGAGGAGAAAACACTCTGCACAGACGACAG
TTTCAAGTGGTCGCCGTCCGACCAGGGCTAATCGAGGCCGGGAGAGCCAG
CGGCTGGAAGAAATTAGTTTCGTCCAAAATTAGCGTCGAGTGATATGTTG
AAGCGAGGAGAAAACACTCTGCACAGACGACAGTTTCAAGTGGTCGCCGT
CCGACCAGGGCTAATCGAGGCCGGGAGAGCCAGCGGCTGGAAGAAATTAG
TTTCGTCCAAAATTAGCGTCGAGTGA
back to top