mRNA_F-serratus_M_contig813.19543.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: D7FT86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT86_ECTSI) HSP 1 Score: 376 bits (965), Expect = 3.330e-128 Identity = 180/229 (78.60%), Postives = 198/229 (86.46%), Query Frame = 1
Query: 1 VSDKAVREAIERKSVELWRRKLLRQMLRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVLFGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMWA 687
V +K +A E K+V+ WRRK L++MLRSELGF+TVVKDST+ GAGLGLF+EGSAP GAVVAIYPG V+LPEHLR KYA SLLPDE HFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPP G+ ANVLQVAY+FPAL E DVGIA+GGRFPERLRPLVPNRYHR PK LFGGKLD SA+VETVVLVA +GGL D+EV MDYRFNPNM HPDWY+PVD + MWA
Sbjct: 135 VEEKKTEKAAEGKAVKRWRRKHLKEMLRSELGFNTVVKDSTLSGAGLGLFVEGSAPEGAVVAIYPGLVHLPEHLRSQKYAASLLPDEDHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPEGQAANVLQVAYDFPALSEDDVGIAKGGRFPERLRPLVPNRYHRAPKALFGGKLDQSAMVETVVLVACRGGLHDQEVFMDYRFNPNMRHPDWYSPVDPEATAEMWA 363
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: W4GU79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GU79_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.920e-41 Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 1
Query: 67 LRQMLRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVL--FGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMWA 687
L +++R ELG+S V+DS+IPGAG GLF+EG A AG +A+YPG VYL EH R KY + F R DG ++D + ++PL A NHPP NV+ +AY+FP + L+PNR+ PP +L FG + ALV ++VLVA + DEEV ++YR+NPNM +P WYTPV++ NMW+
Sbjct: 121 LDEIVRRELGYSLHVRDSSIPGAGRGLFLEGRATAGTAIALYPGTVYLSEHYRK-KYLHVV--SNNPFARARFDGAIIDATGEAIPHANPLALAQLVNHPPPDTMPNVIPMAYDFPPADPFQT---------DPHHALIPNRFVHPPSMLAMFGKR----ALVHSLVLVALTD-IEDEEVFLNYRYNPNMEYPPWYTPVNRDEDLNMWS 312
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: A0A024UXH6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UXH6_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.810e-41 Identity = 86/206 (41.75%), Postives = 120/206 (58.25%), Query Frame = 1
Query: 76 MLRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVL--FGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMWA 687
++R ELG+S V+DSTIPGAG GLF+EG A AG +A+YPG VYL EH R K M ++ + F R DG ++D + ++PL A NHPP NV+ +A++FP E L+PN + PP +L FG + ALV ++VLVA + DEEV ++YR+NPNM +P WYTPV+++ NMW+
Sbjct: 124 IVRRELGYSLQVRDSTIPGAGRGLFVEGRATAGTAIALYPGTVYLSEHYR--KKYMHVVSNNP-FARARFDGAIIDATNEAVPHTNPLALAQMVNHPPQDTLPNVIPMAFDFPPEDPFQS---------EPYHSLIPNHFVHPPSMLAMFGKR----ALVHSLVLVALTD-IEDEEVFLNYRYNPNMEYPPWYTPVNREEDLNMWS 312
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: A0A835ZBE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE7_9STRA) HSP 1 Score: 150 bits (379), Expect = 5.580e-41 Identity = 81/184 (44.02%), Postives = 116/184 (63.04%), Query Frame = 1
Query: 64 LLRQMLRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVLFGGKLDLSALVETVVLVASKGGLRDEEVLMDYR 615
LL++ LR+ LG+S +K S + GAGLGL++EG AP G+V+ ++ G VY P+++R +Y L PD+ L+ R D ++DGR PL A ANHPP GR NV+QVAY++P S R +P LRP VPN+Y P +GGK+D + ++E++VLVA+ L+DEEV M+YR
Sbjct: 106 LLQRELRATLGYSVALKPSRLKGAGLGLWVEGYAPTGSVIGLFSGLVYAPQYVRRPEYQAELFPDDNMQLIMRYDNYIIDGRKTQGCNWHPLGVASMANHPPEGRLPNVMQVAYDYPTEVGSTAATTRT-TYPAELRPYVPNQYRAVP-TFWGGKIDSTVMMESMVLVATTD-LQDEEVFMNYR 286
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: W7TPU3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPU3_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.420e-40 Identity = 97/232 (41.81%), Postives = 129/232 (55.60%), Query Frame = 1
Query: 1 VSDKAVREAIERKSVELWRRKLLRQMLRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVLFGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPH---PDWYTPVDQKGAGNMWA 687
+S + RE +E + E RR + + LR +LGF+ S+I AG G+F+EG A G++V IYPG VYLPEHLR + L PD FL R D +VDGR A +P + AH NH G+ NV+ VAY+FP + +G G FP LRP +PN + RP +L G D SAL+++VVLVA+ EE+ ++YR NP P WY PVD K WA
Sbjct: 136 ISRRGEREDME-SARESARRGRVFKSLRQDLGFTLCHGPSSILSAGRGVFLEGRARIGSLVGIYPGLVYLPEHLRKAEEVAELFPDPDIFLFQRYDKIVVDGRAAEKMPHNEYALAHLCNH---GKP-NVMAVAYDFP---QDPLGW---GGFPHELRPYIPNAFARPRSLL--GSPDQSALIQSVVLVATTDLEDGEELFLNYRLNPKHGSESLPPWYVPVDAKEDQRRWA 354
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: A0A485L2C1_9STRA (Aste57867_14760 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2C1_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.170e-39 Identity = 85/205 (41.46%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 79 LRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVL--FGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMWA 687
+R ELG+S V+DSTIPGAG GLF++G APAG +A YPG VYL EH R KY + F R DG ++D A + +P A NHPPA NV+ +A++FP E E +PNR+ PP +L +G + +LV ++VLVA ++DEEV ++YR+NP+M +PDWYTPV++ MW+
Sbjct: 125 VRQELGYSLSVRDSTIPGAGRGLFLDGHAPAGTAIAFYPGTVYLSEHYRK-KYLHVV--SNNPFARARFDGAIIDASEAAIPHVNPFALAQMINHPPAETMPNVIPMAFDFPP--EEPFTS-------EPHHSFIPNRFVHPPSMLAMYGKR----SLVHSLVLVALND-IQDEEVFLNYRYNPSMEYPDWYTPVNRDEDLKMWS 312
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: A0A7S2WW23_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW23_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.110e-37 Identity = 85/225 (37.78%), Postives = 112/225 (49.78%), Query Frame = 1
Query: 91 LGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLL-PDEQHFLMGRADGCLVDGRTAGLLPSSP--------------------------LTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVLFGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMW 684
LGF V++S+I GAG GLF++G AG V+A+YPG V LP H+ L PD+ HFL R DG L+D R A P +P H +NHPPAG N + V Y+F ES + A E L L+PN Y RPP L G + ++++V+L+A++ L DEEVL DYR +PN P WY PVD + W
Sbjct: 118 LGFHVAVQESSIAGAGRGLFLKGRTKAGTVIALYPGTVLLPGHIMQIPNVFDFLYPDDGHFLFSRYDGALIDARGAAQPPLAPDEDAFRRHLHSHLFSEPMPTPARDNIFGVGHLSNHPPAGSAPNAMMVGYDF----ESSMFRASADDA-ESLASLIPNAYFRPPS-LIRGTYSPTVMMQSVILLATRD-LEDEEVLTDYRLSPNQERPAWYAPVDSEEELRRW 335
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: A0A6G0XH50_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XH50_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.480e-36 Identity = 81/209 (38.76%), Postives = 114/209 (54.55%), Query Frame = 1
Query: 67 LRQMLRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVL--FGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMWA 687
L + +R ELG+S V++STIP AG GLF++G APAG VA +PG VYL EH R KY + + R DG ++D + + A NHPP NV+ +A++FP E + +PNR+ PP +L +G + ALV +VLVA ++DEEV ++YR+NPNM +P WYTPV+Q MW+
Sbjct: 120 LEEFIRQELGYSLSVRNSTIPDAGRGLFLDGHAPAGTAVAFFPGTVYLSEHYRK-KYLHVV--SNNPYARARFDGAIIDATGEDIPHKNHFALAQMVNHPPPQSTPNVIPMAFDFPPEEPFTT---------EPFKSFIPNRFIHPPSMLAMYGKR----ALVHGLVLVALND-IQDEEVFLNYRYNPNMEYPAWYTPVNQDEDLKMWS 311
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: A0A067C2W7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2W7_SAPPC) HSP 1 Score: 138 bits (347), Expect = 5.790e-36 Identity = 78/205 (38.05%), Postives = 113/205 (55.12%), Query Frame = 1
Query: 79 LRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKV--LFGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMWA 687
++ +GFS V+DSTI AG GLF++G+A AG +VA+YPG VYL EH R + + F R DG +++ + + ++ A NHPPAG NVL VA++FPA E A P +PNRY P + +FG + LV + LV + DEE+ ++YR+NP++P+P+WYTPVD+ MW
Sbjct: 124 VQDHVGFSLQVQDSTIDNAGRGLFLQGTAVAGTLVALYPGTVYLSEHYRKKYFDVV---SNNPFARARFDGAIINAKDQVIPHANHYALAQMVNHPPAGTSPNVLPVAFDFPAA-EPFTSDA--------FAPYIPNRYVEQPSLFAMFGKR----GLVPGIALVTLHD-VTDEELFLNYRYNPSLPYPEWYTPVDKDADEKMWG 311
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Match: A0A1V9YV75_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YV75_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.270e-35 Identity = 74/209 (35.41%), Postives = 117/209 (55.98%), Query Frame = 1
Query: 61 KLLRQMLRSELGFSTVVKDSTIPGAGLGLFIEGSAPAGAVVAIYPGFVYLPEHLRDDKYAMSLLPDEQHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPAGRGANVLQVAYNFPALGESDVGIARGGRFPERLRPLVPNRYHRPPKVLFGGKLDLSALVETVVLVASKGGLRDEEVLMDYRFNPNMPHPDWYTPVDQKGAGNMWA 687
K + + ++ +GFS V +S+IP AG GLF++GSA AG VVA+YPG V+L EH R + + + R DG +++ + + ++ A NHPP+G NVL +A++FP L E E +PN+Y P +L G L + + + LVA + DEE++++YR+NP++P+P WYTPVD++ MW+
Sbjct: 117 KSIEEYVQDRIGFSLKVGESSIPDAGRGLFLQGSALAGTVVALYPGTVFLSEHYRKKYFDVV---SNNPYARARFDGAIINAKDEAIPHANHFALAQLVNHPPSGTLPNVLPMAFDFPNL-EPFTN--------EEFAKYIPNKYIEQPSLLAMGN-QLKSSCKGLALVALYD-IHDEELMLNYRYNPSLPYPSWYTPVDKEADEKMWS 311 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig813.19543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig813.19543.1 >prot_F-serratus_M_contig813.19543.1 ID=prot_F-serratus_M_contig813.19543.1|Name=mRNA_F-serratus_M_contig813.19543.1|organism=Fucus serratus male|type=polypeptide|length=229bp VSDKAVREAIERKSVELWRRKLLRQMLRSELGFSTVVKDSTIPGAGLGLFback to top mRNA from alignment at F-serratus_M_contig813:209556..211203+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig813.19543.1 ID=mRNA_F-serratus_M_contig813.19543.1|Name=mRNA_F-serratus_M_contig813.19543.1|organism=Fucus serratus male|type=mRNA|length=1648bp|location=Sequence derived from alignment at F-serratus_M_contig813:209556..211203+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig813:209556..211203+ >mRNA_F-serratus_M_contig813.19543.1 ID=mRNA_F-serratus_M_contig813.19543.1|Name=mRNA_F-serratus_M_contig813.19543.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig813:209556..211203+ (Fucus serratus male)back to top |