mRNA_F-serratus_M_contig808.19482.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig808.19482.1 vs. uniprot
Match: D7G8Q9_ECTSI (Ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q9_ECTSI) HSP 1 Score: 259 bits (663), Expect = 3.120e-73 Identity = 261/622 (41.96%), Postives = 308/622 (49.52%), Query Frame = 1
Query: 1 MASYIVTGIHAAARAGKLQKVQDYISKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGARPDIFSXXXXXXXXXXXXXXXXXXXXXXXEHKVPLDESDEQDGTLCTTRRKRFRRTGKGSAGSGSNGGRPEREEYDPLHLRTV*TGVSLQQGGGGALPYSKACGGRERRPHQSNTSALCLPQKPYQLGPIAFGVG-------------GRGDGDRQQGKAT-VTPCGAERFPEKQGQKRRHQEASQEQDARGR*RRA*WILPPGV*WDSHGCGHVRGKKRGEQFPASSMATPKAGTTLSKAAKDANAAGSADGPRGETSFSNGDTPKSKEKPEESISNGVPTDELNGGEDSAADSAAATAVVKAAKAEVLISVAPAGKGGRKSTFGITLGSGSNHRQPLETRGAADRRSGTGSWALGDRVPNIKAGSPV--PDGASPMG--QISPEVSPINITMNDGMVSIADGKAAGEPSPTSSIKRRGAGVSAPSASAAPATGSRVKRSPQGSVAGESSTTKGSERDDMEEVSNEEVAYEMALEQIIADLDDIEERVENLNVDQKTNEDILLNVLKRVDETEKDLRKIKRATLAKDFEAKQTSATATGEVERTLGSEPPISGTSGGVS 1812
MASYIVTG+HAAARAGKLQKVQD+I+KGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGA+PD XXXXXXXXXXXXXXXXXXXXXXX G+ + +GK+ + + PE Q + S ++ G A + V H + A++ T A + KAA + A A +NG++P++ + E+I P+ + NG D A TA A A PA RKS+ +G G N +Q + SP P GA G + + S IN+TM DGMVSI DGK E SPT+ KRRG+ + AAPA SRVKRSPQGSV GESST KGSERDDMEEVSNEEVAYEMALEQIIADLDD+EERVENLNVDQKTNEDILLNVLKRVDETEKDLRK+KR T+AKDFEAKQ A G ++RTLG+EPP++ GG +
Sbjct: 1 MASYIVTGVHAAARAGKLQKVQDFIAKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGAKPDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGQSASQKNRGKSEDIIKLLKNKMPEDDDQ---GLDGSYHPESDGTLMGAAMSVAKNV------ASHTSTSSTTGEAAANTTPTAAADAVVDKAAVSTSGASKA---------TNGESPRADRQ--ETI---PPSGDSNGLVDGAPPEQTKTAAKSDAPA-------PA----RKSSLLFGVGGG-NAKQXXXXXXXXXX------XXXXXXXXXXRGNSPAAAPSGAQGAGGGDRARKKSTINLTMADGMVSIGDGKPGNEASPTN--KRRGSTYGMTTVPAAPAPASRVKRSPQGSVTGESST-KGSERDDMEEVSNEEVAYEMALEQIIADLDDLEERVENLNVDQKTNEDILLNVLKRVDETEKDLRKMKRTTIAKDFEAKQ--ANPDGALDRTLGNEPPLAPNLGGTT 576
BLAST of mRNA_F-serratus_M_contig808.19482.1 vs. uniprot
Match: A0A672QXL4_SINGR (Myotrophin-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672QXL4_SINGR) HSP 1 Score: 53.5 bits (127), Expect = 2.290e-5 Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 25 IHAAARAGKLQKVQDYISKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGA 186
+H A G+ + V+ +SKG DVN PD+ +PL+ A + GHV VK LL++GA
Sbjct: 9 LHYAVDCGQAEMVEFLLSKGADVNAPDKHGITPLLSATYEGHVSCVKILLEKGA 62
BLAST of mRNA_F-serratus_M_contig808.19482.1 vs. uniprot
Match: A0A8C6TNC9_9GOBI (Myotrophin n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6TNC9_9GOBI) HSP 1 Score: 54.3 bits (129), Expect = 2.470e-5 Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 25 IHAAARAGKLQKVQDYISKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDEGA 186
+H AA G+++ V+ ISKG +VN PD+ +PL+ AC+ H VK LL++GA
Sbjct: 37 LHVAADFGQVEVVEYLISKGANVNAPDKHGITPLLSACYENHASCVKILLEKGA 90
BLAST of mRNA_F-serratus_M_contig808.19482.1 vs. uniprot
Match: A0A224XXT2_9HEMI (Putative acyl-coa-binding protein 2 (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XXT2_9HEMI) HSP 1 Score: 55.5 bits (132), Expect = 4.030e-5 Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 2
Query: 455 NKVEVARFLILKHAVVGSVDHINRTPLHYACLKSHINSVRLLLEWGAEVMVIDNKGKLPLHL 640
+++++ +L+ A V D TPLHYAC+ H+N V+LLL+W A+VM + N LP L
Sbjct: 106 DQIKIGEYLLENGAKVDIRDSNGLTPLHYACMCRHLNVVKLLLKWSADVMAVSNDQILPKDL 167
BLAST of mRNA_F-serratus_M_contig808.19482.1 vs. uniprot
Match: A0A3B4GQI2_9CICH (Myotrophin-like n=2 Tax=Pundamilia nyererei TaxID=303518 RepID=A0A3B4GQI2_9CICH) HSP 1 Score: 53.5 bits (127), Expect = 6.080e-5 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 25 IHAAARAGKLQKVQDYISKGGDVNKPDREHCSPLMWACWGGHVEIVKRLLDE 180
+H AA G+ V+ ISKG D+N PD+ +PLM AC+ GH+ VK LL++
Sbjct: 39 LHYAADFGQTDVVEFLISKGADINAPDKHGFTPLMTACFEGHLSCVKLLLEK 90 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig808.19482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig808.19482.1 >prot_F-serratus_M_contig808.19482.1 ID=prot_F-serratus_M_contig808.19482.1|Name=mRNA_F-serratus_M_contig808.19482.1|organism=Fucus serratus male|type=polypeptide|length=338bp MATPKAGTTLSKAAKDANAAGSADGPRGETSFSNGDTPKSKEKPEESISNback to top mRNA from alignment at F-serratus_M_contig808:353682..369535+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig808.19482.1 ID=mRNA_F-serratus_M_contig808.19482.1|Name=mRNA_F-serratus_M_contig808.19482.1|organism=Fucus serratus male|type=mRNA|length=15854bp|location=Sequence derived from alignment at F-serratus_M_contig808:353682..369535+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig808:353682..369535+ >mRNA_F-serratus_M_contig808.19482.1 ID=mRNA_F-serratus_M_contig808.19482.1|Name=mRNA_F-serratus_M_contig808.19482.1|organism=Fucus serratus male|type=CDS|length=2028bp|location=Sequence derived from alignment at F-serratus_M_contig808:353682..369535+ (Fucus serratus male)back to top |