mRNA_F-serratus_M_contig815.19566.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig815.19566.1
Unique NamemRNA_F-serratus_M_contig815.19566.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig815.19566.1 vs. uniprot
Match: A0A6H5JZD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD2_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.580e-56
Identity = 120/208 (57.69%), Postives = 136/208 (65.38%), Query Frame = 1 
Query:   31 MGGSPLSLSLAHDLLRELRQGTRRIEVVNSSGRRINDDSWTKDAIETFNNWSIRTVASCRDALVSARFEANKLFLERGRGGPKGGSAEVATAPVLQAERDLEHVRSELRRAIIARKRREERRQTSNGRAALLGTGAANNGVTRRQNLRGRGQEDAPGSAEGQAREMNQSLKRTRKMMAEQLARVAQVSEVMGEQDVLLRDTFTEHQAR 654
            M     SL   +DLLRELR   R+IEV   + R   DD+WT+  IE FNN SIRTVA+CRDAL  AR+E  +                 + A V+QAERDLEHVR ELRRA+  RKR EERR  +  RAALLG     +G  RR    G G +DAPGSA G AREM QSL+RTRKMMAEQLARVAQVSEVMGEQD LL +TF EHQAR
Sbjct:    1 MAAQTPSLVRVYDLLRELRLSIRKIEVAAGT-REGEDDAWTRHQIEAFNNASIRTVAACRDALTEARYEGEQHEAGXXXXXXXTDGGSDSLAKVVQAERDLEHVRMELRRAVTLRKRHEERRYDATNRAALLGA-ECGDGPRRRGYNSGGGSDDAPGSAAGDAREMKQSLQRTRKMMAEQLARVAQVSEVMGEQDALLMNTFAEHQAR 206
[Close]
BLAST of mRNA_F-serratus_M_contig815.19566.1 vs. uniprot
Match: D7FSJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ1_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.130e-51
Identity = 104/161 (64.60%), Postives = 118/161 (73.29%), Query Frame = 1 
Query:  349 ELRRAIIARKRREERRQTSNGRAALLGTGAANNGVTRRQNLRGRGQEDAPGSAEGQAREMNQSLKRTRKMMAEQLARVAQVSEVMGEQDVLLRDTFTEHQARRCICRQGGIGGSLRRAGTTLTRLSTADVMDKVVMVASTMFFFSTVCFILYQRLPMLGLL 831
            ELRRA+  RKR EERR  +  RAALLG     +G  RR        +D PGSA G AREM QSL+RTRKMMAEQLARVAQVSEVMGEQD LL +TF EHQ         GIGGSL+RAGTTLTRL  A+VMD ++MVAST  FF+TVCF++YQRLP+LGLL
Sbjct:    2 ELRRAVTLRKRHEERRYDATSRAALLGA-EGGDGPRRRGYNSXXXXDDTPGSAAGDAREMKQSLQRTRKMMAEQLARVAQVSEVMGEQDALLMNTFAEHQ---------GIGGSLKRAGTTLTRLKAAEVMDTIIMVASTFVFFATVCFVIYQRLPLLGLL 152
[Close]
BLAST of mRNA_F-serratus_M_contig815.19566.1 vs. uniprot
Match: A0A835ZB28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB28_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.650e-22
Identity = 82/259 (31.66%), Postives = 130/259 (50.19%), Query Frame = 1 
Query:   61 AHDLLRELRQGTRRIEVVNSSGR--RINDDSWTKDA-IETFNNWSIRTVASCRDALVSARFEANKLFLERGRGGPKGGSAEVATAPVLQAERDLEHVRSELRRAIIARKRREERRQTSNGRAALLGTGAANNGVTRRQNLRGRGQEDAPGSAEGQAREMNQSLKRTRKMMAEQLARVAQVSEVMGEQDVLLRDTFTEHQARRCICRQGGIGGSLRRAGTTLTRLSTADVMDKVVMVASTMFFFSTVCFILYQRLPMLGL 828
            A  LL +L +  +R+E     G    +++ SW     ++ FN  +IR V  CR+AL +A  EA                          A+ +L+ +R+ LR A++   R   +R+ +  R   L  GAA              ++D  G    Q+  +  SL R+R++MAEQ+AR++ V++++GEQD LLRDT  EH+         G+GG++ RA   LTRL+   +MD V M AST  FF+ V ++++ R+P  GL
Sbjct:    7 ADRLLEDLSRRVKRLEAPAGDGTVATLSESSWQPPQDLQAFNKAAIRVVGQCREALEAASLEAQACST---------------------AQNELDSLRTALRGALLQASRHVAQRRDA--RRDFLLAGAA--------------EDDGSGD---QSAAVASSLARSRRVMAEQVARMSSVAQLVGEQDQLLRDTAEEHK---------GVGGTVGRASMLLTRLNAQAIMDAVAMAASTAMFFAAVLYVIWARVPGFGL 216
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig815.19566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZD2_9PHAE1.580e-5657.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSJ1_ECTSI1.130e-5164.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZB28_9STRA2.650e-2231.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig815contigF-serratus_M_contig815:89142..99838 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSec20
Ec32 orthologEc-11_003900.1
Exons6
Model size852
Cds size813
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig815.19566.1prot_F-serratus_M_contig815.19566.1Fucus serratus malepolypeptideF-serratus_M_contig815 89172..99829 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932431.9732196-UTR-F-serratus_M_contig815:89141..891711622932431.9732196-UTR-F-serratus_M_contig815:89141..89171Fucus serratus maleUTRF-serratus_M_contig815 89142..89171 +
1690964305.7254832-UTR-F-serratus_M_contig815:89141..891711690964305.7254832-UTR-F-serratus_M_contig815:89141..89171Fucus serratus maleUTRF-serratus_M_contig815 89142..89171 +
1622932432.0873437-UTR-F-serratus_M_contig815:99829..998381622932432.0873437-UTR-F-serratus_M_contig815:99829..99838Fucus serratus maleUTRF-serratus_M_contig815 99830..99838 +
1690964305.8158398-UTR-F-serratus_M_contig815:99829..998381690964305.8158398-UTR-F-serratus_M_contig815:99829..99838Fucus serratus maleUTRF-serratus_M_contig815 99830..99838 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932431.9979064-CDS-F-serratus_M_contig815:89171..893091622932431.9979064-CDS-F-serratus_M_contig815:89171..89309Fucus serratus maleCDSF-serratus_M_contig815 89172..89309 +
1690964305.7371533-CDS-F-serratus_M_contig815:89171..893091690964305.7371533-CDS-F-serratus_M_contig815:89171..89309Fucus serratus maleCDSF-serratus_M_contig815 89172..89309 +
1622932432.0125816-CDS-F-serratus_M_contig815:89475..895681622932432.0125816-CDS-F-serratus_M_contig815:89475..89568Fucus serratus maleCDSF-serratus_M_contig815 89476..89568 +
1690964305.7498136-CDS-F-serratus_M_contig815:89475..895681690964305.7498136-CDS-F-serratus_M_contig815:89475..89568Fucus serratus maleCDSF-serratus_M_contig815 89476..89568 +
1622932432.0283296-CDS-F-serratus_M_contig815:94216..942641622932432.0283296-CDS-F-serratus_M_contig815:94216..94264Fucus serratus maleCDSF-serratus_M_contig815 94217..94264 +
1690964305.7589598-CDS-F-serratus_M_contig815:94216..942641690964305.7589598-CDS-F-serratus_M_contig815:94216..94264Fucus serratus maleCDSF-serratus_M_contig815 94217..94264 +
1622932432.0425694-CDS-F-serratus_M_contig815:98021..981671622932432.0425694-CDS-F-serratus_M_contig815:98021..98167Fucus serratus maleCDSF-serratus_M_contig815 98022..98167 +
1690964305.7681499-CDS-F-serratus_M_contig815:98021..981671690964305.7681499-CDS-F-serratus_M_contig815:98021..98167Fucus serratus maleCDSF-serratus_M_contig815 98022..98167 +
1622932432.0577257-CDS-F-serratus_M_contig815:98854..990741622932432.0577257-CDS-F-serratus_M_contig815:98854..99074Fucus serratus maleCDSF-serratus_M_contig815 98855..99074 +
1690964305.7844455-CDS-F-serratus_M_contig815:98854..990741690964305.7844455-CDS-F-serratus_M_contig815:98854..99074Fucus serratus maleCDSF-serratus_M_contig815 98855..99074 +
1622932432.0733135-CDS-F-serratus_M_contig815:99661..998291622932432.0733135-CDS-F-serratus_M_contig815:99661..99829Fucus serratus maleCDSF-serratus_M_contig815 99662..99829 +
1690964305.8031297-CDS-F-serratus_M_contig815:99661..998291690964305.8031297-CDS-F-serratus_M_contig815:99661..99829Fucus serratus maleCDSF-serratus_M_contig815 99662..99829 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig815.19566.1

>prot_F-serratus_M_contig815.19566.1 ID=prot_F-serratus_M_contig815.19566.1|Name=mRNA_F-serratus_M_contig815.19566.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MGGSPLSLSLAHDLLRELRQGTRRIEVVNSSGRRINDDSWTKDAIETFNN
WSIRTVASCRDALVSARFEANKLFLERGRGGPKGGSAEVATAPVLQAERD
LEHVRSELRRAIIARKRREERRQTSNGRAALLGTGAANNGVTRRQNLRGR
GQEDAPGSAEGQAREMNQSLKRTRKMMAEQLARVAQVSEVMGEQDVLLRD
TFTEHQARRCICRQGGIGGSLRRAGTTLTRLSTADVMDKVVMVASTMFFF
STVCFILYQRLPMLGLLWPF*
back to top

mRNA from alignment at F-serratus_M_contig815:89142..99838+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig815.19566.1 ID=mRNA_F-serratus_M_contig815.19566.1|Name=mRNA_F-serratus_M_contig815.19566.1|organism=Fucus serratus male|type=mRNA|length=10697bp|location=Sequence derived from alignment at F-serratus_M_contig815:89142..99838+ (Fucus serratus male)
GTTGGCACTGGTAACCCGTTGACATTGAGGATGGGAGGATCCCCTCTCTC
ACTTTCCCTCGCCCATGACCTCTTACGAGAACTCAGGCAAGGGACGCGTA
GAATAGAGGTGGTGAATTCGTCTGGAAGACGGATCAATGACGATTCCTGG
ACAAAAGATGCAATTGAGGTAAGCACACACTCTCTCGGAGATTTTCTCCC
GCCTGGAAACGACGCTTTTTCTCATAGGGAGAATTGCAATCGATATGCTG
TACACCTCCAACGGGATGTCCTAATTCTCTCGATCTCGGCCCTACCAATT
TTATGGACGTCTCTCGATCATTTCATGTGCGGAGACCTTCAACAACTGGA
GCATTCGGACGGTTGCCTCCTGTCGCGATGCGCTGGTTTCCGCGAGATTC
GAGGCGAACAAACTATTTTTGGAACGAGTATTTCAACGACGATGTAGGCG
CTGAGTCGGAGTCAATTCAATTCAACGCAACGAATGTAGGCGCTGGTGAG
AAGTCGAAAACGCGAAAACGCGATTCGATTCTGGCGACGAACTCATTTCG
CTCCCTATCTCCTCATAATAACTGTTTGCGTGGACTAGTGTGGCACGATT
TAAAAAAAAAAACGTTTTTTGGCCTAGTAGGTAACCTGCACACCTGCACT
AGTGCGGAAGTCGGGAGTTCGATTCTTACCTAGAGTAGGTTTTGTGTTTT
TTCTTTCGTAACGGAAAGCGTGGGAACCTGAGTGAGTAAAATTCAACCAT
TGGTTGACGAGTTGTCTGGTATCCCCCGGGCGTTCTGTCTGCAGATGTCA
TGGCGCGTTTGTTTTGTTTTGCTTCCTTTTCGTCTTTATGCTTTCGTTGA
AGCCGCGGCCTTTCGTTCAATCGTCCTTCGATATGCAGGCGCCCTGGTAG
CCGCACGTGTTTCTTTCTTGCTCTTGGTTTATTTTGAAGATGTCGCTTTT
TCCGAGTATTTTTGTACCATTTCCGCTTTCTCTTTGTATGGAGAGTATGC
CGTACGTTCTTTCCTTCCGAATGGTGTTTTTCTACCTTGTGACCACGGGC
TGGATTTTTTTACATGAGCTTATGTGAGAATTCAATTAATCAATCAAGAT
TGCTGAACTTGTATCGCGATAAAAAAAAATGTAAGGCGTGAACCGGGGGA
GATGGGAAAAATCCTTAGTGACTACAGGAAGGATGGTAATGATGAGGTCC
ATCGACTATACTATTAGTAAGTGAAATTAAAGAACAAGAAGAAAAAAAGT
CTAGGTAGTGAAGAATTTGGTCTGTGTTGTGACCTGGGGAAACAGACCCT
ACCAAGCTGGGGCTCTCTTCATTTGCACAAGACTACAAGTACTGCCACCA
CGATCGCGCTTGCGCCTCAAGCCTTCCGCCTCAAACTTTCGTGGAGCACC
CATCTTTATATCTCAGACTACAACGACGAGCAAGCACGTTCGTACGACGA
CAAAGGTTGCCAAGAAAGTGCAAGTGTTATTCAACGGAGCTCATCGGCAA
GTGCCTCGCTTCGCTCTCGCTGCCACAGCGCCGCTCTTTCTCTCGCGAGC
TGTGACTTGCTTCAACCGATAGCCCCATCGCAGGGTTATACCATTATACG
CCGATACTTTCAGCATGCCCACTTCATACCAATAGTGGGTGTGGGAAAGA
GGGGCGTATATCAATTGGTCCATGGTGACCTGCTAAGGCAGCACACGTTC
GGAACTACCTTGAAGTTTACTGGACCTGTGCCGACGGACTCTCGGCAGTG
AAGGCCATCGGTACGCAATTGCGTGACCCGATGAACTCGGGGCTTACCCG
ATGGCGTATGGCGGTTTAATATATATATATGGACGCCGCCGCGGAATTTG
GGAGGAATCCCGTAAGTAAGCACCATACTCAGCCTGAGTGTGGAGAGTGA
GCAGGCTAACGCGGTACAGGACGGCCGAACCTGTCTCGTGAGACCAATTT
CTCTAGCACGAACGCGGACAGGGAAATATTAATCTCCCCTGTTCAGCTGA
CCACGAGCAGAATTGGTAACCTTACCCGGTTGATCCATACTCTTGCTATA
TTTGTGATCATACAAACATGCATGGTGTTCATGTGCGATTTGGAGGCCAG
CTTTCTTCGCTACAACGGTAGCCTACATCTGCTACAGTAGTGGGATTTGG
TGCGGCGGAACCTCGATTTTCTGGTGTGCAGCAACCATTTGCTGTGCGTG
CTTTATCTAGGGTTTAGAGAAAAAAGCTGTCGGGCAAAAATTTTGAAACA
AACGTTCCAATGTTTGAAAATATTTTAAACAGTGTTTCAGCAGTTTGGTG
ATATGCTCGAAAGAGTTAAAATAAAAATCTGAACGCATCCTGACCTTTTG
AGCATACTGTACCCCAGTCAGGGGGGAAAATGTCAAAACGTTTACCAGGT
AGGTGGGATCATAGGCTGCAAAGACAAAAACCTCTTCATGGCATTTGAAC
GGATTCCCCTATATTAGTAACACTGGGTCAACAGTATAATGTCGGGGAGA
AGCCCACCGTTTTACTGTACAGGtACACTTACATTAATCGCCATGCGGGG
ACACCAAAAAAAAAGTATTAATAGTACATTAAACAGGGCAGTAATAATAC
ACGATAATAGTTTCATCGAACCATACCACAATACAGTATGAGCTATAGTG
TAGTATGATAAATAAGAGCGTTATGATTTTGTAAGATTGGCAAAAATATT
ACATTTTCGTTTTACAACCTTTAATAGTCATAGTCCATAGGGACTTTTTA
CGGTGCCAATCTAATCAGTGCGTGGTTGTGCTTCACACTACGTGTTACAT
TTTTGACAGCAGAATGAGTAAGGTATAGTATAGGTCGTGGTAACGGTAAA
TGCATACGAGACACTGGTATTCGCCTGAAAGACTACAGTATGTACCAGGT
AGTGTATAGTAGACGAAGAACCGAAGAGCAGTGGAGGCCCACAAAAAGGA
AATGAGAGGCAGGTGGGCGGAGATCGCACGCATTCCTGTCACAATGCAAC
CACTCGCCTGCTCCATAATACCAACTCTAAGTCGGCTAGCAAAAGCCTCG
CGAAGGCTTGACACGATAAAGCCAAACGCACGCCTTCTTTGGAGCAGCAA
CAATTGTTTGACCGCGAGCCTCCTTCCCCAACCGGTTCAATGGATCACAA
ACATCGATTACTTCGTTTGTACGATAGACCATAGTCTGTCTGATCGATAC
TCTTAAGCCCGAGGGCCAAATAACGACCTCGCTAGAGATAGTTATACCCG
TGCTCGATATTTGTAGGCTGTTCCAGATAAAAAGCTCTCACTTATCTGTG
GCTGGATTAACAGTGTTTGTTACCTTGAGCGTTTGAGTGATGGTAACTCT
GGAGAATATAGCGCGTTTGAAGAATACAGGCACCACTTGTAGCTTATCCC
TTTACTTCAAATCTTGGAGCACCTTGACGAAGAGCTCGTCCACAATTATT
CACCAGCAGTCACGATCAAAATGGGATAACATAAATTTTTTACCTCGAGC
GTTTGAGCAAATTTTGCTCTGCAGAATTTAGCGCCTTTGAACAAGTCGTT
GCAGCGTATGATACATTTTGACATTCCTTCCCCCTGACTGGGGGATGCGC
AGAAAGTCTGGATGCGTTCAGATTCGGTCAGATGTTTCTTGAAATACCAC
CTCTATAATAGCGCTTACCAGGCCCCGAATCGTTTCGCACCGCCACCGAC
CGATGGTCTGTACCACGGTTGATCGACCGTTGTTGCGCGATTTTTGGATC
GGCTCTTTTTGTGACGCTGTAATAGCCGTGGACGTCCAAAGTTCAGCGCA
ATCCCCCCCCCCCCCATCCCCTCCCGACAGACATCCTTCCTTCTAAAATG
TTGGGGGTTTAATTCTTTTGATGAGTCATAACCCTGGTTTTTGCAGGTCT
TTGAACACGTGGGAGTACTCGTATTGCATTTCTGTGCGATTTGTCTCAAG
AAACAACCGACAGCACTTCCCGTCTGGATATCTTGACGAGAGTATAACCG
ATATATATGAGGGGTTTTACGCCAAGGAAAAAAAGCATTGGGGGGGGGGG
GTGGGGGGGAATGCGCCTGCTGAACGTCGAAAGAGCTTTTTTTCTTTCAG
GGAGATTTTTCCAGTGCGGAGGCCAAGTTTTGGGGTGTTTTTTTGTCTTC
TTGTAGACTTCCCTTAGAGGTGCAGCAGAGCGCACCAACCTCGAGCCATG
GGCCGGCCCGAGACGGGAAATTGCTTGGAAGTACTGCTGAGGGCCTGGGG
ATGTTGTCCTTGCTGTTATTGATTTGAACGCATTTATGAGTGCTGCAGCT
TCTACCGAAGCTGTCACGTAGGAAAAATGAGAAAGCAGGAGTAACGGCGG
CCAAGGAAATGCTCGCCTCGGAGCCTTCGCTTCCTCTTTCCTCCTTCCTC
CTTCCTCTGAGGCGAGAGAGTCCAAGCTGAGTAGACCGCAGTTTGTACAA
GATGCTCAAGAAATGAGGAGCATTTTTCTGGCCATACACCTCGATGTGCA
ACGAAATTGATTCCGAAGGGCGTGAGCTCATTTCCGCGACAGCACAGGAG
ATTGATTCCAAGGGAATCGAAGCCGAGGGCTGTGTCACCTGCGCAGACGA
CGGCAAGGTCGCGGTTGGCAGTCAGGTCGCCAGCAGCTTGCGCAAGCATC
GGGTATCCATCGTGCAATTAACCACGCGCTTTTCTGCCTGCACCCGGGTC
CTACGTCTGTAGTAGAAGGAGTTCAAGATGGGTCCGATGGCCTGCGCGTC
AGTAAAAGGTGGCGGGCGACTGAATCCGCGCGGGGTGGGGTCTGCTGTAG
TGCACGCGGAAGCGATGGAGAAATGTTTCGCTAGGGGTGTTCGGGGGGCT
GGTGGGGGGTAGAGGGCTACGAGGGAACGGTGAGGAGGCCGAGATTGGGA
CACAGGGGCTATAGAGCTATGGGGTTTGGGTTAGATGTAGGGTTGGCGAT
GGGGAAGACGGAGCAGACATAACTCAGCCAAAGCGTGTGTCTCTCTCAAG
CGATTACACTAGCACTCGTATTACTATTAAGGTGTATTCGTACTTTTTAT
TTTTATTTGAAATAATTCGAACGAGGGAAGAGGTGGGCCCAAAGGGGGAA
GCGCCGAGGTGGCCACAGCACCGGTGTCGAACGGGGCGCCAACGGTATGG
TCATCACATATAGCAGAGTATGGATCAACCGGGTAAGGTTGTCAATCCTG
CTCGTGGTCAGTTGAAGAATATTCCCCTATTCGCGTTCGTGCCTGAGAAT
TTGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGCTCA
TCTCCATACTCAGAAGGCTGAATATGGTGCTTACTTACGGGATTCCTCCC
GAGTTCTGCGGCAGCGTCCATATCTTTTATTAAACCGCCATACGCCATCG
CGTCAGTCCAGAGTTTATCGGGTCACGCAGTTGCGTACCGATGGCGTTCA
CTGCCGAAAGTCCGCTTGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGA
ACAAGTGCTGCCTTGGCAGGTAACTATGGACCAATTAATATACGCCTTTC
TTTCCCATACCCACTATTGGTATGAAGTGAGCATGTTGAACGTACCGATA
GTATCGCAGCGGTAACGCCCCAACTTTACCGGGCGCACTGTTTAAATAAC
TGTTTTAATACGGGGTTTCGTTTTTTTCAACAACGTGGAAAAATAGATTA
GATTCAGTATCATGTTATTTGATTGGTTGAGGGGAAACAGTTAGAAAGGG
CACCGTAGCTCTTCAGGATCAAATGTATTTTATTGGTTGAGGGGAAACAG
TGGGAAAGGGCACCATAGTTCTTCAGTATCAATGTATTTGATTGGTTGAG
GGGAAACAGTGAGAAAGGGCACCGTAGCTCTTCAGGATCAAATGTATTTT
ATTGGTTGAGGGGAAATAGTGGGAAAGGGGTATATCAATGTATTTGATTG
GTTGATGGGAAACATTGGGAAAGGGCACCGTAGCTCTTCAGGATCAAATG
TATTTGATTTGTTGAGGGGAAATAGTGGGAAAGGGTATCAATGTATTCGA
TTGGTTAGTGGGAAAGGGTGCTTCAGTATCAATGTATTTGATTGGTTGAG
GGGAAACAGTGGGAAAGGGCACCATAGCTCTTCAGTATCAATGTATTTGA
TTGGTTGAGGGGAAATAGTGGGAAAGGGTATCAATGTATTTGATTGGTTG
ATGGGAAACATTGGGAAAGGGCACCATAGCTCTTCAGTATCAATGTATTT
GATTTGTTGAGGGGAAATAGTGGGAAAAGGTATCAATGTATTCGATTGGT
TGAGGGGAAACAGTGGGAAAGGGCACCATAGCTCTTCAGTATCAATGCAT
TTGATTGGTTGAGGGGAAATAGTGGGAAAAGGCACCAGTAGAAATCCAAC
GCGAGGCACATAATACAACATACAGTAATGTATGGTCACACATATAGCAA
GAGTATGGATCAACCGGGTAAGGTTACCAATCCTGCTCGTGGTCAGCTGA
ACAGAAAAAAATACATATTTCCCTATCCGCGTTCCCGTCTGAAAATTTGG
TCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCCC
CATACGCAGGCTGAATCTGGTGCTTACTTCCGGGATTCCTCCCGAGTCTC
GCGGCGGCGTCCATTTATTTATTTAAAGCCGCCATACGCCATCGGGTCAG
TCCCGAGTTCATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCG
AGAGTCCATCGGTACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGT
GCTGCCTTGGCAGGTCACCATGGTCCAAATAATATGCGCCTCTCTTTCCC
ACACCACCCACTATTGGTATGAATTGAGCATATTGAAAGCAAATGTAAAG
TATCAGTAGTAGATCATTAAGCTCTTCGTTTACATTTTTCGAGGGAGGGC
TTAGCGTTTTGGGGCCGACTGCTAGCACCAGGCGATCCCACCCACCGTGT
TGATATAACTCGGGGTGCAGGAAACAAAGTAACGGCAAGCTCCCAGTTGA
GCCTGTAAAAAGTGAAGAACGAGTGCACCTCCACATCAAAATTGGGAGAC
AGCAAGGTTAAAAGTTTAAACAAGTACCAGGTAATAATGCTTTCATCGGT
CAATGTATGTATGGTCATCGCATGTGGCAGAGCATGGATCGACCGCGTAA
GGTTGCCAGTCCTGTGTAGGGCTTTTAAAGCTATACTGGTACGCATTTGA
GTTGGGGGTTGGTGTGAGACTCCCTGAGTAGAAGCAAATGCACAGCTATG
ATACAGTATTTATTTTTAAAAAATCTGGAAACCACGGTAAATGTGAAGAT
GTACGATTCCTTTTAGATACTATTGAGAGTTACGCAAGAGTTTTTTGTTT
TTTTTTTTGTTCTGGTACAAGTGCGTGGTAGCTAATGTTCCAGGTACTGT
ACAGTATACTCTATATAAAGTATATTACTATTATAGTGGGTGGGGTCGTT
TGCTGTGAGTACAGGAATGAGGCGCGCGCATGGTGCCGAGAGTGTCAAAA
CAGCGATGTCTTTTGCGGCCCGCTAACGTGTTGGCGTGCTCTGCTGTCGA
CGTTTGAGATGCGGTGTACCACGGTGATACCTTATTGATAAGGTATCAAT
ACCTTATTGATACCTTATCAATACCTTATTGATACCTTATCAATGCCTTA
TTGAAACCTTATTGATACCTTATTAATACCTCATCAATAGGCAATTACGA
GCCGTTCAACGATTGGGGGGGGGATGTCACAAATTTGTCCCCGTTTTAGG
AGGGGACGGCGCAAAAATAGCTCCTCCCGGGGACATATTTGACCAACCCC
CTGGTGAAATGATTTGAATTCGGGGCAAGCTTGCCGACCATGTAGAGGAT
CTTGTCGTCCTATCCCAGAAAAGGGTTGTTTTGGTAACCTCACCGGGGAC
GGAATCATCGTGTCCCCCCCCCCCAATCATTAAAAATAATATTTACAGCA
AGGGGAATAATCCCGACCCATACTAATCTCAACACAATTTAGTTCCCCGT
TTGAGTTGCGGGGACAATGTGGAACCAAGTTATACTATTAATAGGGGCTA
TGCATGTAGCCGTGCATGTTATGCTCTAGACGAGTGCGTCTCATCTAGCA
TGGCGTATGTATGTAACGACCGAGGTATGAATCCCCCGTGACGATCAACA
GCTCTGCTAACGCCACTTTATCCGGCGAACGAGTTTAAGGAGCAAAGATG
TTACAGTCGTGTTCGAAAGTTGGTGGATTGTTGGAAGTGCGAAAGCCATA
GAATCCCATAATGAGGATCTGGACTGTTATCACGCGTTTCTGGAGGTGTG
TGGAAACGATGGTCAAAATATATTTAAATGTGCTCGTAGATTGATGTGGC
GCACCTAAATGTAAGAGATTGTTAGTCTCTAACGGGTATATTGTATATTT
GCATTCCTTGGGAGACAAAATCATAAGATGCGTAACGATCTTTGTAAAAA
AAAAAAGCGACTAGGCTCCATGTCCGGTATTGTAGCTATATTGTTACTGT
CCGGACGTTACCTATGTTCAAGGTACGCGTGACCTCAGCTCAAAAAAAAA
AAGTTACAGAACTTCTCGTGTCATCGAAGGCTTGAAATAAAAACATTCTG
TGGAATAAAATAAATAAATAAATAGGCGCAGTTCTACCTTGCGCCGGTTG
ATTTTTCCAGCTCCTGTTGATACTACAAGTAATAGTTACTCGCGCCAGTC
GCCTTTGTCCAAACGATCTCTGCAAACGGAGTCAGTTCAACATTTGATTA
CAGTATCGCGAACGGACATGTTTATGCCCACACGCACGGTAAGGTGTCGA
TGCGGATTGCCCGCTCGCTCGCGATGACAGGTTTTACAAGCCGAGAGGGA
TCTGGAGCACGTCAGGAGCGAGCTGCGACGAGCGATCATCGCGCGCAAGC
GAAGGGAAGAGCGGCGGCAGACCTCCAACGGTCGCGCCGCCCTCCTAGGA
ACCGGGGCCGCGAACAACGGTGTAACGTGAGGGGAAATTTAAGATACACG
TGAACGGATGCGTTGACCTGTTTCGCTACCCTGGGTGTTTAAAATAGTTA
AAAAAAAATACTGGTACCAGGTACAATTTTCCGCTCTAGCTTCTCGTGCG
GGTGGTAGGTCGGGTGGGCGAGGTTGGCTAAGGTGGGTTGGGTTGTGTCT
GTATGGGTTCGGTTGGGTTGAGTTGGGCCGGTTGTGTGGAGTTGAGTAGT
GTTGTTTGGGTTCCAGAATCAGGGGTTCGGGGTCATCATAGTTTTTGTCG
AATATCTCGGGCTATTTTTTGTCCGTTAGACTCTCTTTGATGTCGGAATG
CGGGCGTCCTTAACTGTCTCGACGACCGCACGCGTGTTTCCCTGTAATAG
GCTAGTCTCACGCTAATTTCGGCGTGCTATCAACTCTCGGTGCTGAGAAA
CATGCCTTGCTTGCGACTTGAAGCCGGTCCCGATCGGTGCTCCTTCCCCA
CTTTACATCTAGATGTAATACGTGTGCATGCGAACTCAAGACGTATACAT
TGCACGAACAACTCATCGTCGCGTTAGCCGTAGCGTCTCGGATGCCGCTG
CCAAGACTCACGCATGTTACTCCTCCCTAAGAGCTTCTTATCAAAGCTAA
GCACGTCCGAACTCAATCTGCACCCCGGTCGAGCGTGTAAGACGAAACTC
CCGACGCCCGCAGGAGGCGGCAGAATCTGCGCGGGAGGGGACAAGAGGAC
GCGCCGGGCTCGGCAGAAGGGCAGGCCCGAGAGATGAATCAGTCGTTGAA
GCGAACGCGCAAGATGATGGCAGAGCAGCTCGCGAGAGTAGCGCAAGTGT
CGGAAGTCATGGGCGAGCAGGACGTCTTGCTCAGGGATACATTTACGGAG
CACCAGGCAAGGCGTTGTATATGTAGGCAAGGCGTTACTTGCACGCCGTT
AGCGTGAACGAACGTTCAACTTCGAACGCAGGCTTTTTCTTTAGGTTCAG
CAATCTGCTATGCCGCAGAAGGTGGGAGGGTCCCCGGTATCGAAGTAATT
GATGGACGAAATGGAAGTAAAATCAAGCATCGTGGTAGGTTAGATAATAT
GAGAGCACCAGGAAAATTGTCCACCAGCGAGTACGGCTAAAAGTTGGCTG
TAGCTGGCGCCGTTGTATTCTGGCGAATCATCGTCCTCCTTGGCGATCGC
TATGGCTGTACGCTTCTTCCTCGGCACAAACCACGTTGAGTGTTCTCTAG
GCTGTACGGCAACTGGTCGCAGCTGCATCGAATTGACGAACTTCTGCGTA
AAGTAGTCATTGGCCATTGAATCTGGCGGACGGACACATCGCTCATGACT
GACTGACAAGAGAACCCCGGGGTTTCGACAAGAGAACCCTGGGTTTGCCT
TATGTCTCAGCTGTTTTCAAGACAGTAATTCATCGCCCGGTTCGCCCCAC
ACCTCTTTCCTGTTGTTATTGCAATGCCGTCGACCTTATCACCATGTATC
TCGCGATGTGGTGCTCTCAGGGAATTGGGGGGAGCCTGCGGCGCGCGGGC
ACGACATTGACTCGTCTCAGCACGGCGGACGTCATGGACAAGGTTGTGAT
GGTGGCGTCGACGATGTTTTTTTTTTCCACAGTGTGCTTCATCTTGTATC
AGAGGTTGCCCATGCTTGGGCTGCTATGGCCATTTTAACATCGTAGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig815:89142..99838+

>mRNA_F-serratus_M_contig815.19566.1 ID=mRNA_F-serratus_M_contig815.19566.1|Name=mRNA_F-serratus_M_contig815.19566.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig815:89142..99838+ (Fucus serratus male)
ATGGGAGGATCCCCTCTCTCACTTTCCCTCGCCCATGACCTCTTACGAGA
ACTCAGGCAAGGGACGCGTAGAATAGAGGTGGTGAATTCGTCTGGAAGAC
GGATCAATGACGATTCCTGGACAAAAGATGCAATTGAGATGGGAGGATCC
CCTCTCTCACTTTCCCTCGCCCATGACCTCTTACGAGAACTCAGGCAAGG
GACGCGTAGAATAGAGGTGGTGAATTCGTCTGGAAGACGGATCAATGACG
ATTCCTGGACAAAAGATGCAATTGAGACCTTCAACAACTGGAGCATTCGG
ACGGTTGCCTCCTGTCGCGATGCGCTGGTTTCCGCGAGATTCGAGGCGAA
CAAACTATTTTTGGAACGAACCTTCAACAACTGGAGCATTCGGACGGTTG
CCTCCTGTCGCGATGCGCTGGTTTCCGCGAGATTCGAGGCGAACAAACTA
TTTTTGGAACGAGGAAGAGGTGGGCCCAAAGGGGGAAGCGCCGAGGTGGC
CACAGCACCGGGAAGAGGTGGGCCCAAAGGGGGAAGCGCCGAGGTGGCCA
CAGCACCGGTTTTACAAGCCGAGAGGGATCTGGAGCACGTCAGGAGCGAG
CTGCGACGAGCGATCATCGCGCGCAAGCGAAGGGAAGAGCGGCGGCAGAC
CTCCAACGGTCGCGCCGCCCTCCTAGGAACCGGGGCCGCGAACAACGGTG
TAACGTTTTACAAGCCGAGAGGGATCTGGAGCACGTCAGGAGCGAGCTGC
GACGAGCGATCATCGCGCGCAAGCGAAGGGAAGAGCGGCGGCAGACCTCC
AACGGTCGCGCCGCCCTCCTAGGAACCGGGGCCGCGAACAACGGTGTAAC
GAGGCGGCAGAATCTGCGCGGGAGGGGACAAGAGGACGCGCCGGGCTCGG
CAGAAGGGCAGGCCCGAGAGATGAATCAGTCGTTGAAGCGAACGCGCAAG
ATGATGGCAGAGCAGCTCGCGAGAGTAGCGCAAGTGTCGGAAGTCATGGG
CGAGCAGGACGTCTTGCTCAGGGATACATTTACGGAGCACCAGGCAAGGC
GTTGTATATGTAGGCAAGGCGAGGCGGCAGAATCTGCGCGGGAGGGGACA
AGAGGACGCGCCGGGCTCGGCAGAAGGGCAGGCCCGAGAGATGAATCAGT
CGTTGAAGCGAACGCGCAAGATGATGGCAGAGCAGCTCGCGAGAGTAGCG
CAAGTGTCGGAAGTCATGGGCGAGCAGGACGTCTTGCTCAGGGATACATT
TACGGAGCACCAGGCAAGGCGTTGTATATGTAGGCAAGGCGGAATTGGGG
GGAGCCTGCGGCGCGCGGGCACGACATTGACTCGTCTCAGCACGGCGGAC
GTCATGGACAAGGTTGTGATGGTGGCGTCGACGATGTTTTTTTTTTCCAC
AGTGTGCTTCATCTTGTATCAGAGGTTGCCCATGCTTGGGCTGCTATGGC
CATTTTAAGGAATTGGGGGGAGCCTGCGGCGCGCGGGCACGACATTGACT
CGTCTCAGCACGGCGGACGTCATGGACAAGGTTGTGATGGTGGCGTCGAC
GATGTTTTTTTTTTCCACAGTGTGCTTCATCTTGTATCAGAGGTTGCCCA
TGCTTGGGCTGCTATGGCCATTTTAA
back to top