mRNA_F-serratus_M_contig826.19668.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig826.19668.1 vs. uniprot
Match: D8LTI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI5_ECTSI) HSP 1 Score: 742 bits (1916), Expect = 5.690e-236 Identity = 568/1433 (39.64%), Postives = 764/1433 (53.31%), Query Frame = 1
Query: 145 STEVSTRPELSQ----HSRRNTSILRPYVKN-LGYSTAGWEESLTV-KFRDLPSHHDRMYALFLGCSHRGDYHGSAVESAARPEPREVEMSRSQVIYFMGKLQETLMHEERTVRGIFEALGRGSKSEVDLRTYIEALEYMAVRTGTAIPTGAAEKGLAFLCQHAETLWPFLQEELIGNDLGGDK-KGGKYGSSENKDLGEKLLPLECTGSGTELSLDYGGSSRAAIGRAPRDMLGKSIMIDCANKM--------------YPLVRVSAALEAFVITFGDDGVAPSDFPLQDLTNFLYLGGQTKPRVFSPQVSLGGLKALVDKYGRWALKRNRRELQSEKVKVAEAARSAKAGKALPLTDQQLDAVVDFLNPNRDGNIDLDELIQAFKKQRTATNYLNRESP---QGSPESSLGGGSGEIEADDSMASPGKGPAPKPRGVEKKGISGVGFEQDRYQIEQEERPLFAPEEAGLLTAYIVESQQAFSLMSVADIQHGISSAKRAAAQTAARGVYRDAAKRFADQLRSAGMAPESDDGWKRWFEMCELGLRADDATGKERLLGRTELKRGLKNIYLL-------------------------SERD------TVDSSA--RNG-WSEVELNDLLMGLVVLQDGDCRGKDSAS------RGEGERTEE---ALDLTENDFRERLIQASTSGGREVDRYLEAGQVVESLVERLELYLKDKAMRVAHLFERMTVWAKNASEHDIT-----KTPHKASWAAGAPTQRGDKSRAPPAALFAILTSLKVDDLTGMEKLRMKSEQRRIAKG----KANKYVYMQAARQVVEVEESGASAVLELLRTRATSNSTKLIELFNAMGTSKDGLLSREELREGLQLIAEGLTDDRSWLDQLREDCRERKHAAAETERAKAEKRAAARLRARITAMESSGAARVLRRINEHLV-------DVFHSLSLRGYTDFTPVELEMALNLVDGLDLTRREVRRAVRFLDRDRNGTIDVRKVEEAVRDFRELSRDHPFLGMGPMTVIEPSELRRLAEKSFTDVLMASSRGRRDLLERAEGSGDGGSAVINRDEGKAFTSGTATVSVSEIVEAFEEAFRQSGAGNGGEGE-SVGDVGSPAIRQQLSVEVKRTQVYLDEVVRWLRSSKTFSRAPTGRMPTFVERMTERQKMELELQKKLQEKRRRAAGQRHWKQWVARTAQRRKQ--------EDRYASGSPAD--WEGCSGREDGGARGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTAAGSSELLHLVNLKLREARAASRGRL-PRIDNPPDSDFSLSGLQPRNLATSGFMCSTRGSVTRESKRGKVPPRADYKALDLAAARVAVSPYRVRPDEPYQSQKHLAGCEVLSRMSRTPSRRQFPKALVQEGRHATSALFAKGSTSMFSMDPSLAR 4158
ST ++ EL++ + RRNT ++R Y ++ LG++TA +ESLTV KFRDLPS R+Y L +G R D + S + + ++ MS+ + M +L E L H+ RTV G+F ALG +S V+ Y LE+MAVR GTAIPTGAAE+ LA L + E WPFL ++L D K K ++ K+ P E S + S + S R G A + + + L R+SAALEAF D G +QDL FLYLGG + Q++L L+A+V KYGRWA++R RRE + +K K+ EA ++ + ++ VD + + +RE+ QG P+ + +EE PLF+ +EA + A+++ESQQAFSL++VADIQ GI +AKRA AQ A+R VYR AA+RFA +L AGMA +SDDGW+RWF+MCELGLRA A G +RL+GRTEL+RGLK + E D T DSS R G WSE +++DLL G+ +L G G D RG G ++ A D T+ +FRE L+ A T G DR + V L ERL+ YLKD +R+ FER+ WA+ ASE D+ + P + AA QRGD S PAAL A+L SL LTG E+ ++K+++ K KA + V +AA++V+E E+SGAS +L+L+R S S ++IELFN M TSKDGL+SREELREGL +IAEG + ++Q+RE CR R+ +AA E E R A +LRARI A ++SGAA+VLRRI+EHLV D+F S SLRG+ T ELEMAL+LVDGL+LTRREVR VRFLD+D +GTIDV +++EAVR+FREL+ D P LG GPMTVI+ +E+ RLA ++F D++ K ATV VS++ AFEEAFRQ A GEG+ S+ + P I QQ S + + Q +D+V+ WLR+S+TF RAPTGR+PT E+MTERQKME+ELQ KLQEKRRRAAGQ+HW++WV+R A+R K DR G A E + XXXXXXXXXXXXXX + +G + L +N KLR AR A+ RL PR+ D S +Q + ++ + KR + +A+ KALDLA RVAVSPYRV + YQ KH+ G ++++RM+R S+ FPKALV+EG ATS L GS M +D A+
Sbjct: 31 STSCTSATELTRQKHPYGRRNT-LVRSYTRHGLGFATADRDESLTVTKFRDLPSRERRLYTLTMGYGLRAD-NKSGFSGDCKRQRQQSGMSKGHAVALMARLHEMLRHDGRTVEGVFSALGV-DESRVNKEQYASGLEHMAVRAGTAIPTGAAEQSLASLYRQREEAWPFLAQQLTNADAEDSKEKDTPNNGTQLKEEAGATKPDEVVTSQSVESANV-NSQRGEFGGAQVEQXXXXXXXXXXXRKRNSTVAGGEGDGETFSLARLSAALEAFARARDDRGYPLDGLAIQDLVAFLYLGGHAR------QMTLAELQAIVMKYGRWAIERARREAKGQKAKLVEATKNGNNNATDAVEEEN---AVDGESGDXXXXXXXXXXXXXXXXXXXXXKQADRETAAALQGQPQ-------------------------------------------QEDSSREEMPLFSLQEAEFMIAFLMESQQAFSLINVADIQRGIRAAKRAEAQAASREVYRRAAERFAAELLGAGMALDSDDGWERWFDMCELGLRAG-AAGNKRLVGRTELRRGLKALSAAPKVPEVPPPLPVEAVEGETNSGNGDKEGDRQGRGATADSSEQRRGGTWSEQDIDDLLGGVTILGGGGSGGFDGGEDANGTGRGGGIAGKDGTAAADFTDVEFREHLLLAITEGAVRADRDMAVADKVLPLTERLQAYLKDHGIRLGQFFERVVAWARQASEEDLIMQWTDRVPPPGAGAAAGAAQRGDDSCVAPAALKAVLVSLTTGGLTGAERAKLKADELSAVKEEQERKAAEGVSAEAAKRVLEAEKSGASVILDLIRASVASKSIRVIELFNTMDTSKDGLISREELREGLAMIAEGHLGQSASMEQMREVCRNRRRSAAIRENQDKELRRALKLRARIAAAQASGAAKVLRRIHEHLVQTRHKVVDMFRSFSLRGHLSLTTAELEMALSLVDGLELTRREVRSVVRFLDKDSSGTIDVAEIDEAVREFRELTLDMPSLGTGPMTVIDAAEIGRLARRTFDDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG--EHQATVRVSDVSAAFEEAFRQFKAD--GEGQHSIAAMRHPGI-QQPSTDTQHAQACVDKVMEWLRNSRTFDRAPTGRVPTLAEQMTERQKMEVELQNKLQEKRRRAAGQKHWEEWVSRKARRSKSGAAVNGDDNDRQRGGVDAGIGGESAAXXXXXXXXXXXXXXXXXXXXXXXXXQDEAFAAWAREKDKVLRARKREKRREMTSGGLDTLEAINKKLRGARCATPSRLLPRLGCRSDGGSLTSVVQTSGEGGGSRLGMSKDVGSIRGKRRRPATKAERKALDLAVTRVAVSPYRVPAKDKYQHSKHIEGGKIVTRMARNQSK-PFPKALVEEGWQATSQLL--GSAGMSLIDHPTAK 1398
BLAST of mRNA_F-serratus_M_contig826.19668.1 vs. uniprot
Match: A0A7S2C0N4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0N4_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.780e-8 Identity = 62/207 (29.95%), Postives = 104/207 (50.24%), Query Frame = 1
Query: 2317 IAKGKANKYVYMQAARQVVEVEESGASAVLELLRTRATSNSTKLIELFNAMGTSKDGLLSREELREGLQLIAEGLTDDRSWLDQLREDCRERKHAAAETERAKAEKRAAARLRARITAMESSGAARVLRRINEHL-------VDVFHSLSLRGYTDFTPVELEMALNLVDGLDLTRREVRRAVRFLDRDRNGTIDVRKVEEAVRDFR 2916
+A+ K + + + AAR VV E G SAVL L +R ++ ++F M S DG +S EL + LQ + + R+ + ++R++ +E K AA A A K A A + ++ E+ GA + H+ VD+F + G E+ + LV GL ++R V+ + F+D+D NG +D +++E A+R FR
Sbjct: 116 LAEYKRGEELSIMAARHVVAFETRGVSAVLRKLDSRIKERGLRVSDIFVEMDASGDGSISGSELGQMLQTLMLPPPEVRAAM-KIRKEKQEAKEAA----HANALKEARAIIE-KLNEAEACGANVCIGAFENHMRQNQARCVDLFRLIDQSGDDQCDLDEMCAVMKLV-GLSVSREAVKAMIDFIDKDGNGVLDAKELENAIRQFR 315 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig826.19668.1 >prot_F-serratus_M_contig826.19668.1 ID=prot_F-serratus_M_contig826.19668.1|Name=mRNA_F-serratus_M_contig826.19668.1|organism=Fucus serratus male|type=polypeptide|length=1554bp GNAFIYVERCRRYFSEVVFGGAASAPSTQILIKLSYLALSIYSIGVIMSTback to top mRNA from alignment at F-serratus_M_contig826:241072..254725- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig826.19668.1 ID=mRNA_F-serratus_M_contig826.19668.1|Name=mRNA_F-serratus_M_contig826.19668.1|organism=Fucus serratus male|type=mRNA|length=13654bp|location=Sequence derived from alignment at F-serratus_M_contig826:241072..254725- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig826:241072..254725- >mRNA_F-serratus_M_contig826.19668.1 ID=mRNA_F-serratus_M_contig826.19668.1|Name=mRNA_F-serratus_M_contig826.19668.1|organism=Fucus serratus male|type=CDS|length=9324bp|location=Sequence derived from alignment at F-serratus_M_contig826:241072..254725- (Fucus serratus male)back to top |