mRNA_F-serratus_M_contig810.19515.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: A0A6H5L3M0_9PHAE (PKD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 145 bits (365), Expect = 2.150e-38 Identity = 58/103 (56.31%), Postives = 79/103 (76.70%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFTVEINGQRQRFNN 311
E+YTS+APYDPLFWV+HP+++RFL+WRR LA PD WALDET V+GETG++CDW+GV ++ LDMP+CV+G CGGH D+LPF +++ G+ + N
Sbjct: 527 ELYTSSAPYDPLFWVIHPTAERFLSWRRKLATERPDVWALDETWGYSHGHVVGETGVVCDWSGVGDDFLDMPSCVRGICGGHGVDDMLPFEIKVKGETVKMTN 629
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: D7G0J8_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 140 bits (354), Expect = 8.730e-37 Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFTVEINGQRQRFNNA 314
EMYTSAAPYDPLFWV+HP++DR LAWRRML R + W DET V+GETG +C+W V DMP CVKG CGGH E D+LPF+V+ING+ + NA
Sbjct: 523 EMYTSAAPYDPLFWVIHPTADRLLAWRRMLGRQGAEGWDFDETWGYAHSSVVGETGTVCNWDDVVPGSGDMPTCVKGICGGHNEDDLLPFSVKINGEVMKLTNA 626
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: D7FSP4_ECTSI (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 136 bits (343), Expect = 2.690e-35 Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFTVEINGQRQRFNNA 314
E+Y+S+APYDPLFWV+HP+++RF+ W+R LAR PD E V+GETGM+CDW+GV + LDMP CVKG CGGH D+LPF V+I G+ ++ NA
Sbjct: 550 ELYSSSAPYDPLFWVIHPTAERFMGWKRKLARERPDVHPFSEDWGYTHGNVVGETGMVCDWSGVRQGTLDMPTCVKGICGGHSAGDLLPFKVKIGGEVRKMTNA 653
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: D7G0J9_ECTSI (PKD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 136 bits (342), Expect = 3.440e-35 Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFTVEINGQRQRFNN 311
E+YTS+APYDPLFWV+HP+++RF+ WRR L PD W LDET V+GETG +CDW V E LDMP C KG CGGH D+LPF V++ G+ + N
Sbjct: 532 ELYTSSAPYDPLFWVIHPTAERFMGWRRKLGVEQPDMWPLDETWDYSHGWVVGETGTVCDWDDVREGSLDMPTCRKGICGGHGADDLLPFKVKVKGETMQMTN 634
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: A0A6H5LKB4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 134 bits (337), Expect = 1.600e-34 Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFTVEINGQRQRFNNA 314
EM+TSAAPYDP+FWVVHP++DR LAWRRML R + W DET V+GETG +C+W V DMP C+ G CGGH E D+LPFTV++ G+ + NA
Sbjct: 523 EMFTSAAPYDPVFWVVHPTADRLLAWRRMLGRQGVEGWDFDETWGYTHTSVVGETGTVCNWDDVVPGSGDMPTCITGICGGHNEDDLLPFTVKVKGENVQLTNA 626
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: A0A7S2CY94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY94_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.070e-20 Identity = 46/118 (38.98%), Postives = 63/118 (53.39%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGET-----GMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLP---------FTVEINGQRQRFNNA 314
EM+TSAAPYDP FW +H ++DRFL+W+R+L + W DE+ G T G +CDWT V + D+PNC K C GH F+ +P F G R+++ NA
Sbjct: 63 EMFTSAAPYDPTFWPIHTTADRFLSWKRILRANGLIDW--DESWAYVHDMAPGMTPASDAGQVCDWTAVRDGLFDLPNCSKQICPGHLPFEEIPWEKFPGDKKFDSVTKGARKKYTNA 178
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: A0A7S2CMM8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMM8_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.580e-19 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVI-GETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPF 272
EMYTSAAP DPLFW +H +D+F+ +R++ LDE+ + +TG++CDW+GV MPNC K TC GHKEFD++PF
Sbjct: 91 EMYTSAAPLDPLFWPLHGLADKFINMKRLMKD--AKKTVLDESWGFTHLHQVPSDTGVVCDWSGVTGE-FQMPNCTKKTCPGHKEFDIIPF 178
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: A0A7S2CGQ1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGQ1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.870e-19 Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFTVEINGQRQRFNN 311
EMYTSAAPYDP FWV+H +++R L +RRM A D LDET + G++CDW+ V+ G +P C C GH D LPF+ + G + ++N
Sbjct: 510 EMYTSAAPYDPTFWVLHTAAERLLQYRRMQA----DVSPLDETWGFAHMNAASDVGVVCDWSSVENGGDSLPTCTAKLCEGHGATDTLPFS-DFLGHGETYSN 607
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: F0YJP7_AURAN (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJP7_AURAN) HSP 1 Score: 91.3 bits (225), Expect = 2.950e-19 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 3
Query: 3 EMYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXXVIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFT 275
+ ++SAA DP+FWV+HP +DRF+A+RR+L + LDET + +T CDW VD +P C GTC GHKE D+LPFT
Sbjct: 526 DSFSSAASQDPIFWVLHPLADRFIAYRRLLT--HEGLMTLDETWDYDHARIASDTHSTCDWADVDAGLSLLPTCTPGTCAGHKEDDLLPFT 614
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Match: A0A7S2AZU9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZU9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 8.140e-19 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 3
Query: 6 MYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETXXXXXXX-VIGETGMLCDWTGVDENGLDMPNCVKGTCGGHKEFDVLPFTVEINGQRQRFNNA 314
M+TSAAPYDP+FW +H +DRFL +RM+A T DET +T +CDW+GV+ G+ +P C +G+C GHK D++P++ + + + N
Sbjct: 1 MFTSAAPYDPVFWPIHGLADRFLQLKRMMADD--GTTTFDETWGYVHSGNTPSDTNHVCDWSGVE--GMQLPTCTEGSCSGHKSNDIIPWS-NFQNKNETYTNV 99 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig810.19515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig810.19515.1 >prot_F-serratus_M_contig810.19515.1 ID=prot_F-serratus_M_contig810.19515.1|Name=mRNA_F-serratus_M_contig810.19515.1|organism=Fucus serratus male|type=polypeptide|length=103bp MYTSAAPYDPLFWVVHPSSDRFLAWRRMLARHYPDTWALDETWGYEKTWVback to top mRNA from alignment at F-serratus_M_contig810:228014..229569- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig810.19515.1 ID=mRNA_F-serratus_M_contig810.19515.1|Name=mRNA_F-serratus_M_contig810.19515.1|organism=Fucus serratus male|type=mRNA|length=1556bp|location=Sequence derived from alignment at F-serratus_M_contig810:228014..229569- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig810:228014..229569- >mRNA_F-serratus_M_contig810.19515.1 ID=mRNA_F-serratus_M_contig810.19515.1|Name=mRNA_F-serratus_M_contig810.19515.1|organism=Fucus serratus male|type=CDS|length=618bp|location=Sequence derived from alignment at F-serratus_M_contig810:228014..229569- (Fucus serratus male)back to top |