mRNA_F-serratus_M_contig822.19620.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI) HSP 1 Score: 130 bits (328), Expect = 4.470e-33 Identity = 75/148 (50.68%), Postives = 98/148 (66.22%), Query Frame = 2
Query: 248 VSGLVEAGTRTTVLVKANAFDGRTSGVG-CAPIGCVAVNTRDSSLS--SRWSCKGDLLDGESCEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESSGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
++ LV+A RTTV ANA+D RTS G C P GC A TRD S SRWSC L D + C+IT+ FEEPQDIVR+ I FYKG ER R L+++ + I SSGT+ E +D++ D+ + L++ +L LD +EWISITEV+FMV
Sbjct: 1 MTALVDARKRTTVNKWANAYDDRTSEYGGCDPDGCKASLTRDQSWQDESRWSCSEKLEDAQ-CKITYKFEEPQDIVRIKIKFYKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEVRFMV 147
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.190e-24 Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 2
Query: 260 VEAGTRTTVLVKANAFD---GRTSG-VGCAPIGCVAVNTRDS----SLSSRWSCKGDLL-DGESCEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIES-SGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
VEAG++TTV V A A+D G ++G VGC +GC+ D SRWSC +++ DG CEI+F F+ PQDI + +AF+KG ERTR L++++NG E ES G+T +F + + V T+T+ S+G+D ++WIS+ EV+FMV
Sbjct: 252 VEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFMV 400
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 110 bits (276), Expect = 1.450e-24 Identity = 68/152 (44.74%), Postives = 85/152 (55.92%), Query Frame = 2
Query: 248 VSGLVEAGTRTTVLVKANAFDGRTSGVGCAPIG---CVAVNTRD---SSLSSRWSCKGDLLDGES-CEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESSGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
V G VE GT+T V V + A D R GC +G C A NTRD S + SRWSC L+D E C+I F F EPQ IV + +AF+KG ERTR LE+ +NG M+ ES + A DV T+ L S+ L +EWIS+ EV V
Sbjct: 85 VDGAVEVGTKTEVGVSSTAHDVRPGDDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADAT-FNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 235
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 110 bits (276), Expect = 6.400e-23 Identity = 68/152 (44.74%), Postives = 85/152 (55.92%), Query Frame = 2
Query: 248 VSGLVEAGTRTTVLVKANAFDGRTSGVGCAPIG---CVAVNTRD---SSLSSRWSCKGDLLDGES-CEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESSGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
V G VE GT+T V V + A D R GC +G C A NTRD S + SRWSC L+D E C+I F F EPQ IV + +AF+KG ERTR LE+ +NG M+ ES + A DV T+ L S+ L +EWIS+ EV V
Sbjct: 336 VDGAVEVGTKTEVGVSSTAHDVRPGDDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADAT-FNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 486
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 108 bits (270), Expect = 7.680e-23 Identity = 67/151 (44.37%), Postives = 89/151 (58.94%), Query Frame = 2
Query: 257 LVEAGTRTTVLVKANAFD---GRTSGV-GCAPIGCVAVNTRDS---SLSSRWSCKGDLL-DGESCEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESS-GTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
LV A T T + A FD G+ SG GC GC+ V D + SRWSC D++ DG CEI F F PQ++ ++ + F+KG ERTR L++++NG E +S G+ FD+ A DV T+TL SLGLD +EWIS+ EV FMV
Sbjct: 191 LVNAATITAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSY--FDVIAYDVHTVTLESLGLDTDEWISLLEVIFMV 339
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 106 bits (265), Expect = 2.090e-22 Identity = 72/161 (44.72%), Postives = 92/161 (57.14%), Query Frame = 2
Query: 233 PTPTPVSGLVEAGTRTTVLVKANAFD---GRTSG-VGCAPIG---CVAVNTRD---SSLSSRWSCKGDLLDGES-CEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESSGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
P PT V VE GT+T V V A A D GR+SG VGC G C A N RD + + SRWSC LLD E C+I F+F EPQ+IV + +AF+KG ER R LE+ VNG ++ ES + + A++ T+ L S+ L NEWIS+ EV V
Sbjct: 146 PLPT-VDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADST-FNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFV 304
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 107 bits (268), Expect = 8.680e-22 Identity = 69/156 (44.23%), Postives = 88/156 (56.41%), Query Frame = 2
Query: 248 VSGLVEAGTRTTVLVKANAFD---GRTSG-VGCAPIG---CVAVNTRD---SSLSSRWSCKGDLLDGES-CEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESSGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
V G VE GT+T V V + A D G +SG GC +G C A NTRD S + SRWSC L+D E C+I F F EPQ I+ + +AF+KG ERTR LE+ +NG M+ ES + A DV T+ L S+ L +EWIS+ EV V
Sbjct: 359 VDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADAT-FNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 513
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 100 bits (250), Expect = 1.400e-21 Identity = 67/156 (42.95%), Postives = 86/156 (55.13%), Query Frame = 2
Query: 248 VSGLVEAGTRTTVLVKANAFD---GRTSG-VGCAPIG---CVAVNTRD---SSLSSRWSCKGDLLDGES-CEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESSGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
V G VE GT+ V V A A D G +SG VGC +G C A NTRD S + SRWSC L+ E C+I F F EPQ IV + +AF+KG +RTR L + VNG ++ ES T + A++ T+ L S L +EWIS+ EV V
Sbjct: 17 VDGAVEVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESY-TDSTFNTLGVTANEASTVMLESTALLSDEWISLIEVLIFV 171
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 1.640e-20 Identity = 52/122 (42.62%), Postives = 78/122 (63.93%), Query Frame = 2
Query: 326 VGCAP-IGCVAVNTRDSSLSSRWSCKGDLL-DGESCEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIES-SGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQFMV 682
+GC P + V D+ SRWSC +++ DG CEITF F+ PQDI + +AF+KG ERTR L++++NG E ES G+T +F + + V T+ + S+G+D ++WIS+ EV+FMV
Sbjct: 1 MGCLPDLAHDGVGEEDT--ESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVAMESVGIDADDWISLLEVRFMV 118
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE) HSP 1 Score: 103 bits (258), Expect = 3.740e-20 Identity = 66/142 (46.48%), Postives = 83/142 (58.45%), Query Frame = 2
Query: 257 LVEAGTRTTVLVKANAFDGRTSGVG-CAPIGCVAVNTRDSSLS--SRWSCKGDLLDGESCEITFNFEEPQDIVRMDIAFYKGTERTRLLEIEVNGSMSSEIESSGTTEGLENFDLDADDVETLTLRSLGLDGNEWISITEVQ 673
LV+A RT V ANA+D RTS G C P GC A TRD S SRWSC L D + C IT+NFEEPQDIVR I++NG I SSGT+ E +D++ D+ + L++ +L LD +EWISITEV+
Sbjct: 608 LVDARKRTAVKKWANAYDDRTSEYGGCDPDGCKASFTRDRSWKDESRWSCSEKLEDAQ-CNITYNFEEPQDIVR----------------IKINGEFKKIITSSGTSSTYETWDINTDETKWLSMEALNLDDDEWISITEVR 732 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig822.19620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig822.19620.1 >prot_F-serratus_M_contig822.19620.1 ID=prot_F-serratus_M_contig822.19620.1|Name=mRNA_F-serratus_M_contig822.19620.1|organism=Fucus serratus male|type=polypeptide|length=177bp MRIRASGVFCEDSGTAPCIITRDPSPTPTPVSGLVEAGTRTTVLVKANAFback to top mRNA from alignment at F-serratus_M_contig822:9617..11189- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig822.19620.1 ID=mRNA_F-serratus_M_contig822.19620.1|Name=mRNA_F-serratus_M_contig822.19620.1|organism=Fucus serratus male|type=mRNA|length=1573bp|location=Sequence derived from alignment at F-serratus_M_contig822:9617..11189- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig822:9617..11189- >mRNA_F-serratus_M_contig822.19620.1 ID=mRNA_F-serratus_M_contig822.19620.1|Name=mRNA_F-serratus_M_contig822.19620.1|organism=Fucus serratus male|type=CDS|length=1062bp|location=Sequence derived from alignment at F-serratus_M_contig822:9617..11189- (Fucus serratus male)back to top |