mRNA_F-serratus_M_contig8177.19579.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8177.19579.1
Unique NamemRNA_F-serratus_M_contig8177.19579.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A4Y9ZBF0_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9ZBF0_9AGAM)

HSP 1 Score: 245 bits (626), Expect = 1.330e-68
Identity = 140/346 (40.46%), Postives = 199/346 (57.51%), Query Frame = 1
Query:   40 KTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAS-LSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKL-SAWVDADHASCPDTRRSVSG 1068
            +T LG++ VFK K   DG +E++K R V +GF Q  G  Y E+ +PTP  S++R  LA+ A  D E   +DI  AFL  D+ EE+YV  P+G+ +  P  V RL K++YGL  AG  W KK    L A GF R + +  ++  +    V +II V++DD+ + S+++    +  +DLR+ F  +DLG  S+ LG  ITRDR  RT++  Q++Y   + ERFG+ +   +  P    + L+ A   K   E AEMH  PYR AVG L ++A  TR D+A++   LA+FG NPG EHWKA+   L+YLK T    +TY        L +A+ DADH    D  RS SG
Sbjct:  710 RTALGSRWVFKVKHKSDGSIERHKARLVVQGFSQRPGFDYTETFAPTPRWSALRAVLALAAIEDLELESIDISSAFLNGDLEEEIYVRQPEGFTEKGPEWVWRLLKSLYGLKQAGRCWHKKLNEVLEALGFHRIKCEHSIWVYQR-DDVRIIIPVFIDDMTIASKSQAAIQKVKDDLRAHFKFRDLGPTSWLLGVEITRDRSTRTLSLSQRQYTLDLLERFGMSQCDTVATPLNPGTRLTSAMSPKTQEESAEMHDKPYRAAVGALQYLATATRCDIAHSVGVLARFGHNPGIEHWKALKHLLRYLKGTLDYKLTYHPDPSGSHLFTAFCDADHGGDLDNGRSTSG 1054          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 233 bits (594), Expect = 2.410e-68
Identity = 129/345 (37.39%), Postives = 197/345 (57.10%), Query Frame = 1
Query:   40 KTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1068
            K  +G K VF+ K   +G V K+K R VAKG+ Q  GI + ++ +P   + SI  +LA  A+ D E   +D++ AFL  DV EELY++ PDG+ D  N   +  L++A+YG   A   W+ K    L  +GF RS ADPCV+ R+   +   I+V+YVDDL++ S+TK+        L+  F IK+LGE+ Y LG  I R+R+ +T+  +Q+ Y + + E+FG+ K   +  P    +      ++ +A +A+    PYRE VG LM++A  TRPD+A     +AKF +     HW A  + L+YLK T  +G+ + GA +   +  + DA+ A   DTRRS +G
Sbjct:   23 KKAIGFKWVFRIKRDPNGNVVKFKARLVAKGYTQRPGIDFTDTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYS-IVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPAD-CNSKLVKMTEEEAFVAKY---PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKGEPIG-YADANWAGDLDTRRSTTG 361          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 244 bits (623), Expect = 2.890e-68
Identity = 130/351 (37.04%), Postives = 205/351 (58.40%), Query Frame = 1
Query:   34 QRKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGSKNDAEIA--EMHGIP-YREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK--RTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSG 1068
            + + ++G++ VF +K  + G+V +YK R VA+GF QI G+ Y ++ SP     ++R  +A+ A  DWE RQ+DI+ A+L  ++ EE+++E P+G+ D   +V RL+  +YGL  AG +W+KK   +L   GF R+ ADPCV+     GK+  I+ V+VDD+++  +++      +  L+  F +KDLGE    LG  I R+RK +T+T  Q+ Y  T+ ERF   K + IP+P       R    K D EI   E H +  Y+  +G +M+ +  T P LAY   TL++F  NPG EH  A+ +  +YL   R   +G+ YGG  +  + +  + DAD AS P+ R+S+SG
Sbjct:  894 EERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPNVTLR----KRDDEITPPEKHLVKEYQTKLGSIMYASIGTMPQLAYAVQTLSQFSSNPGAEHMSALKRVFKYLAHARDHEVGIVYGGTRQWPVDIIGYTDADWASNPNDRKSISG 1239          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 233 bits (593), Expect = 4.750e-68
Identity = 127/342 (37.13%), Postives = 198/342 (57.89%), Query Frame = 1
Query:   46 VLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1068
            V+ TK VF +K  + G + ++K R VA GF Q+ G+ + E+ +   +  SIR+ L+V     +   QLD++ AFL AD+ E++Y+E P+G +   ++V +L KA+YGL  AG  W K   G LI  GF+   +D C++  +  G     I +YVDD+++   T+       + + + F IK+LG + + LG  I  DR  R ++ +Q  Y +T+ ERF  +    +  P  ++  LS+ADG ++D + AEM   PYR  +G L +VA  TRPD+A+    L++F +NPGP HW A ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG
Sbjct:   37 VIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSG 377          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A4Q3DG62_9RICK (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DG62_9RICK)

HSP 1 Score: 235 bits (600), Expect = 1.050e-67
Identity = 130/345 (37.68%), Postives = 201/345 (58.26%), Query Frame = 1
Query:   49 LGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTS--VIPVPTGKASLSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGA 1071
            +G K ++KRK G DG+VE +K R VAKGF Q +GI Y E+ SP     SIR+ LA+ A  D+E  Q+D++ AFL   + EE+Y+  PDG+  +   ++V +L K++YGL  A   W+++F   +   GFE++ ++PCV+  K+  KVVV +V+YVDD+L++    +      E L   F +KDLG  ++ LG  I RDRK + +   Q  Y   V  RF ++     ++P+ +GK  LS+    K   E+ +M  +PY  AVG LM+    TRPD+ Y    ++++  NPG EHW AV   L+YLKRT  + + Y   + D+ +  + D+D  +  D  +S SG+
Sbjct:  177 IGCKWIYKRKKGADGQVETFKARLVAKGFTQREGIDYDETFSPVAMFKSIRILLAIAAHYDYEIWQMDVKTAFLNGYLEEEIYMAQPDGFIEKGQEHKVCKLLKSIYGLKQASRSWNQRFDEVIKTYGFEQNLSEPCVY--KYSKKVVVFLVLYVDDILLIGSDIKVMSDIKEWLAKQFQMKDLGNAAFVLGIQIIRDRKNKLLALSQGTYIDKVLSRFSMQNAHGVLLPIRSGKF-LSKEQCPKTPQEVEDMSRVPYASAVGSLMYAMLCTRPDICYAVGVVSRYQSNPGQEHWIAVKHILKYLKRTRDMMLVY--TSNDLVIQGYTDSDFQADRDMLKSTSGS 516          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 240 bits (612), Expect = 5.970e-67
Identity = 135/345 (39.13%), Postives = 200/345 (57.97%), Query Frame = 1
Query:   40 KTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1068
            K  L  K VFK K     +V KYK R V KGF+Q KGI + E  SP    +SIR+ L ++A ++ E  Q+D++ AFL   + EE+Y+E P+G+  S  N V +L+K++YGL  A   W KKF   + ++G++++ AD CV+ +K      V +++YVDD+L++ +  +  ++  ++L  SF +KDLG     LG  ITRDRK R +   Q++Y + V  RF +     + +P      LS+     +  EI EM  +PY  AVG LM+    TRPD+A+    +++F  NPG EHW+AV   L+YLK T  L + YGGA  D  L  + DAD A   D+R+S SG
Sbjct:  687 KKALKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSG 1029          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 238 bits (608), Expect = 1.530e-66
Identity = 137/346 (39.60%), Postives = 199/346 (57.51%), Query Frame = 1
Query:   46 VLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGK----ASLSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 1068
            V+  K VFK K G DG +EKYK R VAKGF Q++G+ + E+ +P    +S+R  LA+ A+LD E  Q+D++ AFL  D+ EE+Y+++P G+R S + + +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG  I RDR  R +   Q +Y +    + G+     +  P  +      LS A          E+   PY+ A+G LM+    TRPDLA+T   L++    PG EHW A+M+  +YL+ TA   + Y G T++ K L  +VDAD A+  + RRSV+G
Sbjct:  646 VIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEA----------EIDPKPYQSALGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPLLRYVDADWAANVNNRRSVTG 980          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY)

HSP 1 Score: 235 bits (599), Expect = 1.890e-66
Identity = 130/343 (37.90%), Postives = 197/343 (57.43%), Query Frame = 1
Query:   49 LGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAS-LSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1068
            +G K VFK K    G++E+YK R VAKGF Q +G+ Y+E+ SP  ++ S R+ +A++A  D E  Q+D++ AFL  D+TE++Y+  PDG++ S  +  V +L+K++YGL  A   W  KF   + + GF+ +  D C++  K  G  ++ +V+YVDD+L+ S            L  +F +KDLGE S+ LG  I RDR    +   Q+ Y   V ERF +   +    P  K   LS+    +ND E  EM  IPY  AVG LM+    TRPD+A+    L +F  +PG +HW+A  K L+YL+RT    +TY   ++ +++  + DAD+A C D  +S SG
Sbjct:  322 IGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTYR-RSDLLEVVGYADADYAGCADDLKSTSG 662          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 228 bits (580), Expect = 1.960e-66
Identity = 123/341 (36.07%), Postives = 196/341 (57.48%), Query Frame = 1
Query:   49 LGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSA-WVDADHASCPDTRRSVSG 1068
            +G K VF +K  +DG + +YK R VA+G+ QI G+ Y E+ +P     S+  AL + A  D E  Q+D++ A+L  ++ EE+Y+  P+GY D   +V RL+K +YGL  +G  W+ +F  +L + GF + +AD CV++R   G++  II V+VDDLL+ SET +D      +L + F +KDLGE    +G  I RDR+  T++  Q++Y + V  RFG++    +        + +       A+ A + G  Y+  +G L++ A  TRPD+++    L +F  NPGPEHW A+ +  +YL  T +L + +    E   +S  + DA  AS PD R+S+SG
Sbjct:   16 IGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNVILKKRTDDLIADPAMVGG--YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISG 353          
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 237 bits (604), Expect = 1.090e-65
Identity = 137/346 (39.60%), Postives = 199/346 (57.51%), Query Frame = 1
Query:   46 VLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGK----ASLSRADGSKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 1068
            V+  K VFK K G DG +EKYK R VAKGF Q++G+ + E+ +P    +S+R  LA+ A+LD E  Q+D++ AFL  D+ EE+Y+++P G+  S + V +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG  ITRDR  R +   Q +Y +    + G+     +  P  +      LS A          E+   PY+  +G LM+    TRPDLA+T   L++    PG EHW A+M+A +YL+ TA   + Y G T++ + L  +VDAD A+  + RRSV+G
Sbjct:  969 VIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQNQKLVKLSEA----------EIDPKPYQSVLGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRAYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANVNDRRSVTG 1303          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8177.19579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9ZBF0_9AGAM1.330e-6840.46Uncharacterized protein n=1 Tax=Dentipellis fragil... [more]
H3G9E3_PHYRM2.410e-6837.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM2.890e-6837.04Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A8K1CTN1_PYTOL4.750e-6837.13Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A4Q3DG62_9RICK1.050e-6737.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001F00A0485.970e-6739.13DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A401H123_9APHY1.530e-6639.60Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9GV19_FAGSY1.890e-6637.90Integrase catalytic domain-containing protein n=6 ... [more]
A0A284R853_ARMOS1.960e-6636.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401G4V0_9APHY1.090e-6539.60Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8177contigF-serratus_M_contig8177:5034..6229 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score199.1
Seed ortholog evalue2.8e-48
Seed eggNOG ortholog164328.Phyra71619
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHW0@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1196
Cds size876
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8177.19579.1prot_F-serratus_M_contig8177.19579.1Fucus serratus malepolypeptideF-serratus_M_contig8177 5153..6028 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932434.562798-UTR-F-serratus_M_contig8177:5033..51521622932434.562798-UTR-F-serratus_M_contig8177:5033..5152Fucus serratus maleUTRF-serratus_M_contig8177 5034..5152 -
1690964307.4109893-UTR-F-serratus_M_contig8177:5033..51521690964307.4109893-UTR-F-serratus_M_contig8177:5033..5152Fucus serratus maleUTRF-serratus_M_contig8177 5034..5152 -
1622932434.6037004-UTR-F-serratus_M_contig8177:6028..62291622932434.6037004-UTR-F-serratus_M_contig8177:6028..6229Fucus serratus maleUTRF-serratus_M_contig8177 6029..6229 -
1690964307.437561-UTR-F-serratus_M_contig8177:6028..62291690964307.437561-UTR-F-serratus_M_contig8177:6028..6229Fucus serratus maleUTRF-serratus_M_contig8177 6029..6229 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932434.5819237-CDS-F-serratus_M_contig8177:5152..60281622932434.5819237-CDS-F-serratus_M_contig8177:5152..6028Fucus serratus maleCDSF-serratus_M_contig8177 5153..6028 -
1690964307.4249759-CDS-F-serratus_M_contig8177:5152..60281690964307.4249759-CDS-F-serratus_M_contig8177:5152..6028Fucus serratus maleCDSF-serratus_M_contig8177 5153..6028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8177.19579.1

>prot_F-serratus_M_contig8177.19579.1 ID=prot_F-serratus_M_contig8177.19579.1|Name=mRNA_F-serratus_M_contig8177.19579.1|organism=Fucus serratus male|type=polypeptide|length=292bp
MALAVMAQLDWEGRQLDIEMAFLEADVTEELYVELPDGYRDSPNQVGRLQ
KAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVV
YVDDLLMLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKART
VTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGSKNDAEIAEMHG
IPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYL
KRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGAR*
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mRNA from alignment at F-serratus_M_contig8177:5034..6229-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8177.19579.1 ID=mRNA_F-serratus_M_contig8177.19579.1|Name=mRNA_F-serratus_M_contig8177.19579.1|organism=Fucus serratus male|type=mRNA|length=1196bp|location=Sequence derived from alignment at F-serratus_M_contig8177:5034..6229- (Fucus serratus male)
TGCGCGTGGTGTGTGGAAGGTCGTCGATCGACCCAAAGGAAAACCGTACT CGGCACCAAGACCGTTTTTAAACGGAAGGTCGGCCAGGATGGCCGTGTAG AAAAATACAAGTGCCGCTTCGTGGCCAAGGGTTTCCGCCAGATCAAGGGG ATTCATTACCAAGAGTCATCGTCGCCGACACCTACACAGTCGAGCATCCG GATGGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCTTG ACATAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTATACGTT GAGCTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTGCA GAAGGCCATGTACGGCCTGATGCACGCCGGACTACTGTGGTCGAAGAAGT TCGGCGGAGAGTTGATAGCGAAGGGGTTCGAGAGGTCCCAAGCCGATCCC TGCGTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATTGTGGT CTACGTTGACGATCTACTGATGCTGAGCGAAACGAAGCAGGACGAGCATC GGGCGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGGAG ATCTCGTACTACCTGGGATGTCACATTACTCGGGACCGCAAGGCCAGGAC GGTGACGTTCGATCAGCAGCGTTACGCGCAGACAGTAACCGAGCGATTCG GAATTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGGAAAGCGTCACTT TCGAGGGCAGACGGGTCGAAAAACGACGCTGAGATCGCAGAGATGCATGG CATCCCGTATCGCGAGGCAGTGGGGGTACTAATGTGGGTAGCCAACATGA CTCGGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGTTCGGTGAC AACCCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCT GAAACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACA TGAAGCTATCGGCATGGGTGGACGCCGATCACGCATCATGTCCTGATACG CGTCGTTCGGTATCGGGGGCGCGGTGATGCTCGGTGGAGGAGCAATCAGT TGGTTTTCGCGGGCGCAGAGAATAACCGCGACAGCGACGTCCGAATCGGA GTACGTAGTACTGGCGGAGATTGTGAATGAGCTACGTTTTCTTCGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig8177:5034..6229-

>mRNA_F-serratus_M_contig8177.19579.1 ID=mRNA_F-serratus_M_contig8177.19579.1|Name=mRNA_F-serratus_M_contig8177.19579.1|organism=Fucus serratus male|type=CDS|length=1752bp|location=Sequence derived from alignment at F-serratus_M_contig8177:5034..6229- (Fucus serratus male)
ATGGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCTTGA
CATAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTATACGTTG
AGCTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTGCAG
AAGGCCATGTACGGCCTGATGCACGCCGGACTACTGTGGTCGAAGAAGTT
CGGCGGAGAGTTGATAGCGAAGGGGTTCGAGAGGTCCCAAGCCGATCCCT
GCGTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATTGTGGTC
TACGTTGACGATCTACTGATGCTGAGCGAAACGAAGCAGGACGAGCATCG
GGCGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGGAGA
TCTCGTACTACCTGGGATGTCACATTACTCGGGACCGCAAGGCCAGGACG
GTGACGTTCGATCAGCAGCGTTACGCGCAGACAGTAACCGAGCGATTCGG
AATTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGGAAAGCGTCACTTT
CGAGGGCAGACGGGTCGAAAAACGACGCTGAGATCGCAGAGATGCATGGC
ATCCCGTATCGCGAGGCAGTGGGGGTACTAATGTGGGTAGCCAACATGAC
TCGGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGTTCGGTGACA
ACCCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTG
AAACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACAT
GAAGCTATCGGCATGGGTGGACGCCGATCACGCATCATGTCCTGATACGC
GTCGTTCGGTATCGGGGGCGCGGTGAATGGCGCTGGCGGTGATGGCCCAG
TTGGACTGGGAGGGGCGGCAGCTTGACATAGAAATGGCGTTTCTCGAGGC
GGATGTTACGGAGGAGCTATACGTTGAGCTCCCCGATGGGTATCGCGACT
CGCCGAATCAGGTTGGACGACTGCAGAAGGCCATGTACGGCCTGATGCAC
GCCGGACTACTGTGGTCGAAGAAGTTCGGCGGAGAGTTGATAGCGAAGGG
GTTCGAGAGGTCCCAAGCCGATCCCTGCGTGTTCCGGCGGAAGCATCTAG
GGAAGGTCGTCGTCATCATTGTGGTCTACGTTGACGATCTACTGATGCTG
AGCGAAACGAAGCAGGACGAGCATCGGGCGATGGAAGACCTTCGATCCAG
CTTCCCCATCAAGGATCTAGGGGAGATCTCGTACTACCTGGGATGTCACA
TTACTCGGGACCGCAAGGCCAGGACGGTGACGTTCGATCAGCAGCGTTAC
GCGCAGACAGTAACCGAGCGATTCGGAATTCGGAAGACCAGCGTGATCCC
TGTTCCTACGGGGAAAGCGTCACTTTCGAGGGCAGACGGGTCGAAAAACG
ACGCTGAGATCGCAGAGATGCATGGCATCCCGTATCGCGAGGCAGTGGGG
GTACTAATGTGGGTAGCCAACATGACTCGGCCTGACCTAGCTTATACCGC
GCACACGCTCGCCAAGTTCGGTGACAACCCCGGGCCCGAGCACTGGAAGG
CAGTAATGAAAGCGCTACAGTACCTGAAACGAACGGCGAGCCTAGGGGTA
ACATATGGAGGCGCGACGGAGGACATGAAGCTATCGGCATGGGTGGACGC
CGATCACGCATCATGTCCTGATACGCGTCGTTCGGTATCGGGGGCGCGGT
GA
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