mRNA_F-serratus_M_contig808.19481.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig808.19481.1
Unique NamemRNA_F-serratus_M_contig808.19481.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 656 bits (1692), Expect = 7.950e-235
Identity = 320/395 (81.01%), Postives = 360/395 (91.14%), Query Frame = 1
Query:    1 VPGIKAAGAKIWGPLSNVVTPQKLFYFILFQVLYARVLRLLYKLQVQTWRLVRKHDPQPYEKSVLGFLEPRLRMLSRVVVIAYLLNTAVKIFIANGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAGATMTSVLYVDTTDPSPIP----AGKIQQALPQSVTKSHTPR 1173
            + G+KAAGA+ WGPL+NVVTPQKLF F+LFQ++Y R+LRLLY+LQVQ WRLVRKHDPQPYE+SVLGF+EPRLR LSR +V+AY L + V++ IA+GWNA PQLAKVLSD+VYCWYAGYFVDEAKRFFLPVWIP+LKADKRKGFIYNRSLSVLTW+IC+LTV EVIS++LRIPITSTLAFGGIGGLAIGL GKDVLSNFFGGLMLLLAEPFIPGDMVTFQR GVRCEGRVERVGWYQTR+RGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRY+D+ K+ E+LQGIK ALKDVPN+DLLSPFRVHL+DFAE+GLKIN+VCYFATKSFDEFLYLQQ++L+EVTRVVQGA ATMTSVLYVD  +P+PI     AG I  A  + V +S  P+
Sbjct:   14 IAGLKAAGARFWGPLTNVVTPQKLFLFLLFQIVYRRLLRLLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMTSVLYVDMNNPAPIGKVPLAGMINSAQNKGVAQSGLPK 408          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 362 bits (929), Expect = 3.790e-118
Identity = 176/341 (51.61%), Postives = 239/341 (70.09%), Query Frame = 1
Query:   43 LSNVVTPQKLFYFILFQVLYARVLRLLYKLQVQTWRLVRKHD-PQPYEKSVLGFLEPRLRMLSRVVVIAYLLNTAVKIFIANGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAG 1062
            L  ++ P  L  F+  ++LY +  R L+      W+     D P+ YE SVLGF+EP+L  L+  + + Y++N  + + I  GW  +   A++++ L+Y  Y  YFV+E K+ +L  W+P+L+ D+R+ +I +RS SV+ W + + + +E IS+FL+IP++STLAFGGIGGLA GL  KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTR+RGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   +PEV+  IK AL+ +P VD+LSPFRVH   F    L +   CYFATKS DE+LYLQQL+L+E+TRVV   G
Sbjct:    6 LRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGILDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECG 346          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 362 bits (930), Expect = 5.670e-116
Identity = 176/341 (51.61%), Postives = 239/341 (70.09%), Query Frame = 1
Query:   43 LSNVVTPQKLFYFILFQVLYARVLRLLYKLQVQTWRLVRKHD-PQPYEKSVLGFLEPRLRMLSRVVVIAYLLNTAVKIFIANGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAG 1062
            L  ++ P  L  F+  ++LY +  R L+      W+     D P+ YE SVLGF+EP+L  L+  + + Y++N  + + I  GW  +   A++++ L+Y  Y  YFV+E K+ +L  W+P+L+ D+R+ +I +RS SV+ W + + + +E IS+FL+IP++STLAFGGIGGLA GL  KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTR+RGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   +PEV+  IK AL+ +P VD+LSPFRVH   F    L +   CYFATKS DE+LYLQQL+L+E+TRVV   G
Sbjct:  196 LRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECG 536          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA)

HSP 1 Score: 342 bits (876), Expect = 1.560e-109
Identity = 175/355 (49.30%), Postives = 235/355 (66.20%), Query Frame = 1
Query:   19 AGAKIWG----PLSNVVTPQKLFYFILFQVLYARVLRLLYKLQVQTWRLVRKHDPQP-YEKSVLGFLEPRLRMLSRVVVIAYLLNTAVKIFIANGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAGAT 1068
            A   +W     PL  ++ P+ L  +++F+  Y+R LRL Y LQ    RL++K  P P Y ++VLGFLEPR   LSR+  + YL+N ++        N +P L ++ + L Y  YAGYF++E +RF  P W P L  DKR+ +I +RS SV  W I ++ +L+ IS+F  +P++S+LA GG+GG+AIGL  KDV+SNF GGLMLL+ EPF PGD +TF   G    G+VERVGWYQTR+R RDTRP YVPN  F +TMVTNMDRITHRKFES F ++    +++  +L  IK AL+  P +DLLSPFR +LI     GL+ +++CYFATKS DEFL LQQ   +EV R V+  G T
Sbjct:   66 AALNVWAEVPTPLRVLMRPRDLLAYLIFRTCYSRALRLGYLLQTLLSRLLKKDIPPPAYLQTVLGFLEPRFAQLSRLTGLIYLVNVSISAIGLIDLNIRPGLDRLFTKLAYTAYAGYFLNEVRRFVTPRWFPKLAEDKRRAYIVDRSASVFFWTITIVLLLDQISTFFNVPLSSSLALGGVGGVAIGLASKDVVSNFVGGLMLLITEPFTPGDFITFLYQGQWMIGKVERVGWYQTRIRNRDTRPVYVPNAFFVNTMVTNMDRITHRKFESEFHIQLDSFAQVEGLLDDIKIALQGFPKLDLLSPFRANLIAVESDGLRFSVLCYFATKSLDEFLMLQQKVFLEVGRCVESRGLT 420          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.920e-78
Identity = 126/276 (45.65%), Postives = 179/276 (64.86%), Query Frame = 1
Query:  247 YLLNTAVKIFIANGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLS-PFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAGATM 1071
            YL+     +FI    + KP    +++ + Y  Y   F D  K  FL +++P L A++R+ ++  RS SV+ W + +L   E++S++L++P++STLAFGG GGLA+GL  +DV +NF GG++LL  EPF PGDMVTF+       GRVERVGW QTR+RGRDTRPTYVPN  F  T VTNM+RITHRKFE+   LRY D + + +V+  IK  L+ +P +D ++ PFR   +      L I + CYF+TKS DEFL LQQ + +E+ + V    A++
Sbjct:    5 YLIKLLNLLFILMNLSVKPDFHIIVARVSYAIYLTNFFDMFKLKFLNLFLPNLNANRRQSYVVQRSSSVILWVVGVLIACEMVSTYLKVPLSSTLAFGGFGGLALGLSARDVAANFLGGILLLFNEPFTPGDMVTFRSGNTELLGRVERVGWGQTRIRGRDTRPTYVPNSHFVQTAVTNMERITHRKFEAIVPLRYQDHAVMSDVVTKIKEGLRKIPKLDTMTQPFRCSFVKVGSYSLDIEVTCYFSTKSIDEFLPLQQAANLEIIKAVYSCNASL 280          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A6H5L1M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M0_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 1.690e-72
Identity = 120/165 (72.73%), Postives = 130/165 (78.79%), Query Frame = 1
Query:  388 VWIPTLKADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGK-------------------------------DVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMD 789
            +WIP+LKADKRKGFIYNRSLSVLTW+IC+LTV EVIS++LRIPITSTLAFGGIGGLAIGL GK                               DVLSNFFGGLMLLLAEPFIPGDMVTFQR GVRCEGRVERVGWYQTR+RGRDTRPTYVPNGMFSDTMV++ +
Sbjct:    1 MWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKEALFVACVGIHGPRSPPLRSSLAVVCSVAKKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVSSRE 165          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A835ZID6_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID6_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.070e-71
Identity = 132/272 (48.53%), Postives = 174/272 (63.97%), Query Frame = 1
Query:   52 VVTPQKLFYFILFQVLYARVLRLLYKLQVQTWRLVRKHDP-------QPYEKSVLGFLEPRLRMLSRVVVIAYLLNTAVKIFIANGWNAKPQLAKVLSDLVYCWYAGYFVDEAKR----------------FFLPVWIPTLKADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRIT 798
            ++ P+ L  F+ F ++Y + LR++Y LQ +  R +            +P+E+S LGFLEPRLR L+RV+   Y+ N A+      G+  +P     +S +V   YAGYF+DE KR                F+LPV  P L+ D RK FIYNR+ SVLTW +  L +L+VIS+FL IP+ ST+AFGG GG+A G   K +  NFFGGL LLL+EPF+PGDMV F+  G   EGRVERVGWYQTR+RGRDTRPTY+PN +F   +VTNMDRI+
Sbjct:  208 LINPRDLALFVGFYLVYKKALRVIYGLQAKAMRAMASRSGSGAPAAVKPFEQSWLGFLEPRLRSLTRVMAGLYVANGALGGLANLGYRLRPGTQDFVSTVVATLYAGYFIDELKRQQRSRDAFCCLSCAPQFYLPVIWPELQNDMRKAFIYNRTTSVLTWTLVALGLLQVISAFLHIPLASTMAFGGAGGIAFGFAAKGIFENFFGGLTLLLSEPFVPGDMVHFEYGGEVMEGRVERVGWYQTRLRGRDTRPTYIPNNVFLSNLVTNMDRIS 479          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A7C3GKF1_9GAMM (Mechanosensitive ion channel family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C3GKF1_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 1.010e-36
Identity = 92/295 (31.19%), Postives = 160/295 (54.24%), Query Frame = 1
Query:  232 VVVIAYLLNTAVKIFIANGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLS-----VLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAGATM---TSVLYVD 1092
            V+++A+ L+ A+ +   +G     ++ ++ + +V  W    F+   +       +  +K  + KG   +R+ +     +L  ++ + +VL  + S L   I++ LAFGGIGG+A+G   KD+L+NFFGGLM+ L  PF  GD +      +  EG VE++GW  T +R  D RP Y+PN MFS   V N  R+THR+ + +  +RY DS  +PE++  +K  L + P +D      V+   FA + L   I  +  T ++ ++  ++Q  L ++T +V+  GA M   TS +++D
Sbjct:   68 VLILAFALSVAMDV---SGLKNSFKVFEIGTIVVISWTLIRFISFVE-------VNIIKQQEIKGIKVDRTTADAISQLLRVSVIITSVLVGLQS-LGFNISAILAFGGIGGIAVGFAAKDLLANFFGGLMIYLDRPFSVGDWIRSPDRSI--EGTVEKIGWRLTLIRTFDKRPLYIPNSMFSSISVENPSRMTHRRIKETIGIRYDDSKVLPEIITDVKNMLINHPEIDNTQTLMVNFNQFAASSLDFFIYTFTKTTNWIKYHEVKQDVLFKITDIVESHGAEMAFPTSTVHID 349          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A7G2ITS3_CITFR (Mechanosensitive ion channel n=1 Tax=Citrobacter freundii TaxID=546 RepID=A0A7G2ITS3_CITFR)

HSP 1 Score: 142 bits (358), Expect = 1.830e-36
Identity = 77/236 (32.63%), Postives = 129/236 (54.66%), Query Frame = 1
Query:  412 DKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAGATM---TSVLYVDTTDPSP 1110
            +K +     R LS +     ++ ++ +      + ++  L FGGIGG+A+G+ GKD+LSNFF G+ML    PF  GD +      +  EG V  +GW  T++   D RP YVPN +FS   V N  R+T+R+ ++   LRY D+ K+  V++ ++  L++ P +D      V+  +FA++ L I + C+  T  + E+L +QQ   +++  +VQ  GA     +  LY+D  + SP
Sbjct:    7 NKGRDITSARILSRIIKITIVVAIILLYGEHFGMSLSGLLTFGGIGGIAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNI--EGTVAEIGWRMTKINTFDHRPLYVPNSIFSSISVENPGRMTNRRIKTVIGLRYEDADKVGAVVESVREMLQNHPGIDQKQTLLVYFNEFADSSLNIMVYCFTKTTVWKEWLAVQQDVYLKIITIVQANGADFAFPSQTLYMDNPEASP 240          
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Match: A0A2U2AKE7_9GAMM (Mechanosensitive ion channel protein MscS n=2 Tax=Ignatzschineria TaxID=112008 RepID=A0A2U2AKE7_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 2.510e-36
Identity = 83/231 (35.93%), Postives = 121/231 (52.38%), Query Frame = 1
Query:  409 ADKRKGFIYNRSLSVLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPNVDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVVQGAGATM---TSVLYVD 1092
            ADK    I  R L +    +  L VL +      + ++  + FGGIGG+AIG   KDVLSNFF G+ML    PF  GD +       + EG V+ +GW  T++   D RP Y+PN +FS   V N  R+T+R+  +   LRY DS K+  V+  I+  L+  P +DL     V+  DF ++ L I I C+  T  + E+L  QQ   +++  +V   GA     T +LY+D
Sbjct:  124 ADKTSAKIITRVLKI----VIFLIVLLLFGEHFGLSLSGLMTFGGIGGIAIGFASKDVLSNFFSGVMLFFERPFNIGDWINSPDR--KIEGVVKEIGWRSTKIMTFDNRPLYIPNALFSSISVENPGRMTNRRINTEIGLRYEDSDKVAAVVNDIRTMLQQNPKIDLTQTLLVYFNDFGDSSLNIMIYCFTKTVKWAEWLEAQQEVYLKIIEIVHKNGADFADTTQLLYLD 348          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig808.19481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8R0_ECTSI7.950e-23581.01Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A4D9D8J2_9STRA3.790e-11851.61Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBI9_9STRA5.670e-11651.61Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A6U0TNP3_9STRA1.560e-10949.30Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0SR49_9STRA1.920e-7845.65Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5L1M0_9PHAE1.690e-7272.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZID6_9STRA2.070e-7148.53Mechanosensitive ion channel-domain-containing pro... [more]
A0A7C3GKF1_9GAMM1.010e-3631.19Mechanosensitive ion channel family protein n=1 Ta... [more]
A0A7G2ITS3_CITFR1.830e-3632.63Mechanosensitive ion channel n=1 Tax=Citrobacter f... [more]
A0A2U2AKE7_9GAMM2.510e-3635.93Mechanosensitive ion channel protein MscS n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig808contigF-serratus_M_contig808:341376..345502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score142.5
Seed ortholog evalue4.1e-31
Seed eggNOG ortholog754331.AEME01000001_gene1825
Preferred nameynaI
KEGG koko:K16052
KEGG TC1.A.23.4
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944
EggNOG free text desc.Belongs to the MscS (TC 1.A.23) family
EggNOG OGs1MXD2@1224,1RNUB@1236,3XNAZ@561,COG0668@1,COG0668@2
COG Functional cat.M
Best tax levelEscherichia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons8
Model size1173
Cds size1173
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig808.19481.1prot_F-serratus_M_contig808.19481.1Fucus serratus malepolypeptideF-serratus_M_contig808 341376..345502 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932411.114723-CDS-F-serratus_M_contig808:341375..3417181622932411.114723-CDS-F-serratus_M_contig808:341375..341718Fucus serratus maleCDSF-serratus_M_contig808 341376..341718 -
1690964295.663675-CDS-F-serratus_M_contig808:341375..3417181690964295.663675-CDS-F-serratus_M_contig808:341375..341718Fucus serratus maleCDSF-serratus_M_contig808 341376..341718 -
1622932411.1306076-CDS-F-serratus_M_contig808:341920..3420791622932411.1306076-CDS-F-serratus_M_contig808:341920..342079Fucus serratus maleCDSF-serratus_M_contig808 341921..342079 -
1690964295.6822052-CDS-F-serratus_M_contig808:341920..3420791690964295.6822052-CDS-F-serratus_M_contig808:341920..342079Fucus serratus maleCDSF-serratus_M_contig808 341921..342079 -
1622932411.148188-CDS-F-serratus_M_contig808:342376..3424711622932411.148188-CDS-F-serratus_M_contig808:342376..342471Fucus serratus maleCDSF-serratus_M_contig808 342377..342471 -
1690964295.6932895-CDS-F-serratus_M_contig808:342376..3424711690964295.6932895-CDS-F-serratus_M_contig808:342376..342471Fucus serratus maleCDSF-serratus_M_contig808 342377..342471 -
1622932411.1688929-CDS-F-serratus_M_contig808:342909..3430931622932411.1688929-CDS-F-serratus_M_contig808:342909..343093Fucus serratus maleCDSF-serratus_M_contig808 342910..343093 -
1690964295.7095678-CDS-F-serratus_M_contig808:342909..3430931690964295.7095678-CDS-F-serratus_M_contig808:342909..343093Fucus serratus maleCDSF-serratus_M_contig808 342910..343093 -
1622932411.2006166-CDS-F-serratus_M_contig808:343746..3438231622932411.2006166-CDS-F-serratus_M_contig808:343746..343823Fucus serratus maleCDSF-serratus_M_contig808 343747..343823 -
1690964295.7264187-CDS-F-serratus_M_contig808:343746..3438231690964295.7264187-CDS-F-serratus_M_contig808:343746..343823Fucus serratus maleCDSF-serratus_M_contig808 343747..343823 -
1622932411.219625-CDS-F-serratus_M_contig808:344530..3446141622932411.219625-CDS-F-serratus_M_contig808:344530..344614Fucus serratus maleCDSF-serratus_M_contig808 344531..344614 -
1690964295.7374284-CDS-F-serratus_M_contig808:344530..3446141690964295.7374284-CDS-F-serratus_M_contig808:344530..344614Fucus serratus maleCDSF-serratus_M_contig808 344531..344614 -
1622932411.237029-CDS-F-serratus_M_contig808:344785..3449231622932411.237029-CDS-F-serratus_M_contig808:344785..344923Fucus serratus maleCDSF-serratus_M_contig808 344786..344923 -
1690964295.749582-CDS-F-serratus_M_contig808:344785..3449231690964295.749582-CDS-F-serratus_M_contig808:344785..344923Fucus serratus maleCDSF-serratus_M_contig808 344786..344923 -
1622932411.2530665-CDS-F-serratus_M_contig808:345409..3455021622932411.2530665-CDS-F-serratus_M_contig808:345409..345502Fucus serratus maleCDSF-serratus_M_contig808 345410..345502 -
1690964295.7697344-CDS-F-serratus_M_contig808:345409..3455021690964295.7697344-CDS-F-serratus_M_contig808:345409..345502Fucus serratus maleCDSF-serratus_M_contig808 345410..345502 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig808.19481.1

>prot_F-serratus_M_contig808.19481.1 ID=prot_F-serratus_M_contig808.19481.1|Name=mRNA_F-serratus_M_contig808.19481.1|organism=Fucus serratus male|type=polypeptide|length=391bp
VPGIKAAGAKIWGPLSNVVTPQKLFYFILFQVLYARVLRLLYKLQVQTWR
LVRKHDPQPYEKSVLGFLEPRLRMLSRVVVIAYLLNTAVKIFIANGWNAK
PQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLS
VLTWAICMLTVLEVISSFLRIPITSTLAFGGIGGLAIGLGGKDVLSNFFG
GLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVP
NGMFSDTMVTNMDRITHRKFESSFQLRYSDSSKIPEVLQGIKAALKDVPN
VDLLSPFRVHLIDFAETGLKINIVCYFATKSFDEFLYLQQLSLIEVTRVV
QGAGATMTSVLYVDTTDPSPIPAGKIQQALPQSVTKSHTPR
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mRNA from alignment at F-serratus_M_contig808:341376..345502-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig808.19481.1 ID=mRNA_F-serratus_M_contig808.19481.1|Name=mRNA_F-serratus_M_contig808.19481.1|organism=Fucus serratus male|type=mRNA|length=4127bp|location=Sequence derived from alignment at F-serratus_M_contig808:341376..345502- (Fucus serratus male)
GTCCCTGGAATCAAGGCAGCAGGAGCGAAGATTTGGGGACCTCTTTCAAA TGTCGTTACTCCGCAGAAACTCTTCTACTTCATTTTGTTCCAGGTACGTG TAGTGTAGCACTAGGTTAGTATACGTAGTGCAGCACAAACATTTTCACAA AAAATGTGCCGCACCGCGCTAAGCAAAAAGACTTTTGAGCAAAATAGGCT TCATCTCCATAGAGCTATACATCCCCTGTACATTCGAAGAAAGTATGTCT TCCAGTTGATATGATTATTCTCGAGAGTAGAGCTGGAATAGCATGAAAAA GTCATCTACGGTGCTCTAGAATGCTCCGTCCACCTGCAGAAAGTGAGCAA GAGATATGGCGAGAAATACATGCCCGAATGACCGACCGACGTAAATCCCC GTAAATGACGAACACGGTACAGGGGTTCAAAAGCTATACTAAAGTTTCAC TCAACCCGACGTATTATCATCGACAGGCAGCCTTGAATTGAACCCCCACT TGTACTAACTGTAACTGTAACTGTGCCAGCATCAAATCAGCATCAAATCA TTTTATCATTTTTCGTGGCAATATGGCAGGTTTTGTATGCGCGCGTGTTG CGCCTCTTGTACAAGTTGCAAGTCCAGACATGGCGACTGGTGCGGAAACA CGACCCTCAGCCATACGAGAAATCCGTTCTAGGATTCCTGGAGCCAAGAT TAAGGATGCTAAGCAGGGTAAGTAAGTAAGTTCAAGTGTGTTGATGAGCG GCAAAGTGATGATCCTTTCGCGGCCTTCTCTTCTCTTCCCTTCCGATACG ATACGATAAGTCGATACGTCCTGCTCATGCAAGCCTCGCAATTGTTTCTC CTCTTAACATCGATTTCTGCAACCATCCCATCCGCCAGGTGGTCGTAATC GCGTACTTGTTGAACACTGCCGTCAAGATTTTCATCGCCAACGGATGGAA TGCCAAACCACAACTTGCTAAGGTGACCTGGGAAGCATCAAAGCCTTGCG CTAGCCGTCTGATAGATGTCTGCTAAAATTGTGTGTCGTTTTGCCGCTCA TAACGATATTGGGTATTTTAAAGGTTCTTATAGCTCAGTTAAAGTCGCCG ACGGCGCTTTAGCCCTGCCGTCACTTGTTCTGTAATCTTGACGTATAAAT AGTAATGGCGCTTTTATTAGTACTTATATTTATAGTATTATAGTACTGAA CTGTATTGTACGAGACTGCGGGAAGGAACGAAAAAAAACGATATTTTGAA TCACAAAGTCAATTTAGACCGTCCCGAGGCTTTAGGTGTCGCCGAGAGCC ACCTGAGTTTTCGCGAAGCATTTGTCAAGGCATCGCGGACTAGCCCAAGG CCGAAACCGTCCTTATTCGCTTATGTAGTGTTTTGAAGTGATACTCCTCC CTACCTTGTGAACCACTACAGCTGTATTGTACTGTACCGAGCCAATTTGC ACCGCCCGATGCTTTTCAAATCAAGTTGTACCTGAGGGTTAATCGGAGTC TTCCCCAAACATTTATTTCACCCTGTTTGATAGCGGACTCTCCCAAGGCG CAAATTTCTGCTAAATGCTCTCCGGATCGCACCGTCAACTAGTCTAGGGT GTTTACGATTTTGTTATAACTTGTTTACGGTGTGTTTTTCATCCGTAGTG TACCATTTCCCCGCTGGTGTTGATTGCAGGTGCTCTCGGACCTGGTGTAC TGCTGGTATGCGGGATACTTCGTGGATGAGGCTAAGCGGTTCTTCCTCCC AGTTTGGTACGATAATCTGCAACCTGTAATCAGCTTTTTCCTGATGATCC GATGATACTGTAGTGATATATGTACTTTCAACATGTCCACTTCATACCAA TAGTGCGGGAAAGAGAGGCGAATATTAATTGGTCCATGGTGACCTGCCAA GGCAGCACTCGTTCGGAACTGCCTTGAGGTTTACAGGCCCCGTGCCGACA GCCTCTCGGCAGTGAGCGCCATCGATATGCAATTGCGTGACCCGATAAAC TCGGCACTGACCCGATGGCATATGGCGGTTTTAAATCAATAAATGGACGC CGCCGCGGAACTCGGAGGGATCCCGTAAGTAAGCACCAGATTCAGCCAGA GTATGGAGATGAGCAGACTGACGCGAGACGGGACTGTCGAACCCGTCTCG CGTGACCAAATTCTCAGGCACGAACGGGGACAGGGAAATATTCATTTTCC CTGTTCAGCTGACCACGAGCAGGATTGGCAACCACACCCGGTTGATCCAT ACTCTTGCTTTATGTGTGACCATACATATACCTGTCACTTGAAGTATATA TATATATGATGACGCAACCCGTACATGCAAATGCGATCAGCAGAGGAGTG AATCTCGCTCGACACATTGCCGCGCCCGAATTCGCGTTGCCGTCTCTCCT CACGCTTAGGATACCAACGCTGAAAGCAGACAAACGAAAGGGTTTTATTT ACAACCGATCGCTATCGGTCCTGACGTGGGCCATCTGCATGCTTACTGTC TTGGAGGTCATCAGTTCCTTCCTGCGAATACCCATCACCTCTACCCTAGC GTTCGGGGGTATCGGAGGTCTCGCCATTGGTTTGGGTGGCAAGGTTCGCC GTTGATCCTGTATCTCTTGATATCTCTTCCACCCACCGGTCTTGCGTACT ATTACTACAGTACTATATCTGGTACAATAGTGTACTGGTACAGTCGCTCT ATAAATATCAATAGATATTTATTCTGTGCTAACTCGCGGTGGAAATCTCT CAGAAATGAGTCCCCTCGTCGGCACTTTTTCATATTTTCTAACTCTATAG ACTCCTACACGCTGAGTATATGTTTTTATAAAAGTTCTGCCTTCTTAGTC ATGCCGAGTGAGTTATGCGTCTGGCTACCTAGCCTTTAGCCTCTTCGACG CACGGAGGCGCCGATTGCCCAAATGCATGTTTCATCTTGACGCATTTTCT CGAAGTCGGGCCCACATTGCATTAGGTTGAGAACCGCATGTATGGCGACA ATAATCGTTATTTTTCCTGATAACTCCGCAGGACGTGCTTTCCAATTTTT TCGGGGGGCTGATGCTACTCCTCGCAGAGCCCTTTATTCCAGGAGACATG GTCACTTTCCAGAGAAACGGGGTGCGGTGAGATCACTCGTTACATACTCG TTACATGCCGCCTTTCCTATTCCGAAAAGCTTGCGATTTCATGTTACAAC AACGCCTGTCACATTATTACGATTCGTTCCGAGCCGAGCTCCTGGAAACG CCATTTTGTATATGTAGTCCAATTGACTACTGTGGTCATGGTTCAGGTGC GATTATCTGAGAGCAGGAAAATTTTGCCAGCAAGCGGCGACACATGCCAC CACGACATTGTCACACGATCTATTAATACCGCATCCACCTCCTCGCATTG ATGCTGCCTCCCCCGGCAATCAGATGTGAGGGACGAGTGGAGCGTGTGGG GTGGTATCAGACCAGGATGCGGGGTAGAGACACTCGTCCTACCTACGTCC CGAATGGTATGTTCTCGGATACGATGGTGACCAACATGGACCGAATCACC CACCGTAAATTCGAATCGAGCTTTCAACTCCGGTAAGCACATTGCCTTCG GCGAGAAGCATGTGAGGCAGACAGACTTGACGGTGGAAAAATTAAATTTT GGCCTCCAGGTAAAAACGTTTTTTTTTAAATGTACATGTTTTCCGTCAAT AATAGGCATACACAAATGCAAGGTATCGTTCAGCCCTCTCCAAGCTTTCA CGAGCCTTGACAAGCGTCCCCGCGGTCCGCACAGGTATTCTGATTCATCG AAAATACCAGAAGTACTACAGGGAATAAAGGCTGCCTTGAAGGATGTCCC GAACGTGGATCTACTGAGCCCGTTTCGCGTTCATCTCATCGATTTTGCGG AGACGGGGCTCAAGATAAACATCGTATGCTATTTCGCGACTAAGTCTTTC GACGAATTCTTGTACCTGCAGCAGCTTTCCCTCATCGAGGTTACCCGCGT GGTTCAGGGTGCCGGCGCTACGATGACGAGCGTGTTGTACGTGGATACCA CCGACCCGTCCCCCATACCGGCGGGCAAGATTCAACAAGCCCTGCCGCAG TCGGTTACGAAGTCACATACCCCAAGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig808:341376..345502-

>mRNA_F-serratus_M_contig808.19481.1 ID=mRNA_F-serratus_M_contig808.19481.1|Name=mRNA_F-serratus_M_contig808.19481.1|organism=Fucus serratus male|type=CDS|length=2346bp|location=Sequence derived from alignment at F-serratus_M_contig808:341376..345502- (Fucus serratus male)
GTCCCTGGAATCAAGGCAGCAGGAGCGAAGATTTGGGGACCTCTTTCAAA
TGTCGTTACTCCGCAGAAACTCTTCTACTTCATTTTGTTCCAGGTCCCTG
GAATCAAGGCAGCAGGAGCGAAGATTTGGGGACCTCTTTCAAATGTCGTT
ACTCCGCAGAAACTCTTCTACTTCATTTTGTTCCAGGTTTTGTATGCGCG
CGTGTTGCGCCTCTTGTACAAGTTGCAAGTCCAGACATGGCGACTGGTGC
GGAAACACGACCCTCAGCCATACGAGAAATCCGTTCTAGGATTCCTGGAG
CCAAGATTAAGGATGCTAAGCAGGGTTTTGTATGCGCGCGTGTTGCGCCT
CTTGTACAAGTTGCAAGTCCAGACATGGCGACTGGTGCGGAAACACGACC
CTCAGCCATACGAGAAATCCGTTCTAGGATTCCTGGAGCCAAGATTAAGG
ATGCTAAGCAGGGTGGTCGTAATCGCGTACTTGTTGAACACTGCCGTCAA
GATTTTCATCGCCAACGGATGGAATGCCAAACCACAACTTGCTAAGGTGG
TCGTAATCGCGTACTTGTTGAACACTGCCGTCAAGATTTTCATCGCCAAC
GGATGGAATGCCAAACCACAACTTGCTAAGGTGCTCTCGGACCTGGTGTA
CTGCTGGTATGCGGGATACTTCGTGGATGAGGCTAAGCGGTTCTTCCTCC
CAGTTTGGTGCTCTCGGACCTGGTGTACTGCTGGTATGCGGGATACTTCG
TGGATGAGGCTAAGCGGTTCTTCCTCCCAGTTTGGATACCAACGCTGAAA
GCAGACAAACGAAAGGGTTTTATTTACAACCGATCGCTATCGGTCCTGAC
GTGGGCCATCTGCATGCTTACTGTCTTGGAGGTCATCAGTTCCTTCCTGC
GAATACCCATCACCTCTACCCTAGCGTTCGGGGGTATCGGAGGTCTCGCC
ATTGGTTTGGGTGGCAAGGATACCAACGCTGAAAGCAGACAAACGAAAGG
GTTTTATTTACAACCGATCGCTATCGGTCCTGACGTGGGCCATCTGCATG
CTTACTGTCTTGGAGGTCATCAGTTCCTTCCTGCGAATACCCATCACCTC
TACCCTAGCGTTCGGGGGTATCGGAGGTCTCGCCATTGGTTTGGGTGGCA
AGGACGTGCTTTCCAATTTTTTCGGGGGGCTGATGCTACTCCTCGCAGAG
CCCTTTATTCCAGGAGACATGGTCACTTTCCAGAGAAACGGGGTGCGGAC
GTGCTTTCCAATTTTTTCGGGGGGCTGATGCTACTCCTCGCAGAGCCCTT
TATTCCAGGAGACATGGTCACTTTCCAGAGAAACGGGGTGCGATGTGAGG
GACGAGTGGAGCGTGTGGGGTGGTATCAGACCAGGATGCGGGGTAGAGAC
ACTCGTCCTACCTACGTCCCGAATGGTATGTTCTCGGATACGATGGTGAC
CAACATGGACCGAATCACCCACCGTAAATTCGAATCGAGCTTTCAACTCC
GATGTGAGGGACGAGTGGAGCGTGTGGGGTGGTATCAGACCAGGATGCGG
GGTAGAGACACTCGTCCTACCTACGTCCCGAATGGTATGTTCTCGGATAC
GATGGTGACCAACATGGACCGAATCACCCACCGTAAATTCGAATCGAGCT
TTCAACTCCGGTATTCTGATTCATCGAAAATACCAGAAGTACTACAGGGA
ATAAAGGCTGCCTTGAAGGATGTCCCGAACGTGGATCTACTGAGCCCGTT
TCGCGTTCATCTCATCGATTTTGCGGAGACGGGGCTCAAGATAAACATCG
TATGCTATTTCGCGACTAAGTCTTTCGACGAATTCTTGTACCTGCAGCAG
CTTTCCCTCATCGAGGTTACCCGCGTGGTTCAGGGTGCCGGCGCTACGAT
GACGAGCGTGTTGTACGTGGATACCACCGACCCGTCCCCCATACCGGCGG
GCAAGATTCAACAAGCCCTGCCGCAGTCGGTTACGAAGTCACATACCCCA
AGAGTATTCTGATTCATCGAAAATACCAGAAGTACTACAGGGAATAAAGG
CTGCCTTGAAGGATGTCCCGAACGTGGATCTACTGAGCCCGTTTCGCGTT
CATCTCATCGATTTTGCGGAGACGGGGCTCAAGATAAACATCGTATGCTA
TTTCGCGACTAAGTCTTTCGACGAATTCTTGTACCTGCAGCAGCTTTCCC
TCATCGAGGTTACCCGCGTGGTTCAGGGTGCCGGCGCTACGATGACGAGC
GTGTTGTACGTGGATACCACCGACCCGTCCCCCATACCGGCGGGCAAGAT
TCAACAAGCCCTGCCGCAGTCGGTTACGAAGTCACATACCCCAAGA
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