mRNA_F-serratus_M_contig800.19408.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Match: A0A6H5KJ14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ14_9PHAE) HSP 1 Score: 345 bits (885), Expect = 4.210e-95 Identity = 311/938 (33.16%), Postives = 419/938 (44.67%), Query Frame = 1
Query: 934 AQIFKSWSTVVSANKQREHNVRAFGRRVKNRQ------------RLYLLKNVFRELRRQTI--EASSSRKLASRELAR--------------------VERARTMINLNLSRSVIERLKEAVKFRKVQEFKAKLRFKRWAYRH-------VMKYWKNWVELKAGRFERRATTGHNTRMGNRYNRKKRAAFTRRQELLPVFRAWAAKSAQLTTATRMHTGKLSRVAKDAFERWRAETIKSKQIKKMTPAIRVKNSPCELGESFRMWYIYAQVSKRKSEEHERLLRLIRRAKNRKKCHNILRTWRHL-------AVYGRVYGLYTRSQLIRSLAEQKEHTLRHVEKVDGLASELRKMKVGRRFGPVDGSYYTKSCNALPNHNSWERAGIMRTTPSSTYAHGWGSVSVGNQELAMKYRSQMVVDQRESSERQIGFDRQTSPRHQAKEEILRLQSLLSPAATVGPCIPLCEPLSQA--GVETIKCKEEMEALATGRKQPQETSPMGKTYESTXXXXXXXXXXXXXXXXXTHAPLSQPTPLNLQSLVNPTGNFPMKAIARVSTADAEIQARLPPDXXXXXXXXXXXXALAAGTEPPLLPRELVRLDRVEWVLRRSGFVEIVSRLKQRQQNLEGNKQKLPYS---------------------------SISECSPRRSFGDAGVGELGEARGVRVD----AISGV-RVGAGG----LCND---NRPNGQEAINSASRSSAAADATXXXTSVRPSRPSISPADIGGEDEESKKDNDDVGGLLDRLVSIFEFLRSGNSLLLPSNLRMEWESRPDLGLGLLAADDHV------FDPRPDASSTVSA------GQSAQGTNRALKESQNSSPKDGNWACGGASGVSSGEISSW-NILCQEQREGGGGPLTYQDLQVMLRAFTDRRHRTEGMGAGLQGGLVETRLRTE 3441
++IF+ WSTV+ AN+QR + ++ F RVK RQ + L +F EL R+ + + + ++ R +AR VE R + +NL RSV RL +AV RK +E A+ FKRWA R V+K W+ W LKA +R+ TG+ R N K AAFTRR+E++ VF AW+ KSAQL ATRM KL++V AF W+AET KSKQ+KK+ + S +LGE FRMWYIYA SK++++EHERLL+L RR KNR+K H IL+ W+HL AVYGR+ G+YTRSQL+ SLAEQK+HTLR V KVD LA L M+ ELAM+YRSQM++ QRE++ER+ G DRQT H A++E++RLQSLL+ AA P I C+ + + G + + + E +K Q P AD E AR ++ G EPP+LP+EL RLDRVEWVLRR+ E+ +RLK +++ EG + + + +I C G G L G D AISG +G GG + +D P + + A+ + A D T R + +P G E+ + DRL IFEFLRSGNSLLLP +LR++WESRPDLGLGLLA DDH F P P AS + A S+ S+W LC+E G G P+TY DL++ L A + +E L+ L E R R +
Sbjct: 675 SKIFRMWSTVIGANEQRNYRLKMFEERVKRRQVDIFSRYVNRVLQSVCLPKMFGELARRGLRRQQEARERVVKRAVARGELGLYVTDAMVRQEMSRQAVELMRGKVGVNLCRSVFTRLGQAVVLRKKREVTARAHFKRWATRQADLRILRVIKGWRKWAALKAEGMDRKLMTGYRGGERLRCNTHKVAAFTRRREMVGVFLAWSRKSAQLAIATRMQRKKLTQVVMGAFNTWKAETQKSKQVKKIAVGMWADFSLKDLGEPFRMWYIYADYSKKQTKEHERLLKLHRRYKNRRKTHIILKAWKHLVVGKGFKAVYGRIEGMYTRSQLMSSLAEQKDHTLRLVGKVDELAGGLGDME----------------------------------------------------ELAMEYRSQMIIRQRETTERENGMDRQTMALHHAEQEVVRLQSLLASAAEAAPHI--CKAIHKVAPGFDFKERGLQGEFRCEIKKLEQAWLP----------------------------------------------------------ADPEAAARAAVAAAALAQASGTHLSVVCGIEPPILPKELARLDRVEWVLRRTSAAEVGTRLKAQRE--EGERIERGHGGXXXXXXXXXXXXXXXXXXXXXXSGGINIQICGDVNGGGSTNSGSLTGGVGDEADDGGKAISGTYAIGGGGAPATVSSDVSFPSPTSEAVADVATATVAPPDPDGLSTGRSEGRAAAAPL-TGAAVEDDXXXXXXXXDVADRLAGIFEFLRSGNSLLLPPDLRIDWESRPDLGLGLLAGDDHKDDVVRRFHPAPSASWSQPAEADGARSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGASTWARGLCRETSIGSGEPMTYHDLRMALTASAPKGRLSETTNDMLERRLAERRSRAD 1497
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Match: D8LGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGX0_ECTSI) HSP 1 Score: 278 bits (712), Expect = 4.960e-77 Identity = 234/707 (33.10%), Postives = 311/707 (43.99%), Query Frame = 1
Query: 1492 AFERWRAETIKSKQIKKMTPAIRVKNSPCELGESFRMWYIYAQVSKRKSEEHERLLRLIRRAKNRKKCHNILRTWRHLAVYGRVYGLYTRSQLIRSLAEQKEHTLRHVEKVDGLASELRKMKVGRRFGPVDGSYYTKSCNALPNHNSWERAGIMRTTPSSTYAHGWGSVSVGNQELAMKYRSQMVVDQRESSERQIGFDRQTSPRHQAKEEILRLQSLLSPAATVGPCIPLCEPLSQAGVETIKCKEEMEALATGRKQPQETSPMGKTYESTXXXXXXXXXXXXXXXXXTHAPLSQPTPLNLQSLVNPTGNFP--------MKAIARVSTADAEIQARLPPDXXXXXXXXXXXXALAAGTEPPLLPRELVRLDRVEWVLRRSGFVEIVSRLK-QRQQNLEGNKQKLPYSSISECSPRRS------------FGDAGVGELGEARGVRVDAISGVRVGAGGLCNDNRPNGQEAINSASRSSAAADATXXXTSVRPSRPSISPADIGGEDEESKKDNDDVG-----------------------------GLLDRLVSIFEFLRSGNSLLLPSNLRMEWESRPDLGLGLLAADDHV------FDPRPDASSTVSAGQSAQGTNRALKESQNSSPKDGNWACGGASGVSSGEISSW-NILCQEQREGGGGPLTYQDLQVMLRAFTDRRHRTEGMGAGLQGGLVETRLRTE 3441
AF+ W+AET KSKQ+KK+ + S +LGE FRMWYIYA SK++++EHERLL+L RR KNR+K H IL+ W+HLAVYGR+ G+YTRSQL+ SLAEQK+HTLR KVD LA L M+ ELAM+YRSQM++ QRE++ER+ G DRQT H A++E++RLQSLL+ AA P + C+ + + + ++ RK+ E + E + P N + N A V TADA+ QA LP D ALA G EPP+LP+ELVRLDRVEWVLRR+ E+ +RLK QR++ G + G+ G + + G G +D G +AI+ + + V P D D + + DRL IFEFLRSGNSLLLP +LR++WESRPDLGLGLLA DDH F P P AS S +A G + Q+ + G+ GG S S+W LC+E G G P+TY DL++ L A + +E L+ L E R R +
Sbjct: 3 AFDTWKAETKKSKQVKKIAVGMWADFSLKDLGEPFRMWYIYADYSKKQTKEHERLLKLHRRYKNRRKTHMILKAWKHLAVYGRIEGMYTRSQLMSSLAEQKDHTLRLAGKVDELAGGLGDME----------------------------------------------------ELAMEYRSQMIIRQRETTEREDGMDRQTMALHHAEQEVVRLQSLLASAAEAAPQV--CKAIHKVAPGFDFKERGLQPFTDARKEALEMETEQRVQELVAQRMALQAAAANGHEHASGRLAGAPNSARGMDPSNASANSSEGNARKGQAAAAPVVITADAKTQAWLPADPEAAARAAVAAAALAQGIEPPILPKELVRLDRVEWVLRRTSVAEVGTRLKAQREEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGINIQICGDVSGGGSTSSGSLTGGVGAGADD----GGKAISGTDTNGGXXAPAAVSSDVSFPSPXXXXXXXXXXXXXXPPDPDGLSTGRSEGRAAXXXXXXXXXXXXXXXXXXXXDVADRLAGIFEFLRSGNSLLLPPDLRIDWESRPDLGLGLLAGDDHKDDVVRRFHPAPSAS--WSQPSAADGARSSSSPQQHRGAESGSSKSGG----SGKGTSTWARGLCREASIGSGEPMTYHDLRMALSASAPKGRLSETTNDMLERRLAERRRRAD 645
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Match: A0A7S1UM87_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UM87_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.640e-10 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1594 FRMWYIYAQVSKRKSEEHERLLRLIRRAKNRKKCHNILRTWRHLAVYGRVYGLYTRSQLIRSLAEQKEHTL 1806
FRMWY+Y KR ++ RL+ L +R K R ILR WRHLAVYGRV G+YTR++L++SLAEQ+E L
Sbjct: 639 FRMWYVYKAKRKRVRQDRNRLVALYQRVKTRGLLSKILRAWRHLAVYGRVEGMYTRTKLMKSLAEQQEVAL 709
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Match: A0A482RZ80_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ80_9ARCH) HSP 1 Score: 67.4 bits (163), Expect = 9.570e-8 Identity = 78/319 (24.45%), Postives = 133/319 (41.69%), Query Frame = 1
Query: 940 IFKSWSTVVSANKQREHNVRAFGRRVKNRQRLYLLKNVFRELRRQTIEASSSRKLASRELARVERARTMINLNLS------------------RSVIERLKEAVKFRKVQ-EFKAKLRFKRWAYRHVMKY---------------WKNWVELKAGRFERRATTGHNTRMGNRYNRKKRAAFTRRQELLPVFRAWAAKSAQLTTATRMHTGKLSRVAKDAFERWRAETIKSKQIKKMTPAIRVKNSPCELGESFRMWYIYAQVSKRKSEEHERLLRLIRRAKNRKKCHNILRTWRHLAVYGRVYGLYTRSQLIRSLAEQK 1794
+ W+ + N H VR + +R LLK VF L +I + S++ +R R+ ++ +L R V+E+ E K ++ +F A ++ K+ A +H W + V L + + +R+ G + RYN+K+ F++ + V+ AW A A R K ++ F WR+ + ++K T + F+ W + + K EH R+ R RR K R+K I++ WRH A++GR+ GLY+R L++SL EQK
Sbjct: 27 FYSKWAFIYRQNAPMRHAVREAALMKVDSKRKALLKMVFDGLHAVSIGSMSTKNAILERRKLTDRIRSDLSADLQDLGLVGIVPEDEVFRVLHRKVVEQFHERKKIITMRAKFGAFIKLKQIAVKHEQTARRHRFKKLAGKCFYAWSDHVYLTSRQLDRKRWPGPR-KYEVRYNQKRVDFFSKVRCERFVYSAWKAYFAVQLQVKRRFQRKKAQFIMSVFSGWRSIARHQRALRKKTYENWKGYAKLITSSPFQAWADFVKGQKNLYNEHLRIARSYRRWKTRQKVAEIVKRWRHQALFGRIDGLYSRQMLLKSLGEQK 344
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Match: F0YIQ7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIQ7_AURAN) HSP 1 Score: 64.3 bits (155), Expect = 1.570e-6 Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1582 LGESFRMWYIYAQVSKRKSEEHERLLRLIRRAKNRKKCHNILRTWRHLAVYGRVYGLYTRSQLIRSLAEQKEH 1800
LG R WY++ + + + + RL+ RA+ R+ ++R W H A+YGRV GLYTR++L+RSLAE + H
Sbjct: 619 LGRPLRAWYLFTRTRRIRRMDQRRLVATHARARERRLRQKLMRAWHHQAIYGRVEGLYTRAELVRSLAELQAH 691
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Match: A0A8J2SKR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKR4_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.470e-6 Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 1378 FTRRQELLPVFRAWAAKSAQLTTATRMHTGKLSRVAKDAFERWRAETIKSKQIKKMTPAIRVKNSPCELGESFRMWYIYAQVSKRKSEEHERLLRLIRRAKNRKKCHNILRTWRHLAVYGRVYGLYTRSQLIRSLAEQKEHTLR 1809
F R+ + P ++ W A T+ + R + WR ++++ ++ +I + S L R WY +++ + + RL+ A+NR+ +R W H AVYGRV GLYTR++L+RSLAE + H R
Sbjct: 375 FIRKHIVGPCWKHWYAYYRARTSQHALQACAAQRSLLAHWSHWRRAAAHRRKLRSLSVSIWQETSHQLLSRPLRAWYTHSRKVRSRRRAQNRLVTAHVCARNRRLRLRFMRGWHHQAVYGRVEGLYTRAELVRSLAELQAHARR 518
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Match: A0A7S3XQH1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH1_HETAK) HSP 1 Score: 57.0 bits (136), Expect = 1.730e-5 Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 1642 EHERLLRLIRRAKNRKKCHNILRTWRHLAVYGRVYGLYTRSQLIRSLAEQKE 1797
+ RLLR R R+ ILR WRH AVYGR+ G+YTR +L+RSLAEQKE
Sbjct: 4 DQARLLRAHARMTVRRTLWKILRAWRHQAVYGRLEGMYTRRELVRSLAEQKE 55 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig800.19408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig800.19408.1 >prot_F-serratus_M_contig800.19408.1 ID=prot_F-serratus_M_contig800.19408.1|Name=mRNA_F-serratus_M_contig800.19408.1|organism=Fucus serratus male|type=polypeptide|length=1128bp MSPTCITSTSRHRLPVDLPLDKSLEEVILAVKNSSAASFFSIYKRKPYFVback to top mRNA from alignment at F-serratus_M_contig800:23512..40247- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig800.19408.1 ID=mRNA_F-serratus_M_contig800.19408.1|Name=mRNA_F-serratus_M_contig800.19408.1|organism=Fucus serratus male|type=mRNA|length=16736bp|location=Sequence derived from alignment at F-serratus_M_contig800:23512..40247- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig800:23512..40247- >mRNA_F-serratus_M_contig800.19408.1 ID=mRNA_F-serratus_M_contig800.19408.1|Name=mRNA_F-serratus_M_contig800.19408.1|organism=Fucus serratus male|type=CDS|length=6768bp|location=Sequence derived from alignment at F-serratus_M_contig800:23512..40247- (Fucus serratus male)back to top |