mRNA_F-serratus_M_contig80.19397.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: D7FWH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH7_ECTSI) HSP 1 Score: 140 bits (354), Expect = 3.360e-38 Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1
Query: 154 ATAPKPSHETVKTRKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
A+A KP + K RKKG+SVACPIAYGSLAFLLERKKQSE++THKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR + P
Sbjct: 2 ASASKPPADVPKIRKKGLSVACPIAYGSLAFLLERKKQSEFVTHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREITSP 84
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: F0Y5R3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R3_AURAN) HSP 1 Score: 97.1 bits (240), Expect = 2.210e-22 Identity = 46/70 (65.71%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 193 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
RKK +V CP+ YGS+AF L RK EY THKWTLFVRGP+GED+ YFV KVVF LHPSFA+ R EP
Sbjct: 1 RKKNTAVCCPLVYGSVAFWLGRKAD-EYHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREIHEP 69
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: A0A7S3ZZU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZU1_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.340e-19 Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 193 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
R K +V CP+ YGSLAF L RK E+ THKWTLFVRGP+GED+ YFV KVVF LHPSFA+ R ++P
Sbjct: 36 RVKDAAVCCPLVYGSLAFWLGRKAD-EFHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREVTKP 104
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: A0A6U3QEB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QEB4_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 7.960e-18 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 211 VACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
+ CPI YGS+A L RK + TH+WTLFVRGPNGED++YF+SKVVFTLHPSFA+ R +P
Sbjct: 11 IHCPIVYGSIAHWLGRKADEAH-THRWTLFVRGPNGEDLTYFLSKVVFTLHPSFAQPVREIFQP 73
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: A0A8J9X9H2_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X9H2_PHATR) HSP 1 Score: 80.5 bits (197), Expect = 2.160e-16 Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 193 RKKGISVAC-PIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
R+ + AC PI YGS+AF L KK EY TH+WTL +RGPN ED+S +SKVVF LHPSF++ TR +EP
Sbjct: 1 RRMEHTTACLPIVYGSVAFYLG-KKADEYNTHQWTLHLRGPNNEDLSPVISKVVFHLHPSFSQPTRELTEP 70
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: A0A7R9Y9J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J6_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.100e-16 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 193 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
R+K V CPI YGS+AF + KK E+ TH+WTL+VRGPN ED+ YF+ KVVF LH SFA R P
Sbjct: 12 RRKNTLVCCPIVYGSIAFWMG-KKADEHSTHQWTLYVRGPNDEDLGYFIDKVVFVLHHSFANPERELRAP 80
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: A0A835ZJW2_9STRA (Yeats family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW2_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.050e-16 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 193 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSE 399
R G++V CP+ +G +AFLL K E TH WTL+VRG +GEDISYFVSKVVFTLH SF TR +E
Sbjct: 11 RMSGVTVCCPVVFGCVAFLLG-KDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTE 78
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: A0A1Z5KJV7_FISSO (YEATS domain-containing protein 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJV7_FISSO) HSP 1 Score: 81.3 bits (199), Expect = 3.900e-15 Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 187 KTRKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
+TR++ V P+A GS+AF L K ++ TH+WTL+VRGP+GED+S + KV+F LHPSFA+ TR +EP
Sbjct: 11 ETRRENTIVCLPVATGSIAFYLGNKSDTQ--THEWTLYVRGPSGEDLSVVLEKVIFQLHPSFAQPTRELTEP 80
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: C1EEG0_MICCC (YEATS domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEG0_MICCC) HSP 1 Score: 79.7 bits (195), Expect = 6.280e-15 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 193 RKKGISVACPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATRGKSEP 402
RKK + PI YG+ A+ L KK EY +HKWT+++RGP ED+S+ +SKVVF LHPSF EA R +P
Sbjct: 20 RKKDTELVVPICYGTCAYWLG-KKADEYHSHKWTVYLRGPENEDLSHVISKVVFNLHPSFKEAQRTLEKP 88
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Match: A0A7S3GNA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GNA1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.090e-14 Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 217 CPIAYGSLAFLLERKKQSEYITHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATR 387
CPI YGS+A L KK EY TH+W L++RGPN ED+S FV KV FTLHPSFAE R
Sbjct: 2 CPIVYGSVAVHLG-KKSEEYSTHRWKLYIRGPNNEDLSTFVEKVAFTLHPSFAEPVR 57 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19397.1 >prot_F-serratus_M_contig80.19397.1 ID=prot_F-serratus_M_contig80.19397.1|Name=mRNA_F-serratus_M_contig80.19397.1|organism=Fucus serratus male|type=polypeptide|length=136bp MKVELGAIDNTKAGQHSAQATNGTAGDGTAGAGFTSQEAEASVGGSAGGTback to top mRNA from alignment at F-serratus_M_contig80:808927..810982- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19397.1 ID=mRNA_F-serratus_M_contig80.19397.1|Name=mRNA_F-serratus_M_contig80.19397.1|organism=Fucus serratus male|type=mRNA|length=2056bp|location=Sequence derived from alignment at F-serratus_M_contig80:808927..810982- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:808927..810982- >mRNA_F-serratus_M_contig80.19397.1 ID=mRNA_F-serratus_M_contig80.19397.1|Name=mRNA_F-serratus_M_contig80.19397.1|organism=Fucus serratus male|type=CDS|length=816bp|location=Sequence derived from alignment at F-serratus_M_contig80:808927..810982- (Fucus serratus male)back to top |