mRNA_F-serratus_M_contig81.19511.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig81.19511.1
Unique NamemRNA_F-serratus_M_contig81.19511.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A6H5JMI1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI1_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 4.230e-76
Identity = 124/191 (64.92%), Postives = 150/191 (78.53%), Query Frame = 1
Query:    1 MAFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIEN--NPLSLDVIQSLMNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKM-RGPRERYANTITAMHEHGWRDQLDFNRQMRHGKNSCPETLYASELVKSGIYF 564
            MAFFGLTALGPQ+SF++SL+D SYL VF+  D++KAF   D+  RGH+   +QVE FL ELY G PKACDLARF EK + S E   N ++LD IQS M QL+KEVE+E N+ KW +GSGSD SSN+ FREK+R HE + RGPRERYA T+TA+ EHGW+DQLD N+QM HGK SC ET+YASELVKSG+YF
Sbjct:    1 MAFFGLTALGPQNSFQVSLLDFSYLDVFTALDIEKAFNIVDQEKRGHIHS-DQVEAFLTELYHGKPKACDLARFMEK-KSSFEGQENRVTLDDIQSTMTQLRKEVEEETNQAKWHKGSGSDLSSNQNFREKVRRHEYIARGPRERYARTVTAVQEHGWQDQLDINKQMVHGKKSCAETVYASELVKSGVYF 189          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A7S2V2Y5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.110e-35
Identity = 76/189 (40.21%), Postives = 121/189 (64.02%), Query Frame = 1
Query:    1 MAFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIENNPLSLDVIQSLMNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMR-GPRERYANTITAMHEHGWRDQLDFNRQMRHGKNSCPETLYASELVKSGIYF 564
            MAFFGLT+LGPQDSF  SL+D+  L +FSD+D + AFK  D++  G ++ +E +E  L E+Y+G     ++  F  K  ++ ++  +S +   S + +L++EVE++    + + G  S FSSN  +RE M  H ++  GP ++Y   +TA  E+GW+ + + ++  R GK SC ETLYA+ELVKSG+Y+
Sbjct:    1 MAFFGLTSLGPQDSFATSLLDTINLNIFSDEDFETAFKKVDRDGSGFIERNE-IEALLREVYRGDCPRNEVEMFMAKF-DTNQDGKISWEEFVSTLCELRQEVEEQEKAKEQRVGPASQFSSNLEYRENMHKHTRLNTGPTDKYNQPMTASQEYGWQHK-EVDQAPRAGKKSCEETLYAAELVKSGMYY 186          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: D8LF25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF25_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.360e-25
Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 1
Query:    1 MAFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIEN--NPLSLDVIQSLMNQLKKEV 309
            MAFFGLTALGPQ+SF+++L+D SYL VF+  D++KAF   D   RG++   +QVE FL ELY G P ACDLARF EK ++S+E   N ++LD IQS M QL+KE 
Sbjct:    1 MAFFGLTALGPQNSFQVALLDFSYLDVFTALDMEKAFNIVDHQKRGYIHS-DQVEAFLTELYHGKPIACDLARFMEK-KKSLEGQENRVTLDDIQSTMAQLRKEA 103          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A836CBM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 6.010e-24
Identity = 70/193 (36.27%), Postives = 110/193 (56.99%), Query Frame = 1
Query:    1 MAFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIENNPLSLDVIQSL--MNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMR-GPRERYANTITAMHEHGWRDQLDFNRQMR--HGKNSCPETLYASELVKSGIYF 564
            MAFFGLTALGPQ++F  SL  +S LQ+FSD+D + AF+A    + G L   + V   L  LY+G     D ARF++ A  ++ +   +L   Q L  + QL+ ++ + + +  W+  +    +SNE +R ++R H  +   P+E+YA  + A  + GW+ +          H K SC ET +A+E+VKSG+YF
Sbjct:    1 MAFFGLTALGPQNTFACSLKGASDLQIFSDEDWRLAFEAV--AVEGAL-RRDDVTALLEALYRGPAPVDDAARFAKAAEAALGSGWDALACAQILRAVQQLRADMAQLQADEAWRARASCGTTSNEEYRNRVRRHCGLHLAPQEQYAVPLKAAQDLGWQQRPPGEGAAAGAHSKKSCEETKFAAEMVKSGMYF 190          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A7S2TRH2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRH2_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 1.780e-19
Identity = 59/190 (31.05%), Postives = 105/190 (55.26%), Query Frame = 1
Query:    4 AFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIENNPLSLDVIQSLMNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMRGPRERYANTITAMHEHGWR--DQLDFNRQMRH-GKNSCPETLYASELVKSGIYF 564
            +FFGL ALGP D F  +L+ +  +  F++++ +KAFK+ DK+  G++ I E V   L  LY       +  +   K  +  ++  ++ +  +  + +LK +V+KE   N     + +  S   ++R + ++    RGP++ YA  +T   E GW+   + + N+   H  KNSC ET++ASE++KSGIY+
Sbjct:    8 SFFGLVALGPNDPFSHNLLKNMNMSKFTEEEFEKAFKSIDKDGNGYISIDE-VRYLLTSLYSMKNPPEEEVKMFVKFFDKNKDGKITYEEFKEAVPKLKGKVQKETKVNH----ATTTNSVESLYRVRNKHKRNCRGPQQLYAAPMTTAQEVGWQTASKAEKNKNDPHMPKNSCEETVFASEMIKSGIYY 192          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A7S4DF25_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DF25_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 2.950e-17
Identity = 57/192 (29.69%), Postives = 107/192 (55.73%), Query Frame = 1
Query:    4 AFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIENNPLSLDVIQSLMNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMRGPRERYANTITAMHEHGWR-----DQLDFNRQMRHGKNSCPETLYASELVKSGIYF 564
            +FFGL ALGP D F  +L+ +  +  F++++ +KAFK+ DK+  G++ I E V   L  LY       +  +   +  ++ ++  ++ +  ++ + +LK++V KE   N  K  +    S+  + R + ++    R P++ YA  +T   E GW+     ++ + + QM   K+SC ET++ASE++KSGIY+
Sbjct:   25 SFFGLVALGPNDPFSHNLLKNMNMSKFTEEEFEKAFKSIDKDGNGYISIDE-VRYLLTSLYSMKSPPEEEVKMFVQLFDANKDGKITFEEFKNAVPKLKEKVRKETKMNHAKTTN----SAKSLHRVRNKHVRDCRAPQQLYATPMTTAQEVGWQTASKAEKNENDPQMP--KSSCDETVFASEMIKSGIYY 209          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A7S3GWS7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWS7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.360e-11
Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 1
Query:    1 MAFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHE-QVETFLNELYQGTPKACDLARFSEKARESIENNP--LSLDVIQSLMNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMRGPRE-RYANTITAMHEHGWRDQLDFNRQMRHGKNSCPETLYASELVKSGIYF 564
            MAFFGLTALGPQ++FE++     Y+QVF + D K A+     N    L +H  ++      L+ G   A +    SE     +   P  +SLD    +M +L++E +++    + +     +F+S       +R +  M+   + +    +T   E+GW  Q D       G+     T +A+EL+K+GIY+
Sbjct:    3 MAFFGLTALGPQNAFEVNSTTFRYIQVFDEQDFKDAWIKV--NGPDALHVHRPRLPLVFKALFHGPVPANEQGPISEAFENGVFETPETISLDSYLKIMVRLREEADEQSRAREGRPNPNCEFNSTSEMSLAIRKNAAMKHELQTKLTAPLTGTQEYGWSKQ-DLKAPTA-GRGGSDITKFAAELIKNGIYY 190          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A8J1ZJA7_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZJA7_9DINO)

HSP 1 Score: 54.3 bits (129), Expect = 1.630e-5
Identity = 51/186 (27.42%), Postives = 92/186 (49.46%), Query Frame = 1
Query:    7 FFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKA-ADKNLR-GHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIENNPLSLDVIQSLMNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMR-GPRERYANTITAMHEHGWRDQLDFNRQMRHGKNSCPETLYASELVKSG 555
            FFG+T+LGP      +L+ +  +  FSD+D KKAF   AD+  +   +D++E +       ++  P+  ++   + K  E   +  L+ +     +  ++++V+K       KR +   + S + + + +R H +++ GP E Y   +T     GW ++  F    R  K SC ET Y  E+VKSG
Sbjct:   78 FFGVTSLGPAQPIGCNLLSTLGVTSFSDNDFKKAFYTLADREGKINRIDVYECMTRTYG--FEPMPEEINIFVSTMKLHE---DGVLTWEEFSGGLKAIREKVKKI-----GKRATH--YDSYKDYSDDLRKHARVKFGPMEVYKRPMTTAQAVGWHEEEVFID--RFPKQSCAETKYQDEVVKSG 249          
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Match: A0A482S0M9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0M9_9ARCH)

HSP 1 Score: 52.8 bits (125), Expect = 1.950e-5
Identity = 42/151 (27.81%), Postives = 76/151 (50.33%), Query Frame = 1
Query:    1 MAFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDIHEQVETFLNELYQGTPKACDLARFSEKARESIENNP--LSLDVIQSLMNQLKKEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMRGPRERYANTITA 447
            MAFFGLTALGPQ++F  + +   YLQ+F + D   A+K A+ +         ++   +  L+ G     D+    E A ES+++    ++      ++  L+K+ EK  + +  K     +F S++ FRE +R   K    ++ + N ++A
Sbjct:    1 MAFFGLTALGPQNAFAANAITRRYLQIFDEQDFHDAWKKANGDRT--FCAKNKIPAVMEALFHGPVPDNDMNPVVE-AFESVDDGSGMVAFATFMRIIAHLQKDAEKAEHVHDGKPRPECEFISSQSFRESLR---KNAAIKQNFQNKLSA 145          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig81.19511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JMI1_9PHAE4.230e-7664.92EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2V2Y5_9STRA1.110e-3540.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LF25_ECTSI1.360e-2557.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBM4_9STRA6.010e-2436.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2TRH2_9EUKA1.780e-1931.05Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S4DF25_9EUKA2.950e-1729.69Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S3GWS7_9STRA1.360e-1128.65Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J1ZJA7_9DINO1.630e-527.42Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A482S0M9_9ARCH1.950e-527.81Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig81contigF-serratus_M_contig81:876544..878927 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score94.4
Seed ortholog evalue6.3e-17
Seed eggNOG ortholog227086.JGI_V11_86502
Hectar predicted targeting categoryother localisation
EggNOG OGs2E0YM@1,2S8BS@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-21_006460.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size567
Cds size567
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig81.19511.1prot_F-serratus_M_contig81.19511.1Fucus serratus malepolypeptideF-serratus_M_contig81 876544..878927 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932419.1434827-CDS-F-serratus_M_contig81:876543..8766181622932419.1434827-CDS-F-serratus_M_contig81:876543..876618Fucus serratus maleCDSF-serratus_M_contig81 876544..876618 -
1690964299.824227-CDS-F-serratus_M_contig81:876543..8766181690964299.824227-CDS-F-serratus_M_contig81:876543..876618Fucus serratus maleCDSF-serratus_M_contig81 876544..876618 -
1622932419.1584024-CDS-F-serratus_M_contig81:876896..8770011622932419.1584024-CDS-F-serratus_M_contig81:876896..877001Fucus serratus maleCDSF-serratus_M_contig81 876897..877001 -
1690964299.8381894-CDS-F-serratus_M_contig81:876896..8770011690964299.8381894-CDS-F-serratus_M_contig81:876896..877001Fucus serratus maleCDSF-serratus_M_contig81 876897..877001 -
1622932419.1771863-CDS-F-serratus_M_contig81:877176..8772571622932419.1771863-CDS-F-serratus_M_contig81:877176..877257Fucus serratus maleCDSF-serratus_M_contig81 877177..877257 -
1690964299.8521774-CDS-F-serratus_M_contig81:877176..8772571690964299.8521774-CDS-F-serratus_M_contig81:877176..877257Fucus serratus maleCDSF-serratus_M_contig81 877177..877257 -
1622932419.2025647-CDS-F-serratus_M_contig81:878336..8784861622932419.2025647-CDS-F-serratus_M_contig81:878336..878486Fucus serratus maleCDSF-serratus_M_contig81 878337..878486 -
1690964299.8714638-CDS-F-serratus_M_contig81:878336..8784861690964299.8714638-CDS-F-serratus_M_contig81:878336..878486Fucus serratus maleCDSF-serratus_M_contig81 878337..878486 -
1622932419.224191-CDS-F-serratus_M_contig81:878771..8789271622932419.224191-CDS-F-serratus_M_contig81:878771..878927Fucus serratus maleCDSF-serratus_M_contig81 878772..878927 -
1690964299.8809636-CDS-F-serratus_M_contig81:878771..8789271690964299.8809636-CDS-F-serratus_M_contig81:878771..878927Fucus serratus maleCDSF-serratus_M_contig81 878772..878927 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig81.19511.1

>prot_F-serratus_M_contig81.19511.1 ID=prot_F-serratus_M_contig81.19511.1|Name=mRNA_F-serratus_M_contig81.19511.1|organism=Fucus serratus male|type=polypeptide|length=189bp
MAFFGLTALGPQDSFELSLVDSSYLQVFSDDDVKKAFKAADKNLRGHLDI
HEQVETFLNELYQGTPKACDLARFSEKARESIENNPLSLDVIQSLMNQLK
KEVEKERNENKWKRGSGSDFSSNEIFREKMRNHEKMRGPRERYANTITAM
HEHGWRDQLDFNRQMRHGKNSCPETLYASELVKSGIYF*
back to top

mRNA from alignment at F-serratus_M_contig81:876544..878927-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig81.19511.1 ID=mRNA_F-serratus_M_contig81.19511.1|Name=mRNA_F-serratus_M_contig81.19511.1|organism=Fucus serratus male|type=mRNA|length=2384bp|location=Sequence derived from alignment at F-serratus_M_contig81:876544..878927- (Fucus serratus male)
ATGGCTTTCTTCGGTCTTACTGCGCTAGGGCCACAGGACTCTTTCGAGCT GTCTCTTGTGGACTCCAGCTACCTTCAAGTGTTCTCTGATGATGACGTGA AGAAGGCTTTCAAAGCGGCAGACAAAAACCTACGAGGCCACCTGGATATC CATGAGGTGCGCCGGACGACTCGTCACATTAGGGCAGGCCCAGCAAATAG CACGCACCAGTACATACGTTGTTGCCTTGTTTCGCGTCTTAAAACCAGCT TTGGACTCTGCAACAGAGTGCACAGTATTGCATATATTTTAATGGGTGAG TACAATCAGCAGCTCTGATCACTCTGGGCACCTAAAATAGTATCTGACCA GCAAGGTAGTATTATAGTACCAGTACGAAGTATTAACTCTTAACTAATAA TATCAGTAGCAACGCGCGTATCCTCTTGATCCAAACGAGAGCAGGTGGAG ACGTTTTTGAACGAACTGTACCAAGGAACGCCCAAAGCCTGCGACCTAGC GAGATTTTCCGAGAAAGCAAGAGAAAGTATAGAGAATAACCCTTTAAGTC TCGACGTTATTCAATCTCTGATGAATCAGCTCAAAAAGGAGGTGAGACGC CTGTACTGTAGTAAAAATTGTTAATTTATGTTAATGGCCTTATCATAAAC CCTTTATCGCAAAAAAATGTGTCTTTACTGCCTTCTAGAGTGCTGCAGCG AGCGTGGTCAAAAGAGCGTCGCGTTTTTCTTGGGAGGGTGTAAATACATA CACATATTATCGCTAAAATGCGGATACGCATCTTTATCTTGTACCTGGCA CATGGATGCATTTCGTGAACAATGGAAACTCCACGTACGTACTCCCAAAA AAACTCGTACCGGATGGCCCAGATTTTTTGAGGATGTACGAGCTTCATAT GGTAGGCACTCTATAGCCTGCAAATGACGAGGACTGCTGTCACTCAATTT CACATCTCGCCCAGACTGGCGGCCTTTTTCAGGCCATACAGGAAAACCAT AGATTTCGACTCTGAGGTCCAGTGCCTCGATAGCTATTCCTACAGTCTTA AAATGATTCCGCCAAGAGAGAGCGTACTGTAATTTGTTCAGTCTTACACG CTTTTTGTTCCGGTGGTAGGGAGGAATCCAATAAATTACAGACACCGTGG TACCGTTGTTGTTGTGCCAAGATTATTTTAGATAACGAGTGCTAACGACT ATTACTAACTCTTACGCCCAGGTAAAAACAGAGAAAGCGAGTATCTGGTA GGGGTTATAGCTATGGCTATTAATAGCGCATAACGAACAAACAAAACAAA ACTGAAGAACTCGGTTCTACTTGACTTGACATTGTACGAAAGAAATTGTT TCCTCATGAACGGGAGAAGTTACAGTCACAGGCACAGGCACAGGCATGCT GCCTAAAAAGGAGTTCAATCGGAAGTAGATGTCTGTGACTAATGCTCCCT CTTTTCTCTGTCTTTGTCTTGTGGTGGCCCTCAAGGTGGGCATGCTATGT GGCATTGTCATGTATATATTATATCTGCGACGTTACGGACTTGATGCCCG TCGTAGCTTTCATTGTGCTGTATTAACAGCTTACTAATAAGAGAACAACC AGGTCAGGTCCTCCTGTCGACGATATTTACACGAGGCGACTTATCGATGT GTTTTTTCTTTGTTCAACAGGTGGAGAAAGAAAGAAACGAAAACAAGTGG AAACGCGGCTCGGGGTCGGACTTCAGTTCCAACGAAATATTTCGAGAAAA GGTGTGAGCGGATGGGCGTTGGTGGTCCTACCATGTTTGGCGTGCGTCCG TTGTGGCAGTGTTGTCAAAAGCGACATCAAATATTTTTGCCTCTTTGTTT CCATTCAGAGTAATCCATTTCAACCTCTTGAAACTGAAACTGTCCCCATA CCACACACACTACATGTCATGTAAAGATGCGGAATCACGAGAAAATGAGG GGGCCGCGGGAACGATACGCCAACACCATTACGGCCATGCACGAGCACGG TTGGCGGGATCAACTTGACTTTAACCGACAGGTGATGTATTCCCGAAAAA GTTATCAGATATTCCCGAAAAAGTCTTCGTATGCGCAAAATTTAGATATC CACCCTTTTCCTCTTCTGAAACTTTATCAAGATGTTGGCAAGGCACACAC AGATCTTTCTCCGCAATGCCTGTCATGGACGCCACCTGTCAAAGGCACCC GGGCTTTGCGCTTGGCTGACCCGGTTCCATGTGTGCCTAGAGTATTTTAT CCCCAATATCATAAGTTGATGCACGACCCGTATCTCTATCACGACCGTGT GCCAATCAGATGAGACATGGGAAAAATAGCTGCCCGGAGACATTATACGC GTCCGAATTAGTCAAGAGTGGAATTTATTTCTAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig81:876544..878927-

>mRNA_F-serratus_M_contig81.19511.1 ID=mRNA_F-serratus_M_contig81.19511.1|Name=mRNA_F-serratus_M_contig81.19511.1|organism=Fucus serratus male|type=CDS|length=1134bp|location=Sequence derived from alignment at F-serratus_M_contig81:876544..878927- (Fucus serratus male)
ATGGCTTTCTTCGGTCTTACTGCGCTAGGGCCACAGGACTCTTTCGAGCT
GTCTCTTGTGGACTCCAGCTACCTTCAAGTGTTCTCTGATGATGACGTGA
AGAAGGCTTTCAAAGCGGCAGACAAAAACCTACGAGGCCACCTGGATATC
CATGAGATGGCTTTCTTCGGTCTTACTGCGCTAGGGCCACAGGACTCTTT
CGAGCTGTCTCTTGTGGACTCCAGCTACCTTCAAGTGTTCTCTGATGATG
ACGTGAAGAAGGCTTTCAAAGCGGCAGACAAAAACCTACGAGGCCACCTG
GATATCCATGAGCAGGTGGAGACGTTTTTGAACGAACTGTACCAAGGAAC
GCCCAAAGCCTGCGACCTAGCGAGATTTTCCGAGAAAGCAAGAGAAAGTA
TAGAGAATAACCCTTTAAGTCTCGACGTTATTCAATCTCTGATGAATCAG
CTCAAAAAGGAGCAGGTGGAGACGTTTTTGAACGAACTGTACCAAGGAAC
GCCCAAAGCCTGCGACCTAGCGAGATTTTCCGAGAAAGCAAGAGAAAGTA
TAGAGAATAACCCTTTAAGTCTCGACGTTATTCAATCTCTGATGAATCAG
CTCAAAAAGGAGGTGGAGAAAGAAAGAAACGAAAACAAGTGGAAACGCGG
CTCGGGGTCGGACTTCAGTTCCAACGAAATATTTCGAGAAAAGGTGGAGA
AAGAAAGAAACGAAAACAAGTGGAAACGCGGCTCGGGGTCGGACTTCAGT
TCCAACGAAATATTTCGAGAAAAGATGCGGAATCACGAGAAAATGAGGGG
GCCGCGGGAACGATACGCCAACACCATTACGGCCATGCACGAGCACGGTT
GGCGGGATCAACTTGACTTTAACCGACAGATGCGGAATCACGAGAAAATG
AGGGGGCCGCGGGAACGATACGCCAACACCATTACGGCCATGCACGAGCA
CGGTTGGCGGGATCAACTTGACTTTAACCGACAGATGAGACATGGGAAAA
ATAGCTGCCCGGAGACATTATACGCGTCCGAATTAGTCAAGAGTGGAATT
TATTTCTAGATGAGACATGGGAAAAATAGCTGCCCGGAGACATTATACGC
GTCCGAATTAGTCAAGAGTGGAATTTATTTCTAG
back to top