mRNA_F-serratus_M_contig804.19437.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: D7FXC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC3_ECTSI) HSP 1 Score: 1012 bits (2616), Expect = 0.000e+0 Identity = 537/714 (75.21%), Postives = 596/714 (83.47%), Query Frame = 2
Query: 260 QGSENDALLGWV-----------------RPK-SDKLRGGSGV-GKTANFTEGPLGGNSRSRVVSYDAASSLGLSRSISSRVRLESWEFPGWGSHFRMISPP--ELETHSFDEGSGAEKLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAFFHVTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWTGNCLGIHEPNGIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKIASATGF-GSVSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 2335
+GSENDALLGW R K S KL+GGSG G T +TEGPLG +RSR+ SYD+A++LGL R +SSRVRLESWEFPGWGSHF M PP L S D G G EKLGEWYATAISGNDILSSVLYV+GLVTG A WLSPVCL MVAG+LYLYRFIYGEAISALPMNGGAYNVLIN TSKPVASFAACLAVISYIATGVVSAATAVSYLQ L+P+ GLMTCTIGLLF FACL+T+GISESAG ALGMF+ HVFTLT +CV SA YAF++VT L ENL + FP + V G++V G+W TA+LFG SSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQ GVA+FNPA+CLLSLCVLPM+EI+ YKH MLAIMAKRVG W G CLG+ P G+DLGE+F+FWVSLDAFVVLSGAVLTAYVGI+GL++RMAKDR LPQ ML+KNKWRGT H IFGFFLLATSQV+ILQG+ITTLSGVYTF+FLG+M LFS+GTI+LKFKRPSLPREVTVSY T + G CVITAF+GNM+SKP VSWF++YFM G V+VL F RVRLLKI LK A G SS+KDQ+HE+QDEPFVF CKQ D YVINKAILYVR NEHT+RL+VVH S D E I L+K IEMFDTMYPKIKISLLT+TG+F+P IDWLS+ELGVLKNKFFITCLDSVFKYKIQELGGVRVITH
Sbjct: 59 RGSENDALLGWGSGGNASNTMIPSTVGRGRGKGSSKLKGGSGDRGGTTAYTEGPLGSGARSRMASYDSATTLGLPRRVSSRVRLESWEFPGWGSHFTMNPPPGLALSNPSKDNG-GHEKLGEWYATAISGNDILSSVLYVTGLVTGFAGWLSPVCLLMVAGILYLYRFIYGEAISALPMNGGAYNVLINTTSKPVASFAACLAVISYIATGVVSAATAVSYLQTLIPAAGLMTCTIGLLFFFACLMTMGISESAGVALGMFVVHVFTLTAVCVLSACYAFYNVTILKENLQQDFPAVTVGGTVVEGTWVTAILFGVSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQWGVAVFNPAICLLSLCVLPMEEIIEYKHSMLAIMAKRVGYWAGGCLGLPTP-GLDLGEIFAFWVSLDAFVVLSGAVLTAYVGISGLLARMAKDRCLPQFMLRKNKWRGTYHYTIFGFFLLATSQVIILQGDITTLSGVYTFSFLGVMTLFSVGTILLKFKRPSLPREVTVSYATTLVGITCVITAFVGNMLSKPEVVSWFLIYFMAVGFVVVLVFLRVRLLKILLKFAHPVCCDGVTSSIKDQLHELQDEPFVFFCKQPDTYVINKAILYVRDNEHTNRLIVVHCSNDVEGATIKTLSKHIEMFDTMYPKIKISLLTVTGSFSPGTIDWLSQELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 770
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: A0A836CNH3_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH3_9STRA) HSP 1 Score: 790 bits (2041), Expect = 1.670e-274 Identity = 432/684 (63.16%), Postives = 506/684 (73.98%), Query Frame = 2
Query: 293 VRPKSDKLRGGSGVGKTANFTEGPLGGNSRSRVVSYDAASSLGLSRSISSRVRLESWEFPGWGSHFRMISPP-ELETHSFDEGSGAEKLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAFFHVTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWTGNCLGI--HEPNGIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKIASATGFGSVSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 2335
+R K DKL G TE PLGG +R R+ SYD+A+ LGLSR +S RVRLESWEFPGWGSHFRM P EL + KLGEW ATAI GNDILSSVLYVSGLVT A WLSPVCL MVAG+LYLYRFIYGEAISALPMNGG+YNVLIN TSK +ASFAACLA+ISYIATGVVSAATA++YL+ L P + T+ LLF FACL+ GISES+ ALGMF+ HV TL L V +AAYA F TT HEN+ FPDI+V G++V G+W TALLFGFSSAMLGVSGFESSSQ NM +GVA+FNP +CLLS CVL MDEIV ++H MLA+MA RVG W + G+ + +LG F WVSLDAF+VLSGAVLTAYVGITGLI RMA DR LPQ +L+ N+WRGT H IIFGFF+LAT+QV +L+G+IT LSGVYTFAFLG+M++FS G I+LKFKRP LPR+VTVSY G V+TAF+GNMISKP +S+F LYF+ GLV++ FQR+R+LK V+ LK+QI E++ +P++F CK DLY INKAILYVR NE T RLLVVHVS D E I L+ I MFDTMYP+IKISLLT+ GTF+P LI+WLS+EL V KN FITC D+VFKYKI++LGGVRVITH
Sbjct: 13 IRLKKDKLTGARTNDAPRYHTEHPLGGPTRGRLASYDSAT-LGLSRRVSDRVRLESWEFPGWGSHFRMTVPQDELRLIEEEHEKHHPKLGEWAATAICGNDILSSVLYVSGLVTSSAGWLSPVCLLMVAGLLYLYRFIYGEAISALPMNGGSYNVLINTTSKAIASFAACLAIISYIATGVVSAATAIAYLRTLWPELDAQLATVALLFFFACLMGYGISESSDVALGMFVLHVATLFALAVGAAAYACFETTTFHENIQRDFPDIIVGGNLVQGNWATALLFGFSSAMLGVSGFESSSQ---------------NMWMGVAVFNPVLCLLSFCVLQMDEIVAHRHSMLALMANRVGYWLSDRAGLLGYNTQSFNLGVAFEAWVSLDAFIVLSGAVLTAYVGITGLIRRMAMDRCLPQFLLRTNEWRGTNHFIIFGFFVLATTQVYLLRGDITLLSGVYTFAFLGVMSIFSSGCIILKFKRPKLPRDVTVSYAAIAIGLTFVLTAFVGNMISKPEILSYFSLYFIAVGLVVLSVFQRIRILK-------------VNFLKEQISELRSQPYLFFCKADDLYTINKAILYVRENEQTDRLLVVHVSPDTEGGHIKALSNHIMMFDTMYPRIKISLLTVEGTFSPALIEWLSRELAVPKNMMFITCPDAVFKYKIEKLGGVRVITH 667
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: A0A835YT58_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT58_9STRA) HSP 1 Score: 562 bits (1448), Expect = 3.090e-185 Identity = 330/669 (49.33%), Postives = 448/669 (66.97%), Query Frame = 2
Query: 365 LGGNSRSRVVSYDAASSLG-LSRSISSRVRLESWEFPGWGSHFRMISPP-ELETHSFDEGSGAEK--LGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAFFHVTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWTG-NCLGIHEPNGIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKIASATGFGS--VSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTIT-----GTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 2335
LGG+ RS S+ S L R S++ +ES++ PG+G H+++ P LE EG K LGEW +TAI NDILSSV+Y SGLV+ A L+PVCL +VAGVL+L++ IY EAISALP NGG+YNVL+NATSK VA+ AAC+ V+SY+ TGVVSAA+A++YL ++ P V L+ T+ LL FACL G+SESA A+G+F HV TLT +C+ S+ Y F+ TLH N+ G+PD++++G V G+++TAL FG S+A LGVSGFE+S+QFVEEQ GVF KTL NM GV +FNP +C+LSL VL +DE+V +K +LA + +RVG+W LG+H G LG + WVS+DAF+VLSGAVLTAYVGITGL+ MA+DR LPQ +L N+ G+ HNIIFG+FLL +S VL++ G+I L +YT AFL +M F++G ++L+ KR LPR++T T + V T+ + N+ KP + +F+LY ++ L F+RVRLLK+ + S + ++ ++ + D P VF CK+ DLYV+NKA LYVR NE T RLL+VH + +P S IT L++ M MYPK+ SL+T+T TF+ LI+W +E V +N F+TC +SV K KI ELGGVRVITH
Sbjct: 13 LGGHDRSHSFSHATPDSAHYLIRQTLSKLSVESFQHPGFGRHYKVDVPAGPLE---LIEGQAKPKHLLGEWMSTAICANDILSSVIYTSGLVSATAGVLAPVCLFIVAGVLHLFKSIYCEAISALPSNGGSYNVLLNATSKSVAALAACVTVLSYVTTGVVSAASAIAYLHVVFPQVHLVYGTVLLLLFFACLTAFGVSESARVAVGIFALHVLTLTAVCLLSSVYVAFNSATLHANIEAGYPDVILAGGRVRGTFWTALFFGVSTAFLGVSGFETSAQFVEEQVAGVFPKTLSNM-FGVTVFNPLLCVLSLGVLDIDEVVTFKDSVLAHVVRRVGNWLQIELLGVHG-GGAHLGSLLMTWVSIDAFIVLSGAVLTAYVGITGLVRTMARDRCLPQFLLATNR-NGSCHNIIFGYFLLGSSLVLLMGGDIEVLGNIYTMAFLCVMIAFAVGVVLLQAKRLKLPRDITTPPLTLALALLAVGTSLVVNVAFKPEILVYFLLYLGCVLALVGLMFERVRLLKLVAHVVDKWSPRSRLAAWVQLEVQRVLDVPCVFFCKRDDLYVLNKAALYVRNNEQTQRLLIVHATSNPFSDTITGLSEHATMLCAMYPKLSSSLVTLTFPPGHETFSGALIEWFCQEWDVPRNMCFVTCSNSV-KVKISELGGVRVITH 674
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: W7U6R6_9STRA (Transmembrane protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6R6_9STRA) HSP 1 Score: 555 bits (1431), Expect = 3.320e-182 Identity = 311/644 (48.29%), Postives = 424/644 (65.84%), Query Frame = 2
Query: 434 ISSRVRLESWEFPGWGSHFRMISPPELETHSFDEGSGAE---KLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAFFHVTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWT--GNCLGIHEPN----GIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKIASATGFG-SVSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 2335
+S++ +E+W FPGWG + ++ + E + + KL +W ATAI GNDI++S YV GLVT A ++P+ L +V+ VLYL RF+Y EAI+ALPMNGG++NVL+N+TSK +AS AA LA++SYIATGVVSA +AV YL+ +V + +GLLF+FA LV +GI ESAG A +F H+FTLT+LC S Y +TL EN +PD+ + G + +GS+ TA+ FG++SA+LGVSGFESSSQFV+ QA GVF+KTLRNM VG +FNP + LSL VLP+ IV + +LA MAK VG W G G+ G+ G WVSLDAF+VLSG++LTAYVG+ GLI RMA DR LPQ +L++N WR T HNII G+ + + VLIL+GN+T LSGVY+ AFL ++ LF++GT++LKFKRPSLPR+VTVS+ + + ++ +GN++ P + F+ Y G +++L FQ LL+ + + G L+ ++ Q P +F CK D+YV+NKA+LYV NE + L+V+HV D + L+ +E FDTMYPKIK +LLTI G F P LI++L +EL V N FI D FKYK+ +LGGVRVITH
Sbjct: 67 LSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVH-DKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH 709
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: A0A7S1UN14_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UN14_9STRA) HSP 1 Score: 545 bits (1404), Expect = 3.640e-178 Identity = 321/676 (47.49%), Postives = 430/676 (63.61%), Query Frame = 2
Query: 449 RLESWEFPGWGSHFRMISPPELETHSFDEGSGA--------EKLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAF-FHVTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWTGNCL----GIHEPNG--IDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIA-LKIASATGFGSVSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVS----------------------------VDPESTQ--ITNLAKQIEMFDTMYPKIKISLLTITG-TFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 2335
R+E WE P G + + +++ GA KLGE ATAI GNDILSS LYV+ VT A +PVCLA+VAG+L+LY+ IYGE+I+A+ MNGG+YNVLIN TSKPVA+ AACLAVISYIATGVVSA TA+SYLQ+LVP + L+T + L FA L GI ESA A+ +F+ H+FTL++ + + L NL P + ++ ++ G+ TAL FG + MLGVSGFESSSQFVEEQA GVFVKTLRNM +GVA FNP + L+SLCVLPM ++ + K +LA++ ++ G+W + L GI + LG V F+V +DAFVVL GAVLT YVGI GL RMA D VLP+ +L KN+WRGT HN FFLL+ SQV++L G+++ LSGVYTFAFLG+M F +GTIMLKFKRPSLPREV ++Y A G ICV+ F+GN++ K VS+F Y G+VIV+ FQRVRL+K+ L + S S + LK+ I E++ P +F K ADLYV+NKA+LY+R NE T+ L+ HV+ VD ++ + ++ + M D MYPK+KIS L + G T+ ++++W++ + G+ KNK I C D+ K+ GG+R++TH
Sbjct: 38 RMEHWEIPALGGYKVTL---DVDAAGLRAAGGAVRERVDTGHKLGELEATAICGNDILSSCLYVASQVTESAGMFAPVCLALVAGILWLYKGIYGESITAISMNGGSYNVLINTTSKPVAATAACLAVISYIATGVVSATTAISYLQVLVPDLPLITGVVVLHAFFALLNAWGIGESARVAMLIFVLHLFTLSLFVLLGLVFVVGAQGGHLWANLAAPLPAVEITSLIIPGNMLTALFFGTCTGMLGVSGFESSSQFVEEQAPGVFVKTLRNMWLGVAFFNPVISLISLCVLPMTDVKKAKGNLLAVVTQKAGNWLQDALSSIAGIPRVSNSRTTLGGVLQFFVCVDAFVVLCGAVLTGYVGINGLACRMASDGVLPEFLLHKNRWRGTTHNTTLVFFLLSASQVIMLHGDVSGLSGVYTFAFLGVMTCFGVGTIMLKFKRPSLPREVHITYAHASLGVICVLATFLGNLMGKSDYVSYFSFYLCGVGIVIVIMFQRVRLMKLLYLVLRSLFPRSSFAGLKNIISELRSGPMIFFAKHADLYVLNKAVLYMRDNEQTNELIFAHVTPLRDGKQGTFAWLTGFSLDASAEDLLENVDADTLREDVSKMEIAARMLDEMYPKLKISFLCVQGATWGADVVEWIAMKTGIDKNKMMIACPDAAVPDKLVAFGGIRIVTH 710
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: A0A1E7ERC1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERC1_9STRA) HSP 1 Score: 542 bits (1397), Expect = 1.350e-177 Identity = 298/648 (45.99%), Postives = 418/648 (64.51%), Query Frame = 2
Query: 440 SRVRLESWEFPGWGSHFRMISPPELETHSFDEG-----SGAEKLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPS---VGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAFFHVTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWTGNCLGIHEPNGIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKI------ASATGFGSVSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVITH*D 2341
SR + ES +F G+GS+ +P + S D G +KLGE ATAISGNDILSS YVSGLV+ A L+P+CL +V VLYL+R IY E + ALP NGG YN+L+N TSK AS AA A+I+YI TGVVSA A++YLQ ++P + TI LLF F L +G+SESA A +F+ HV L++L + Y F+ L EN +P + +G ++TG++FTA+ +GFSSAMLGVSGFE+SSQFVEEQA GVF KTL+NM VGV +FNP + L+S +P+ EI+ K +LA MA+ VG W CL I E + + LG +FSF +S+DAF+VL+ A+LT YVGI GLI RM+ DR LPQ L N W GT I+ GFFLL SQV++L ++ L GVY +AFL +M +F++G I+LK KRP+LPRE+T S+ +I G + V+ A +GN++ KP +++F +YF++ G ++++ FQR + ++ +I A T + ++ D + QD PFVF K DL++ NKA+LY+R NE T++++ VH + T +NL +++ D +YP+IKISLL + FN ++WLS+ + V N FI+C D F K +L G+R+IT D
Sbjct: 30 SRKKYESHDFAGYGSYDVKTTPSVSDIQSIDHSFHEKEQGEKKLGELEATAISGNDILSSTFYVSGLVSTSAGKLAPLCLTLVGFVLYLFRGIYHETVMALPCNGGTYNILLNCTSKQTASIAAVFAIIAYITTGVVSAIEAIAYLQTILPEDCQIDQQIATIALLFFFCLLTNLGMSESAFVAKSIFVIHVAVLSLLTILGVIYTIFNSELLFENWETPYPSVDAAGEVLTGTFFTAIFYGFSSAMLGVSGFETSSQFVEEQAAGVFPKTLKNMWVGVMVFNPLLSLVSFAAMPLQEIMDNKDTVLARMARVVGEWFQGCLFIPE-HYVSLGSLFSFIISVDAFIVLAAALLTGYVGINGLIRRMSMDRCLPQFFLISNPWTGTDSFILCGFFLLCVSQVILLDSDVEALGGVYCYAFLTVMTIFALGNILLKIKRPTLPREITTSWLQSILGLVSVVIALLGNILGKPELLTYFFVYFLIIGTLVLVMFQRTQKTNLSFQIYTTMILALTTKKREIITIADTVKNFQDIPFVFFVKHDDLHMANKAVLYIRKNEQTNKIIFVHCNGTSTETSTSNLQDHVKLLDLLYPRIKISLLVVNSNFNATTVEWLSRSIEVPINAMFISCPDENFSIKKSQLRGIRIITSND 676
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: T0R2F2_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R2F2_SAPDV) HSP 1 Score: 542 bits (1396), Expect = 1.380e-177 Identity = 328/657 (49.92%), Postives = 422/657 (64.23%), Query Frame = 2
Query: 422 LSRSIS-SRVRLESWEFPGWGSHFRM-ISPPELETHSFD-EGSGAEKLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAY-AFFHVTTLHENLLE-GFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWTGNCLGIHEPNGIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKIAS--------------ATGFGSVSSLKDQIHEIQDE-PFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVIT 2332
L RS+ + L+ W+FPGWG + + P EL + + KL EW ATAI GNDILSS LYVSGLVT A L+PV LA+VAG+LYLYRFIYGE ++A+PMNGG+YNVL+N TSK VAS AA LA++SYIATGVVS +A +YL P++ ++ +IGLLF FA L ++GISESA ALG+F+ H TL LCV S Y + + L++NL E FPD+ V+G+ VTG FTAL FG S+AMLG+SGFESSSQFV+EQA GVF KTL+NM GVAIFNP + LLSL V+PM I K+ +L+ MA VG G VSLDAF+VLSGAVLTAYVGI GL+ R+A D +LP ++++N R T H I+FG+F +ATS VL+L+GN+ TLSGVYT+AFLGLM LF G ++LKFKR L R+V + I G VI AF GN+ P +++F LYF LV+ L F+R+ L++A+ + ATG ++ + I + P VF CKQADL INKAILYVR NE TSRL++VHV D E+ + I MFD +YPK+KI L+ + F P LI+W++ E + KN FI + + I LGGVR+IT
Sbjct: 27 LQRSLHPTHANLKPWDFPGWGKYINTEVKPEELRAIDAELKKREHPKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSIGLLFFFAVLTSMGISESAIFALGIFILHTITLVTLCVMSMLYMSRDNFAILYDNLFETSFPDVNVAGTWVTGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNMWWGVAIFNPLISLLSLGVMPMANINMVKNTVLSQMALVVG-----------------GPTLQTIVSLDAFIVLSGAVLTAYVGINGLVRRLASDHILPAFLMQENSCRRTNHWILFGYFGVATSLVLVLEGNVETLSGVYTYAFLGLMTLFGSGCMLLKFKRADLKRDVIAPWWACILGVSLVIVAFFGNLCGDPTILTYFALYFSCVLLVVFLMFERLFFLRLAMYVLQRICPSTRKEETKPLATGARGGRTIVKAMRRITEACPTVFFCKQADLASINKAILYVRQNEQTSRLVIVHV-YDAETGVPDLFGESIVMFDKIYPKLKIDLVAVESVFGPALIEWVATEYSIPKNMMFIKQPSAEATFNIASLGGVRIIT 665
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: A0A6A3ZJ44_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3ZJ44_9STRA) HSP 1 Score: 535 bits (1378), Expect = 2.320e-174 Identity = 318/650 (48.92%), Postives = 419/650 (64.46%), Query Frame = 2
Query: 452 LESWEFPGWGSHFRMI-SPPELETHSFDEGSGAEKLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAFFH-VTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDE---IVRYKHFMLAIMAKRVGSWTGNCLGIHEPNGIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKI-----------------ASATGFGSVSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQ-IEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVIT 2332
L+ WEFPGWG + + S EL + KL EW ATAI GNDILSS LYVSGLV A L+P+ LA+VAG+LYLYRFIYGE ++A+P+NGG+YNVL+N TSK VA+ AA LA++SYIATGVVS +A +YL VPS+ ++ TIGLLF+FA L +GI+ESA AL +F+AH TLTVLCV SA Y + TLH N FPDI ++G +++G++ TA+ FG S+AMLG+SGFE+SSQFVEEQA+GVF KTLRNM GVAIFNP + LLSL VLP+D IV K+ +LA M +V GE V+LDAF+VLSGAVLTAYVG+ GL+ R+A DRV+P+ +L NK RGT H II G+FL+ATS VLIL G+ TLSGVYT+AFLGLM LF +G ++LKFKR +PR V + + + G V+T F+GN++ P +++F LYF+ ++ + F+R LL++ L + TG ++ I EI + F CK +L +INKAILYVR NE T L +VH P T + K+ + MFD +Y KIK++ L++ G F P +++W+S++ KN FI + F + I LGGVRVIT
Sbjct: 43 LKGWEFPGWGDNLSAVASESELNEIQAHQSVDHTKLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPLALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATIGLLFIFAALSLIGITESAVVALVIFVAHAATLTVLCVLSAVYVWNDGFQTLHANFSTDFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQAEGVFPKTLRNMWWGVAIFNPMISLLSLGVLPLDGPGGIVDKKNTVLAEMGLKVA-----------------GENMQLVVALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPEFLLHVNKTRGTNHFIIIGYFLVATSLVLILHGDTETLSGVYTYAFLGLMTLFGIGCMLLKFKRAEIPRSVIAPWWSCVLGVSMVVTTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMCLYCMRQLCPSQRSIDEDETHSLRTGARGGQTIARFIREINEPAVFFFCKTPNLNIINKAILYVRTNEQTHTLYIVHCH--PRGTPVPEGFKETVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYSQPKNLMFIKQPNHDFAHTIASLGGVRVIT 673
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: A0A1V9YA40_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA40_9STRA) HSP 1 Score: 534 bits (1375), Expect = 2.330e-174 Identity = 330/690 (47.83%), Postives = 430/690 (62.32%), Query Frame = 2
Query: 365 LGGNSRSRVVSYDAASSLG-----------LSRSIS-SRVRLESWEFPGWGSHFRMISPPELETHSFDEGSGAE--KLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAY-AFFHVTTLHENLLE-GFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWTGNCLGIHEPNGIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKIAS-----------------ATGFGSVSSLKDQIHEIQDE-PFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGGVRVIT 2332
+ G+SR V + A S G L RS++ + L+ W+FPGWG + P + DE E KL EW ATAI GNDILSS LYVSGLVT A L+PV LA+VAG+LYLYRFIYGE ++A+PMNGG+YNVL+N TSK VAS AA LA++SYIATGVVS +A +YL P++ ++ ++GLLF FA L ++GISESA ALG+F+ H TL LCV S + + + + L++NL FPD+ V+GS V+G FTAL FG S+AMLG+SGFESSSQFV+EQA GVF KTL+NM GVA+FNP + LLSL V+PM I +K+ +LA MA VG G VSLDAF+VLSGAVLTAYVGI GL+ R+A D +LP ++ +N R T H I+FG+F +ATS VL+L+GN+ TLSGVYT+AFLGLM LF G ++LKFKR L R+V + I G V+ AF GN+ P +++F LYF LV+ L F+R+ L+IA+ + ATG ++ + I + P VF CKQ DL INKAILYVR NE +SRL++VHV D E+ + I MFD +YPK+KI + + F P LI+W++ E + KN FI + + I LGGVR+IT
Sbjct: 1 MAGSSRKTVATSPAKESYGSDSSGAEDSGLLQRSLNPTNANLKPWDFPGWGKYISTEVPADELRLIEDELKKREHPKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSVGLLFFFAVLTSMGISESAMFALGIFILHTLTLIALCVASIIFMSQNNFSILYDNLFHTDFPDVNVAGSWVSGDIFTALFFGTSTAMLGISGFESSSQFVQEQAAGVFPKTLKNMWWGVAVFNPLISLLSLGVMPMANINMFKNTVLAQMALVVG-----------------GPTLQTIVSLDAFIVLSGAVLTAYVGINGLVRRLASDHILPAFLMHENACRRTNHWILFGYFGVATSLVLVLEGNVETLSGVYTYAFLGLMTLFGSGCMLLKFKRADLKRDVIAPWWACILGVSLVVLAFFGNLCGDPTILTYFALYFSCVLLVVFLMFERLFFLRIAMYVLQRLCPSRRAQPPTETTTLATGARGGRTIVKAMRRITEACPTVFFCKQPDLPSINKAILYVRQNEQSSRLVIVHV-FDAETGVPDLFGESIVMFDRIYPKLKIDFVAVQSIFGPALIEWVATEYSIPKNMMFIKQPSADAAFNIASLGGVRIIT 672
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Match: A0A4D9CZ99_9STRA (SET domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ99_9STRA) HSP 1 Score: 541 bits (1394), Expect = 3.810e-174 Identity = 304/638 (47.65%), Postives = 418/638 (65.52%), Query Frame = 2
Query: 434 ISSRVRLESWEFPGWGSHFRMISPPELETHSFDEGSGAE---KLGEWYATAISGNDILSSVLYVSGLVTGCASWLSPVCLAMVAGVLYLYRFIYGEAISALPMNGGAYNVLINATSKPVASFAACLAVISYIATGVVSAATAVSYLQMLVPSVGLMTCTIGLLFMFACLVTVGISESAGAALGMFLAHVFTLTVLCVTSAAYAFFHVTTLHENLLEGFPDIMVSGSMVTGSWFTALLFGFSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQVGVAIFNPAVCLLSLCVLPMDEIVRYKHFMLAIMAKRVGSWT--GNCLGIHEPN----GIDLGEVFSFWVSLDAFVVLSGAVLTAYVGITGLISRMAKDRVLPQIMLKKNKWRGTQHNIIFGFFLLATSQVLILQGNITTLSGVYTFAFLGLMALFSMGTIMLKFKRPSLPREVTVSYKTAIFGTICVITAFIGNMISKPYAVSWFILYFMVFGLVIVLGFQRVRLLKIALKIASATGFG-SVSSLKDQIHEIQDEPFVFLCKQADLYVINKAILYVRGNEHTSRLLVVHVSVDPESTQITNLAKQIEMFDTMYPKIKISLLTITGTFNPELIDWLSKELGVLKNKFFITCLDSVFKYKIQELGG 2317
+S++ +E+W FPGWG + ++ + E + KL +W ATAI GNDI++S YV GLVT A ++P+ L +V+ VLYL RF+Y EAI+ALPMNGG++NVL+N+TSK +AS AA LA++SYIATGVVSA +AV YL+ +V + +GLLF+FA LV +GI ESAG A +F H+ TLT+LC S Y +TL EN +PD+ + G + +GS+ TA+ FG++SA+LGVSGFESSSQ+V+ QA GVF+KTLRNM VGV +FNP + LSL VLP+ IV + +LA MAK+VG W G G+ G+ G WVSLDAF+VLSG++LTAYVG+ GLI RMA DR LPQ +L++N WR T HNII G+ + + VLIL+GN+T LSGVY+ AFL ++ LF++GT++LKFKRPSLPR+VTVS+ + + ++ +GN++ P + F+ Y G +++L FQ LL+ + + G L+ ++ Q P +F CK D+YV+NKA+LYV NE + L+V+HV D + L+ +E FDTMYPKIK +LLTI G F P LI++L +EL V N FI D FKYK+ +LGG
Sbjct: 67 LSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQRQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHILTLTLLCACSTVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQYVQSQAPGVFLKTLRNMWVGVFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKQVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLQRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVH-DKDHFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGG 703 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig804.19437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig804.19437.1 >prot_F-serratus_M_contig804.19437.1 ID=prot_F-serratus_M_contig804.19437.1|Name=mRNA_F-serratus_M_contig804.19437.1|organism=Fucus serratus male|type=polypeptide|length=700bp MNAVGKDQGSENDALLGWVRPKSDKLRGGSGVGKTANFTEGPLGGNSRSRback to top mRNA from alignment at F-serratus_M_contig804:135438..154655+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig804.19437.1 ID=mRNA_F-serratus_M_contig804.19437.1|Name=mRNA_F-serratus_M_contig804.19437.1|organism=Fucus serratus male|type=mRNA|length=19218bp|location=Sequence derived from alignment at F-serratus_M_contig804:135438..154655+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig804:135438..154655+ >mRNA_F-serratus_M_contig804.19437.1 ID=mRNA_F-serratus_M_contig804.19437.1|Name=mRNA_F-serratus_M_contig804.19437.1|organism=Fucus serratus male|type=CDS|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig804:135438..154655+ (Fucus serratus male)back to top |