mRNA_F-serratus_M_contig815.19572.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig815.19572.1
Unique NamemRNA_F-serratus_M_contig815.19572.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 218 bits (556), Expect = 7.190e-60
Identity = 131/381 (34.38%), Postives = 196/381 (51.44%), Query Frame = 1
Query:    1 DKPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGLR-------------------------------------------------------------ALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 957
            D+P T  EA    +  +W+ A   E+   +   ++  V+RP+ + V+  K +FK K G DG +EKYK R VAKGF Q++G+ + E+ +P    +S+R  LA+ A+LD E  Q+DV+ AFL  D+ EE+Y+++P G+R S + + +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG+                                                              +LM+    TRPDLA+T   L++    PG EHW A+M+  +YL+ TA   + Y G T++ K L  +VDAD A+  + RRSV+G
Sbjct:  601 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEAEIDPKPYQSALGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPLLRYVDADWAANVNNRRSVTG 980          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 217 bits (552), Expect = 3.530e-59
Identity = 131/381 (34.38%), Postives = 196/381 (51.44%), Query Frame = 1
Query:    1 DKPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGLR-------------------------------------------------------------ALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 957
            D+P T  EA    +  +W+ A   E+   +   ++  V+RP+ + V+  K +FK K G DG +EKYK R VAKGF Q++G+ + E+ +P    +S+R  LA+ A+LD E  Q+DV+ AFL  D+ EE+Y+++P G+  S + V +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG+                                                              +LM+    TRPDLA+T   L++    PG EHW A+M+A +YL+ TA   + Y G T++ + L  +VDAD A+  + RRSV+G
Sbjct:  924 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQNQKLVKLSEAEIDPKPYQSVLGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRAYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANVNDRRSVTG 1303          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A2N9EX85_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EX85_FAGSY)

HSP 1 Score: 210 bits (534), Expect = 7.750e-57
Identity = 125/339 (36.87%), Postives = 187/339 (55.16%), Query Frame = 1
Query:   13 TLHEA---KMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPN---QVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF-RRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGL------------RALMWVANM-----TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 957
            TLHE    + +S  P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P    +V RL++A+YGL  A   W  KF   +   GF  S  D  +F RR   G  + ++++YVDD+++  +  Q        L   F +KDLG +SY+LGL            +A   V ++     TRPD++Y  H +++F   P   H+ AV++ L+YLK T   G+ +   +  + L A+ DAD A  P  RRS +G
Sbjct:  733 TLHEPHTFREASSDPLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSPKVCRLRRALYGLKQAPRAWFAKFSSTISQHGFSASSYDSALFFRRSDHG--ITLLLLYVDDMIITGDDVQGIQDLKRFLGQHFEMKDLGPLSYFLGLEVSSSSDGYYLTQAKQLVGSLVYLTVTRPDISYAVHIVSQFMAAPRSLHYAAVLRILRYLKGTLFHGLHFSSQSS-LTLQAYSDADWAGDPTDRRSTTG 1068          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: UPI0008FD3D37 (uncharacterized protein LOC104808371 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD3D37)

HSP 1 Score: 207 bits (526), Expect = 1.040e-55
Identity = 130/383 (33.94%), Postives = 192/383 (50.13%), Query Frame = 1
Query:    4 KPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGY-----RDSP-NQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGL--------------------------------------------------------RAL---MWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 957
            +P +  EA +S   PQW  A++ E+      G W +V  P+ K  +G K ++K K   DG VE+YK R VAKGF Q +GI Y+++ SP     ++++ LA+ A  +W   Q+DV  AFL  D+ E++Y+ LP GY     ++ P N V +LQK++YGL  A   W +KF   LI  GF +SQAD  +F +K  G V   ++VYVDD+++     +      + L   F IKDLG + Y+LGL                                                        RAL   +    +TRPD+ +  H L++F   P  EH KA  + ++YLK     G+ Y  A  +++L+A+ DAD A+CPDTRRSV+G
Sbjct:  753 EPKSFKEAILS---PQWTQAMETEIQALTDNGTWSIVSLPQSKKPVGCKWVYKVKRNSDGTVERYKARLVAKGFTQQEGIDYEDTFSPVAKLVTVKLLLALAAIKNWSLTQMDVTNAFLHGDLDEDIYMSLPPGYTPPVGQNLPKNAVCKLQKSLYGLKQASRQWYRKFSSVLINSGFTQSQADHTLFVKKQ-GDVFTALLVYVDDIVIAGNDDRAVQNLKDTLNQHFNIKDLGPLRYFLGLEIARSSKGIALCQRKYCLELLNDTGLSGCKSVSVPMDPNVHLRHDSGQFLSDPTPYRALIGRLLYLTITRPDITFPVHKLSQFLAKPTEEHLKAAHRIVRYLKSNPGQGLYYA-ADSELRLNAFADADWATCPDTRRSVTG 1130          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A5N6MBP8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBP8_9ASTR)

HSP 1 Score: 202 bits (513), Expect = 1.580e-55
Identity = 123/380 (32.37%), Postives = 194/380 (51.05%), Query Frame = 1
Query:    4 KPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGLR-----------------------------------------------------------ALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 957
            +P T  EA  SSE PQW+ A+K E+D  +    W++VD P G   LG + IFKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ A  + E  Q+DV+ AFL  D+ EE+Y+E P+G+  +P Q G+   L K++YGL  A   W +KF   ++  GF+ ++ D CV+  K+  +  VI+ +YVDD+L++    +      + L++ F +KD+G     LG++                                                           +LM++   TRPDLAY    L+++  NP  EHWK++++ L+YL+ T + G+ YG   +   +  + DA+  S     +S SG
Sbjct:  135 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMGLADVILGVKINRTQNGLVLSQSHYVDKILEKFNAGDTSVAQTPIDTTQHLSKNRGEGVAQLEYSRIIGSLMYLMTCTRPDLAYAVSRLSRYTSNPSSEHWKSMIRLLRYLRYTRNYGLHYG--RDPAVIEGYSDANWISDMKDSKSTSG 510          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A401GM49_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GM49_9APHY)

HSP 1 Score: 206 bits (523), Expect = 2.430e-55
Identity = 124/352 (35.23%), Postives = 191/352 (54.26%), Query Frame = 1
Query:    1 DKPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFP-----IK----DLGEISYYLGLRALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLS-AWVDADHASCPDTRRSVSGAR*CSVEEQSVGFRGRRE*PRQQ 1026
            D+  T  EA    +  +W+ A   E+   +   ++  V+RP+ + V+  K +FK K G DG +EKYK R VAKGF Q++G+ + E+ +P    +SIR  LA+ A+LD E  Q+DV+ AFL  D+ EE+Y+ +P  +R     + RL KA+YGL  AG  W KK   E  A GF R  +D  VF +   G  ++II +Y+DD+L+LS+     +   +DL +        IK    ++    Y   L +LM+    TRPDLA+    L++    P  EHW A+M   +YL+ TA   + Y   T + +L   +VDAD A+  + RRSV+G     + E +V +  +++ P  Q
Sbjct:  876 DELQTYEEAMSRPDAARWKAACTEELHAFVKAELYDEVERPRNRKVVDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFTSIRTLLALTAKLDLEIHQMDVKSAFLNGDLDEEIYMNIPPSFRKDNKLIWRLNKALYGLKQAGHKWYKKICAEFEALGFTRCNSDHSVFYKNDNG-TLLIIAIYIDDMLILSDNPTAVNTLKDDLNTPMAQNQKLIKLSEAEIDPKPYQSALGSLMYAMLGTRPDLAFAVGALSQHAAKPSKEHWNALMWVYRYLRGTAEKRLVYQTTTREKELLLGYVDADWAADVNDRRSVTGFV-FHISEGAVSWSSKKQSPTVQ 1225          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A2N9EMC6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EMC6_FAGSY)

HSP 1 Score: 203 bits (516), Expect = 2.780e-55
Identity = 123/353 (34.84%), Postives = 187/353 (52.97%), Query Frame = 1
Query:   13 TLHEA---KMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPN---QVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF-RRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGLR-------------------------------ALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 957
            TLHE    + +S  P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P    +V RL++A+YGL  A   W  KF   +   GF  S  D  +F RR   G  + ++++YVDD+++  +  Q        L   F +KDLG +SY+LGL                                +L+++  +TRPD++Y  H +++F   P   H+ AV++ L+YLK T   G+ +   +  + L A+ DAD A  P  R S +G
Sbjct:  329 TLHEPHTFREASSDPLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSYKVCRLRRALYGLKQAPRAWFAKFSSTISQHGFSASSYDSALFFRRSDHG--ITLLLLYVDDMIITGDDVQGIQDLKRFLGQHFEMKDLGPLSYFLGLEIADTPIEYNNRLNTHDGEPLPDATLYRQLVGSLVYLT-VTRPDISYAVHIVSQFMAAPRSLHYAAVLRILRYLKGTLFHGLHFSSQSS-LTLQAYSDADWAGDPTDRHSTTG 677          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A438I8Z6_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438I8Z6_VITVI)

HSP 1 Score: 205 bits (521), Expect = 4.220e-55
Identity = 121/336 (36.01%), Postives = 184/336 (54.76%), Query Frame = 1
Query:   13 TLHEAKM---SSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGLR------------------ALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 957
            TLHE +    +S  P W+ A+K E+D       W +V  P G++V+G K I+K K   DG VE+YK R VAKGF Q  GI Y+E+ +P    SS+R  LAV A   W+  Q+DV+ AFL  D++EE+Y++ P G     N+V  L++A+YGL  A   W  KF   +   G+  S  D  +F R+   K  +++++YVDD+++  +         + L   F +KDLG +SY+LGL                   +L+++  +TRPD++Y  H ++++   P   H+ AV++ L+YLK T   G+ Y  A   + L A+ DAD A  P  RRS +G
Sbjct:  667 TLHEPQTYREASTDPLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGSVERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARKWDLFQMDVKNAFLNGDLSEEVYMQPPPGLSVESNKVCHLRRALYGLKQAPRAWFAKFSSTIFRLGYTASPYDSALFLRR-TDKGTILLLLYVDDMIITGDDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHSTDGLYITQAKRLVGSLVYLT-VTRPDISYVVHQVSQYLSAPRSTHYAAVLRILRYLKGTLFHGLFYS-AQSPLVLRAFSDADWAGDPTDRRSTTG 999          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A5N6NFL8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFL8_9ASTR)

HSP 1 Score: 198 bits (504), Expect = 5.460e-55
Identity = 121/379 (31.93%), Postives = 191/379 (50.40%), Query Frame = 1
Query:    4 KPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYR--DSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGLR-----------------------------------------------------------ALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 957
            +P T  EA  SSE PQW+ A+K E+D  +    W++VD P G   LG + IFKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ A  + E  Q+DV+ AFL  D+ EE+Y+E P+G+       +V +L K++YGL  A   W +KF   ++  GF+ ++ D CV+  K+  +  VI+ +YVDD+L++    +      + L++ F +KD+G     LG++                                                           +LM +   TRPDLAY    L+++  NP  EHWK++++ L+YL+ T + G+ YG   +   +  + DA+  S     +S SG
Sbjct:  135 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSALGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMGLADVILGVKINRTQNGLVLSQSHYVDKILEKFNAGDTSVAQTPIDTTQHLSKNRGEGVAQLEYSRIIGSLMCLMTCTRPDLAYAVSRLSRYTSNPSSEHWKSMIRLLRYLRYTRNYGLHYG--RDPAVIEGYSDANWISDMKDSKSTSG 510          
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Match: A0A438E504_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E504_VITVI)

HSP 1 Score: 204 bits (520), Expect = 6.030e-55
Identity = 120/336 (35.71%), Postives = 183/336 (54.46%), Query Frame = 1
Query:    4 KPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLVADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGLR------------------ALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK*TASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 957
            +P T  EA +    P W+ A+K E+D       W +V  P G++V+G K I+K K   DG VE+YK R VAKGF Q  GI Y+E+ +P    SS+R  LAV A   W+  Q+DV+ AFL  D++EE+Y++ P G     N+V  L++A+YGL  A   W  KF   +   G+  S  D  +F R+   K  +++++YVDD+++  +         + L   F +KDLG +SY+LGL                   +L+++  +TRPD++Y  H ++++   P   H+ AV++ L+YLK T   G+ Y  A   + L A+ DAD A  P  RRS +G
Sbjct:  830 EPQTYREASID---PLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGSVERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARKWDLFQMDVKNAFLNGDLSEEVYMQPPPGLSIESNKVCHLRRALYGLKQAPRAWFAKFSSTIFRLGYTASPYDSVLFLRR-TDKGTILLLLYVDDMIITGDDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHSTDGLYITQAKRLVGSLVYLT-VTRPDISYAVHQVSQYLSAPRSTHYAAVLRILRYLKGTLFHGLFYS-AQSPLVLRAFSDADWAGDPTDRRSTTG 1159          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig815.19572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401H123_9APHY7.190e-6034.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A401G4V0_9APHY3.530e-5934.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9EX85_FAGSY7.750e-5736.87Integrase catalytic domain-containing protein n=1 ... [more]
UPI0008FD3D371.040e-5533.94uncharacterized protein LOC104808371 n=1 Tax=Taren... [more]
A0A5N6MBP8_9ASTR1.580e-5532.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GM49_9APHY2.430e-5535.23Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9EMC6_FAGSY2.780e-5534.84Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A438I8Z6_VITVI4.220e-5536.01Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6NFL8_9ASTR5.460e-5531.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438E504_VITVI6.030e-5535.71Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig815contigF-serratus_M_contig815:331633..332936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score191.8
Seed ortholog evalue4.1e-46
Seed eggNOG ortholog3750.XP_008387315.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ribonuclease H protein At1g65750
EggNOG OGs37Q53@33090,3GHAQ@35493,4JSM9@91835,COG2801@1,KOG0017@2759,KOG1075@1,KOG1075@2759
COG Functional cat.L
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Exons2
Model size1103
Cds size816
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig815.19572.1prot_F-serratus_M_contig815.19572.1Fucus serratus malepolypeptideF-serratus_M_contig815 331663..332679 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932433.4849277-UTR-F-serratus_M_contig815:331632..3316621622932433.4849277-UTR-F-serratus_M_contig815:331632..331662Fucus serratus maleUTRF-serratus_M_contig815 331633..331662 +
1690964306.8329477-UTR-F-serratus_M_contig815:331632..3316621690964306.8329477-UTR-F-serratus_M_contig815:331632..331662Fucus serratus maleUTRF-serratus_M_contig815 331633..331662 +
1622932433.553337-UTR-F-serratus_M_contig815:332679..3329361622932433.553337-UTR-F-serratus_M_contig815:332679..332936Fucus serratus maleUTRF-serratus_M_contig815 332680..332936 +
1690964306.8688576-UTR-F-serratus_M_contig815:332679..3329361690964306.8688576-UTR-F-serratus_M_contig815:332679..332936Fucus serratus maleUTRF-serratus_M_contig815 332680..332936 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932433.50143-CDS-F-serratus_M_contig815:331662..3323411622932433.50143-CDS-F-serratus_M_contig815:331662..332341Fucus serratus maleCDSF-serratus_M_contig815 331663..332341 +
1690964306.8468442-CDS-F-serratus_M_contig815:331662..3323411690964306.8468442-CDS-F-serratus_M_contig815:331662..332341Fucus serratus maleCDSF-serratus_M_contig815 331663..332341 +
1622932433.529617-CDS-F-serratus_M_contig815:332542..3326791622932433.529617-CDS-F-serratus_M_contig815:332542..332679Fucus serratus maleCDSF-serratus_M_contig815 332543..332679 +
1690964306.8583047-CDS-F-serratus_M_contig815:332542..3326791690964306.8583047-CDS-F-serratus_M_contig815:332542..332679Fucus serratus maleCDSF-serratus_M_contig815 332543..332679 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig815.19572.1

>prot_F-serratus_M_contig815.19572.1 ID=prot_F-serratus_M_contig815.19572.1|Name=mRNA_F-serratus_M_contig815.19572.1|organism=Fucus serratus male|type=polypeptide|length=272bp
MSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQD
GRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEG
RQLDVEMAFLVADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLW
SKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQ
DEHRAMEDLRSSFPIKDLGEISYYLGLRALMWVANMTRPDLAYTAHTLAK
FGDNPGPEHWKAVMKALQYLK*
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mRNA from alignment at F-serratus_M_contig815:331633..332936+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig815.19572.1 ID=mRNA_F-serratus_M_contig815.19572.1|Name=mRNA_F-serratus_M_contig815.19572.1|organism=Fucus serratus male|type=mRNA|length=1304bp|location=Sequence derived from alignment at F-serratus_M_contig815:331633..332936+ (Fucus serratus male)
GACAAGCCCACCACCCTGCACGAAGCGAAGATGTCCTCCGAGTGGCCGCA ATGGCGCGGCGCGCTCAAGCGCGAGATGGACGGCCAGATTGCGCGTGGTG TGTGGAAGGTCGTCGATCGACCAAAAGGAAAAACCGTACTCGGCACCAAG ACCATTTTTAAACGGAAGGTCGGCCAGGATGGCCGTGTAGAAAAATACAA GTGCCGCTTCGTGGCCAAGGGTTTCCGCCAGATCAAGGGGATTCATTACC AAGAGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGGATGGCGCTG GCGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCTTGACGTAGAAAT GGCGTTTCTCGTGGCGGATGTTACGGAGGAGCTATACGTTGAGCTCCCCG ATGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTGCAGAAGGCCATG TACGGTCTGATGCACGCCGGACTACTGTGGTCGAAGAAATTCGGCGGAGA GTTGATAGCGAAGGGGTTCGAGAGGTCCCAAGCCGATCCCTGCGTGTTCC GGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATAGTGGTCTACGTTGAC GATCTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCGGGCGATGGA AGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGGAGATCTCGTACT ACCTGGGATGTCACATTACTCGGGACCGCAAGGCCAGGACGGTGACGTTC GATCAGCAGCGTTACGCGCAGACGGTAACCGAGTGATTCGGAATTCGGAA GACCAGCGTGATCCCTGTTCCTACGGGGAAAGCACCACTTTCGAGGGCAG ACGGGCCGAAAAACGACGCTGAGATCGCAGAGATGCATGGCATCCCGTAT CGCGAGGCAGTGAGGGCACTAATGTGGGTAGCCAACATGACTCGGCCTGA CCTAGCTTATACCGCGCACACGCTCGCCAAGTTCGGTGACAACCCCGGGC CCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTGAAATGAACG GCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACATGAAGCTATC GGCATGGGTGGACGCCGATCACGCATCATGTCCTGATACGCGTCGTTCGG TATCGGGGGCGCGGTGATGCTCGGTGGAGGAGCAATCAGTTGGTTTTCGC GGGCGCAGAGAATAACCGCGACAGCAACGTCCGAATCGGAGTACGTAGCA CTGGCGGAGATTGTGAATGAGCTACGTTTCCTTCGGCAGGTGAAAGCGTT CATG
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Coding sequence (CDS) from alignment at F-serratus_M_contig815:331633..332936+

>mRNA_F-serratus_M_contig815.19572.1 ID=mRNA_F-serratus_M_contig815.19572.1|Name=mRNA_F-serratus_M_contig815.19572.1|organism=Fucus serratus male|type=CDS|length=1632bp|location=Sequence derived from alignment at F-serratus_M_contig815:331633..332936+ (Fucus serratus male)
ATGTCCTCCGAGTGGCCGCAATGGCGCGGCGCGCTCAAGCGCGAGATGGA
CGGCCAGATTGCGCGTGGTGTGTGGAAGGTCGTCGATCGACCAAAAGGAA
AAACCGTACTCGGCACCAAGACCATTTTTAAACGGAAGGTCGGCCAGGAT
GGCCGTGTAGAAAAATACAAGTGCCGCTTCGTGGCCAAGGGTTTCCGCCA
GATCAAGGGGATTCATTACCAAGAGTCATCGTCGCCGACACCTACACAGT
CGAGCATCCGGATGGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGG
CGGCAGCTTGACGTAGAAATGGCGTTTCTCGTGGCGGATGTTACGGAGGA
GCTATACGTTGAGCTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTG
GACGACTGCAGAAGGCCATGTACGGTCTGATGCACGCCGGACTACTGTGG
TCGAAGAAATTCGGCGGAGAGTTGATAGCGAAGGGGTTCGAGAGGTCCCA
AGCCGATCCCTGCGTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCA
TCATAGTGGTCTACGTTGACGATCTACTAGTGCTGAGCGAAACGAAGCAG
GACGAGCATCGGGCGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGA
TCTAGGGGAGATCTCGTACTACCTGGGATATGTCCTCCGAGTGGCCGCAA
TGGCGCGGCGCGCTCAAGCGCGAGATGGACGGCCAGATTGCGCGTGGTGT
GTGGAAGGTCGTCGATCGACCAAAAGGAAAAACCGTACTCGGCACCAAGA
CCATTTTTAAACGGAAGGTCGGCCAGGATGGCCGTGTAGAAAAATACAAG
TGCCGCTTCGTGGCCAAGGGTTTCCGCCAGATCAAGGGGATTCATTACCA
AGAGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGGATGGCGCTGG
CGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCTTGACGTAGAAATG
GCGTTTCTCGTGGCGGATGTTACGGAGGAGCTATACGTTGAGCTCCCCGA
TGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTGCAGAAGGCCATGT
ACGGTCTGATGCACGCCGGACTACTGTGGTCGAAGAAATTCGGCGGAGAG
TTGATAGCGAAGGGGTTCGAGAGGTCCCAAGCCGATCCCTGCGTGTTCCG
GCGGAAGCATCTAGGGAAGGTCGTCGTCATCATAGTGGTCTACGTTGACG
ATCTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCGGGCGATGGAA
GACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGGAGATCTCGTACTA
CCTGGGATTGAGGGCACTAATGTGGGTAGCCAACATGACTCGGCCTGACC
TAGCTTATACCGCGCACACGCTCGCCAAGTTCGGTGACAACCCCGGGCCC
GAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTGAAATGATGAGG
GCACTAATGTGGGTAGCCAACATGACTCGGCCTGACCTAGCTTATACCGC
GCACACGCTCGCCAAGTTCGGTGACAACCCCGGGCCCGAGCACTGGAAGG
CAGTAATGAAAGCGCTACAGTACCTGAAATGA
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