mRNA_F-serratus_M_contig813.19536.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A6V1QFZ2_HETAK (Cilia- and flagella-associated protein 36 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFZ2_HETAK) HSP 1 Score: 134 bits (338), Expect = 1.760e-34 Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 2
Query: 287 LVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAE 619
+V+KV FFYE ++F +FE FV++NAH ID +DE KLEYTDLY +YQKLFE ++E FIE+QG +V++FY VR+A+E DP S AV GRIM +T DFD+F+ MM+E E
Sbjct: 31 IVEKVQEFFYEDDEFAAVFEKFVEENAHTIDLDSDENKLEYTDLYNEYQKLFESQLEGFIESQGSSVLEFYSEVRKANEEDPDSATAVLGRIMASTCDFDVFLYMMKEEKE 141
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: D7G9D1_ECTSI (ARL2_Bind_BART domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D1_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.470e-30 Identity = 61/88 (69.32%), Postives = 70/88 (79.55%), Query Frame = 2
Query: 194 MRPGPNVDEWGGSEWVEMTPEEVKREAELGELVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIE 457
M+PG DEWGGS W E TPEE KRE L +LVKKVSS FYESEDF+++FE FV+ NAHKID +EMKLEYTDLY DYQ LFE++IE
Sbjct: 1 MKPGKEPDEWGGSVWEEKTPEESKREDGLEDLVKKVSSLFYESEDFIKVFEDFVETNAHKIDLDVEEMKLEYTDLYDDYQALFEKKIE 88
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A7S2V171_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V171_9STRA) HSP 1 Score: 122 bits (307), Expect = 5.230e-30 Identity = 59/113 (52.21%), Postives = 86/113 (76.11%), Query Frame = 2
Query: 287 LVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAEAE 625
+V+KV +FYE +DF +IFE FV ++AH +D T+E +LEYT+LYQ +Q L+E+ +E FI QG +VM+FY+++++A + D S A+FG+I+TAT DFDIFM MM+EA E E
Sbjct: 35 IVEKVQQYFYEDDDFAKIFEDFVAEHAHIVDLDTEENRLEYTELYQQFQALYEKHLEAFIVEQGSSVMEFYQQLKKATDEDQTSAIALFGQILTATCDFDIFMLMMKEAREKE 147
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A067CE96_SAPPC (Cilia- and flagella-associated protein 36 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CE96_SAPPC) HSP 1 Score: 114 bits (285), Expect = 8.750e-27 Identity = 54/116 (46.55%), Postives = 83/116 (71.55%), Query Frame = 2
Query: 287 LVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAEAEKHK 634
+V KV +FF+E+++F FE F + D DEM+LEYTD+Y + KLFE +IE+FIE+QG +V +FY+ VR+AHE+DP A++ R++ AT+DFD+F+ MM++ EA++ K
Sbjct: 41 IVDKVIAFFFENDEFCATFERFADKHCDIFDPDADEMQLEYTDVYNQFTKLFETKIEEFIESQGSSVAEFYDLVRKAHEKDPHGTIAIYSRMLVATSDFDVFVLMMKQTKEAQRLK 156
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A024U863_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U863_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.180e-26 Identity = 54/112 (48.21%), Postives = 80/112 (71.43%), Query Frame = 2
Query: 287 LVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAEA 622
+V +V +FF+E+EDF +FE F + D +DEM+LEYTD+Y+ + LFE +IE FIE+QG TV DFY V++AH++DP A++ R++ AT DFD+F+ MM++A EA
Sbjct: 57 IVDRVIAFFFENEDFCRVFERFADKHCDIFDVKSDEMQLEYTDIYKKFTDLFESKIEAFIESQGSTVDDFYTLVKKAHDKDPHGTIAIYSRMLVATTDFDVFVIMMKQAKEA 168
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A6G0XJ32_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ32_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.070e-25 Identity = 51/112 (45.54%), Postives = 81/112 (72.32%), Query Frame = 2
Query: 287 LVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAEA 622
++ +V FF+E+EDF + +HF ++ D ++EM+LEYTDLYQ + KLFE +IE+FIEAQG +V +FY+ V++AH++DP A + R++ AT DF +F+ MM++A +A
Sbjct: 32 IIDRVVGFFFENEDFCKALDHFADNHCDIFDVESEEMQLEYTDLYQQFTKLFEDKIEEFIEAQGSSVKEFYKLVKKAHDKDPHGTIATYSRMLVATTDFAVFVLMMKQAKQA 143
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A2P4Y0G2_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0G2_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.170e-25 Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 2
Query: 275 ELGELVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAEA 622
E +LV KV SFF+++++F FE F + + H D +DEMKLEYTD+Y ++ LFE+++E FI +QG TV +FYE VR A+E D S + I+ ATADFD+F+ MMR+ EA
Sbjct: 46 ENNDLVNKVISFFFDNDEFAHTFEAFAEHHCHAFDLDSDEMKLEYTDIYNEFLALFEQKLEAFIRSQGATVQEFYELVRRAYEIDRQSGTVLCSEILVATADFDVFVLMMRQTKEA 161
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A3F2RJK5_9STRA (Cilia- and flagella-associated protein 36 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJK5_9STRA) HSP 1 Score: 109 bits (272), Expect = 9.360e-25 Identity = 51/112 (45.54%), Postives = 80/112 (71.43%), Query Frame = 2
Query: 284 ELVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAE 619
+LV KV ++F+++++F FE F ++N H D ++EMKLEYTD+Y ++ LFER++E +I++QG TV +FYE VR+A++ D S + I+ ATADFD+F+ MMR+ E
Sbjct: 53 DLVNKVITYFFDNDEFAHTFETFAEENCHAFDLDSEEMKLEYTDIYNEFLALFERKLEGYIKSQGSTVHEFYELVRQAYQTDRESGTVLCSEILVATADFDVFVLMMRQTKE 164
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: G4ZTS8_PHYSP (Cilia- and flagella-associated protein 36 n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZTS8_PHYSP) HSP 1 Score: 108 bits (271), Expect = 1.130e-24 Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = 2
Query: 284 ELVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAEA 622
+LV KV SFF+++++F FE F + + H D +DEMKLEYTD+Y ++ LFE ++E +I +QG TV +FYE VR A+E D S + I+ ATADFD+F+ MMR+ EA
Sbjct: 48 DLVNKVISFFFDNDEFAHTFETFAETHCHAFDLDSDEMKLEYTDIYNEFLALFEEKLEAYIRSQGATVHEFYELVRRAYELDRQSGTVLCSEILVATADFDVFVLMMRQTKEA 160
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Match: A0A225W6K4_9STRA (Cilia- and flagella-associated protein 36 n=2 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6K4_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.300e-24 Identity = 55/118 (46.61%), Postives = 82/118 (69.49%), Query Frame = 2
Query: 269 EAELGELVKKVSSFFYESEDFVEIFEHFVKDNAHKIDATTDEMKLEYTDLYQDYQKLFEREIEDFIEAQGHTVMDFYERVREAHERDPWSHEAVFGRIMTATADFDIFMNMMREAAEA 622
++E +LV KV SFF+++++F FE F + + H D ++EMKLEYTD+Y ++ LFE+++E FI +QG TV +FYE VR+A+E D S + I+ ATADFD+F+ MMR+ EA
Sbjct: 48 DSEDDDLVNKVISFFFDNDEFAHTFETFAEHHCHAFDLDSEEMKLEYTDIYNEFLALFEQKLEAFILSQGATVQEFYELVRKAYEVDRESGTVLCSEILVATADFDVFVLMMRQTKEA 165 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig813.19536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig813.19536.1 >prot_F-serratus_M_contig813.19536.1 ID=prot_F-serratus_M_contig813.19536.1|Name=mRNA_F-serratus_M_contig813.19536.1|organism=Fucus serratus male|type=polypeptide|length=164bp MRPGPNVDEWGGSEWVEMTPEEVKREAELGELVKKVSSFFYESEDFVEIFback to top mRNA from alignment at F-serratus_M_contig813:126638..129754- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig813.19536.1 ID=mRNA_F-serratus_M_contig813.19536.1|Name=mRNA_F-serratus_M_contig813.19536.1|organism=Fucus serratus male|type=mRNA|length=3117bp|location=Sequence derived from alignment at F-serratus_M_contig813:126638..129754- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig813:126638..129754- >mRNA_F-serratus_M_contig813.19536.1 ID=mRNA_F-serratus_M_contig813.19536.1|Name=mRNA_F-serratus_M_contig813.19536.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig813:126638..129754- (Fucus serratus male)back to top |