mRNA_F-serratus_M_contig805.19453.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig805.19453.1
Unique NamemRNA_F-serratus_M_contig805.19453.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig805.19453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig805contigF-serratus_M_contig805:209277..214394 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-22_000380.1
Exons3
Model size504
Cds size501
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig805.19453.1prot_F-serratus_M_contig805.19453.1Fucus serratus malepolypeptideF-serratus_M_contig805 209277..214393 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932402.8751597-CDS-F-serratus_M_contig805:209276..2096261622932402.8751597-CDS-F-serratus_M_contig805:209276..209626Fucus serratus maleCDSF-serratus_M_contig805 209277..209626 +
1690964291.4748394-CDS-F-serratus_M_contig805:209276..2096261690964291.4748394-CDS-F-serratus_M_contig805:209276..209626Fucus serratus maleCDSF-serratus_M_contig805 209277..209626 +
1622932402.8918738-CDS-F-serratus_M_contig805:212523..2126471622932402.8918738-CDS-F-serratus_M_contig805:212523..212647Fucus serratus maleCDSF-serratus_M_contig805 212524..212647 +
1690964291.488686-CDS-F-serratus_M_contig805:212523..2126471690964291.488686-CDS-F-serratus_M_contig805:212523..212647Fucus serratus maleCDSF-serratus_M_contig805 212524..212647 +
1622932402.9339752-CDS-F-serratus_M_contig805:214366..2143931622932402.9339752-CDS-F-serratus_M_contig805:214366..214393Fucus serratus maleCDSF-serratus_M_contig805 214367..214393 +
1690964291.5010018-CDS-F-serratus_M_contig805:214366..2143931690964291.5010018-CDS-F-serratus_M_contig805:214366..214393Fucus serratus maleCDSF-serratus_M_contig805 214367..214393 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig805.19453.1

>prot_F-serratus_M_contig805.19453.1 ID=prot_F-serratus_M_contig805.19453.1|Name=mRNA_F-serratus_M_contig805.19453.1|organism=Fucus serratus male|type=polypeptide|length=167bp
GGGGGIHSTTTSSGNSSVSANFSGFGRFKSSFFGSSSTSSVPAGPPPEAA
PSLLSAVAAKKPPSSTGSGRSTRDVDSDTGGQRAAEDLPEEEGYVGENGS
GEGAGGNFREVPPRIMSGRPAAATKTPSPPPDDAAGGGNGFDRSSDTDEL
GTGTRASQDRRPGGTGR
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mRNA from alignment at F-serratus_M_contig805:209277..214394+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig805.19453.1 ID=mRNA_F-serratus_M_contig805.19453.1|Name=mRNA_F-serratus_M_contig805.19453.1|organism=Fucus serratus male|type=mRNA|length=5118bp|location=Sequence derived from alignment at F-serratus_M_contig805:209277..214394+ (Fucus serratus male)
GGCGGAGGCGGAGGTATCCACAGCACTACTACAAGCAGTGGTAATAGTAG
CGTTTCGGCGAACTTCAGCGGTTTCGGCCGTTTCAAGAGCAGCTTTTTCG
GGAGCTCCTCGACGTCGTCGGTCCCGGCCGGCCCTCCTCCCGAGGCGGCG
CCCTCGCTGTTATCGGCAGTGGCCGCGAAGAAACCGCCAAGCTCCACGGG
CTCGGGTCGCTCGACCAGAGATGTCGACTCGGACACCGGCGGACAGAGGG
CCGCCGAGGACCTCCCGGAAGAGGAAGGTTACGTTGGGGAGAACGGAAGC
GGCGAGGGGGCGGGCGGAAACTTCAGAGAAGTTCCTCCTCGCATTATGAG
GTGATCGAGGCGTGTGAAGTACGGATTGAAGAGGCAGAGCGCTCGCGGGA
GTGGAGTGCCCGCTCGAAGCAGATATATCCGAATTGTTCACGTCGTTATA
TTCTCGTCCTCCTCGATGAAGGAAAACATTCAATTTGAAAATGTTCAAAG
CCTAGAAACTCATCAAAGATAGAAAATAACACTTTTTTCGCTTAACGCCA
AAGGCAGGACAGACTCGGTACGGACGGCTCCCCCCCCCCTCCCCCCGGCG
TATGGTGTCGTATGTCGTTGATTAATCGGTTATTAACTTGGGCTTATAAT
AGTTTGGGGAATATTTTTTGTAACCACTTGTATGGCGGGTTTGTCCCTAC
AAACTTAACGCGCACTAGATACGTTAAAAAAAAAAGTGCAGTTTAATCAG
TCGACAACTTGCCAAAGCTTGTGTCCAGTTCGGATTTCAGGTGAGAGCCA
TACTTTTTAATTTTAAAGATTTGGGGAAAGAGATAAAATACGACGAAAGG
TTAAGGAAAGTTTGTGAGCAACGCGATTGTAGCTTAAGGCGCGCCAATTT
GGCTATTTAAAAAAAAAGAAAGCGCCAAAAACATACCTGATAAGTTATAG
AGATAGTGAAAGCAAAACTTCGTGCCGAACAAAACCAGCCATAAATCTTA
TGCGATCTTCGACAAAAGAATGCACTGCCGTGTCATGCATCGGTAGACTC
CGCTCCCATCACGGCCGGCCCTTTCTTCGACGTTAAGGAGATATAATAAA
CTCTGCCAGCGGTGAAAAACGCGATTTGGCTATTAATATCAATAATAGTA
TACTATCAATATTAATACCGCCCAAGTGCTAATGGTACTGGATCCTGTAC
CCTGCCTTTATGTATATCGGTTCTCTGCGCTTTACCTGCCCTTTTTCGGA
CATTTTGTTCTTTGTATCTTTTTCTTTGGTACAATATAGAGCTACTTCCG
TACAATATAGTGTAAAAAAATATATATTTTGGATGGGGGAGTCGGGGAAG
AGATTTTTCTGGCTTTGTTTTATGGGGTATTTTTCGTTGATTTTATTTTT
GTGCTTTTTTAGCGCCTTATTTTTTTATATTTATTCTTCTTTCATATATA
TATATATTTTTTTTGGGGGGGGGGGGGCGGCAGGGCGGCAGGGTCAGTGA
GATATTTTTTATTTTCTATTGGGTATATATTATTTAACTTTATTTGATGG
CCCTTTTTTTTAAGTGATTTTTTTTTTTTTGCTTTTTCTGCTTTCTGCTT
TCTGCTTTCTCTTGAGCGTTGTTAAGTTTCCTCTGATATTTCCCCCTGTC
TGTAGTAGACCGTGTGCCGAATAGGCAACCGCATATATTACTTTAGTGTG
GTTGAGGCCCGATCAGCTCACGCGAACAACACACACACACATTCCCCTTT
GTCGCGTCTGATCAGAGGTTTTCATAATAAGTATCATTGATCCCCCTCGG
GAGGATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTG
CGTGGTTATGTGCAATTTAATAAATACACACACACACACACACACACACA
CTCATTGATCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAG
GATGACACGGCCGGATTGCGTGGTTATGTGCAATTTAATAAATACACACA
CACACACACACACACACACTCGTAGTAATTATCATTGATCCCCCCTCGGG
AGGATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGC
GCGGTTATGTGCAATTCAATAAATACACACACACACACACACACACAGTG
GCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATT
TAATAAATACACACACACGTAATAAGTATCATTGATCCCCCCTCGGGAGG
ATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGTG
GTTATGTGCAATTCAATAAATACACACACACACACACACACACACTCGTA
GTAATTATCATTGATCCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAA
TGACTAGGATGACAGGGCCGGATTGCGCGGTTATGTACAATTTAATAAAT
ACCAGGTACACACACACACACGCGCGCGCGCGCGCGCGTCTGATCAGAGG
TTTTCGTAATAAGTATCATTGATCCCCCCTCGGGAAGATCAATGCGAGTG
GCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATT
TAATAATTACACAAACACACACACACACACACACACACACAGATGTAGAA
AAGAAGGGATTGATCCAGTAGCTGCCAACTCAGATAGTCAAGAGAGAAAC
AAGGAAGCAGGGGGGGGAGCACAAGGAACTCTGGGCTTAAGTATGAATTG
TACAAGTAGAGAGAGCGTGTCCCCTTTGTCGCGTCTGATCAGAGGTTTTC
GTAATAAGTATCATTGATCCCCCCTCGGGATGATCAATGCGAGTGGCATA
GAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAATA
AATACACACACATAAATACGCACACACACACACACACACACTATCATTGA
TCCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGACA
GGGCCGGATTGCGTGGTTATGTGCAATTTAATAAAAACACACACACACAC
ACTACCCCCCCAAAAAATTACGCCGGTTTAAACGTAAAGCACTACGTAGC
TCTACAACGGAAAACCAACCTATTTTTTCTTGTGATAGCGCCGTCTCTGG
TAAAACAGTTTCACCTATTAATAGTTAATAGCCTGCCACCCTCCCACTCA
CGCCTTCCCGTGCCAAAACGCTTGCGTCTTCGCGTGCCCCTCACTAGCGG
GCGTCCCGCGGCAGCAACCAAGACCCCCTCGCCACCTCCCGATGATGCTG
CCGGCGGCGGAAATGGCTTCGATCGCAGCAGCGACACGGATGAACTCGGC
ACCGGCACTCGTGCCTCACAGGTAGCATTGGAGGTGGGGGCCGGAAGACG
GTTTCATGTGGATTTTCCTAGGAAAATCCAACCGTGTTGTTCTGAAACCC
CGTTGTTTTGTGGCAGACCACTTTTAAGGCACACCACCTCTTCACCACAG
AGACAAAAGAGACATCTGGCCTCAAGGAGCGTGTACGTCTTTAGTATTTA
ACTGCCTAGGAAGGCGCTCAACATGGCCTAAAAATGACAGATGCACTACA
GTACGAGTAAGAAAAGGGGAGGTACAAAAAATGGCAAGAAAGGGAGTTGC
ACCAAGAATGCGTGTCTGTCGTCTAGGGGGGGGGAGTAAGGGGCTGTCGA
TCATGAAGAGAGATGGGCGGTTTTAATCTCAAGTACCCTGACTGTTTTTT
GTTTGTTTTGTTTTTCTGTTAAAAACATTCCAACAAATTCGCACTCGAGT
ACTAAAAGCACCTTAGAGATTCCATTTGTTACCTGCCGCAATAGTATCGT
CTGTCCAGTATTTTGTAGTAGCGTTTCTGGAGCTCGCAGAAAGTGCGCGT
CGCGCTCTGGGGACAGCCGTTATATCTTTAAACTGTATACTGTGTACCGG
GTGCAGACAGCAGCAACCGACGAGGCTTGCTCTTTTACAAGTAGTCTTTG
GCTGACAAGGAGGGAAAAGACAAAAAGCACGCTCTCACACACAAACACAC
AGGTTTTCTTCACAACTGACGGTATGCATCATTGATTCCTTAACACCCCT
TTGTGAGGACCTGTGCAAGGAGTTTAGCATTACTACTAATATTAAGATCA
ATAGGATGACAGGGCCGGATCGCGCGATCATGTGCAATTTAGTAAATACA
CACCGACAGGTACATTACAAAACACTCATTCCTCGGAACAAGCTTCGGTT
TCGAGGATAGGGTAATAGGGCAACAGGAGACAGCGAGGGGGTGTCGCCAA
GCATCGTACGGGACGCAACGCCATTCCGTGTCATTCCATTACATTCCATT
CCATTCCCGGTATTATGCCTCCGATACTTTCTGTATCACATATAACATGC
CAGTTTCATACTAATAATAGTATAGTGGGTGTGGGGAAAGAGAGGCGCAC
ATTAATTGGTCATAGTCCATGGTAACCTGAAAAGGCAGCACCCGTTACTG
GAACTACCTTGAGGACTACTGGCCCTGAGCCGGCGGACTCTCGGCAGTGA
ACGCCATCGGTGCGCAATTGTTTGACCTGATAAACTATTAATAGGGACTT
GCCCGATGGCGGTTGGCGGTATAAATTTATAGACGCCGCCGCGGAAATCG
GGAGGAATCCCGTGAGTAAGCTCCAGATTCAGCCTGAGTGTGGAGAATGA
GCAGGCTGACGTGGGACGGGAATTGCCAAACCCATCTCGCGAGACCAAAT
TTACAGGCGCGAACGGGGACGGGGAAATGTTCAGTTTCCCTGTTCAGCTG
ACCACGAGCACGATTGGCAACCTTACCCGGTTGATCCATACTCTTACCAT
AAGTGATGACCATACATACATATATTACTCATAACATCCAGTCATAAGCG
GCACCATGCAGGACATGAGATATGTCATACGCTCTGCTGTACACTGTATA
CTGTATGCTGTACACGTGATGATGAGTCCATAACAGATGGACCCCCCTCG
TGGCAGAGGGTAATGCCTGAAGAATATAATAGTACGTCTTCTTCATGGTA
CCCACTGCTTCACTCGCAGCGCTTGAACCACCTCCTCCAGGATCGTCGCC
CCGGCGGGACGGGCAGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig805:209277..214394+

>mRNA_F-serratus_M_contig805.19453.1 ID=mRNA_F-serratus_M_contig805.19453.1|Name=mRNA_F-serratus_M_contig805.19453.1|organism=Fucus serratus male|type=CDS|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig805:209277..214394+ (Fucus serratus male)
GGCGGAGGCGGAGGTATCCACAGCACTACTACAAGCAGTGGTAATAGTAG
CGTTTCGGCGAACTTCAGCGGTTTCGGCCGTTTCAAGAGCAGCTTTTTCG
GGAGCTCCTCGACGTCGTCGGTCCCGGCCGGCCCTCCTCCCGAGGCGGCG
CCCTCGCTGTTATCGGCAGTGGCCGCGAAGAAACCGCCAAGCTCCACGGG
CTCGGGTCGCTCGACCAGAGATGTCGACTCGGACACCGGCGGACAGAGGG
CCGCCGAGGACCTCCCGGAAGAGGAAGGTTACGTTGGGGAGAACGGAAGC
GGCGAGGGGGCGGGCGGAAACTTCAGAGAAGTTCCTCCTCGCATTATGAG
GGCGGAGGCGGAGGTATCCACAGCACTACTACAAGCAGTGGTAATAGTAG
CGTTTCGGCGAACTTCAGCGGTTTCGGCCGTTTCAAGAGCAGCTTTTTCG
GGAGCTCCTCGACGTCGTCGGTCCCGGCCGGCCCTCCTCCCGAGGCGGCG
CCCTCGCTGTTATCGGCAGTGGCCGCGAAGAAACCGCCAAGCTCCACGGG
CTCGGGTCGCTCGACCAGAGATGTCGACTCGGACACCGGCGGACAGAGGG
CCGCCGAGGACCTCCCGGAAGAGGAAGGTTACGTTGGGGAGAACGGAAGC
GGCGAGGGGGCGGGCGGAAACTTCAGAGAAGTTCCTCCTCGCATTATGAG
CGGGCGTCCCGCGGCAGCAACCAAGACCCCCTCGCCACCTCCCGATGATG
CTGCCGGCGGCGGAAATGGCTTCGATCGCAGCAGCGACACGGATGAACTC
GGCACCGGCACTCGTGCCTCACAGCGGGCGTCCCGCGGCAGCAACCAAGA
CCCCCTCGCCACCTCCCGATGATGCTGCCGGCGGCGGAAATGGCTTCGAT
CGCAGCAGCGACACGGATGAACTCGGCACCGGCACTCGTGCCTCACAGGA
TCGTCGCCCCGGCGGGACGGGCAGGGATCGTCGCCCCGGCGGGACGGGCA
GG
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