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Homology
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: D7FWI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWI2_ECTSI) HSP 1 Score: 354 bits (908), Expect = 3.210e-109 Identity = 295/471 (62.63%), Postives = 336/471 (71.34%), Query Frame = 2
Query: 281 EASSDELVATIQGHDRFFSLMLDMIPESLVLPVKQVLEPSYASKYMKNKKDNAPQQSKKEESKKNKRARYAADNQKTVSERQQERAREEARDGVDGEHGGEDED---------GSGAEVEEGGLEPEAIRGKTMDVTSMDALKRKIQDRISAMRQKRVATEGGRRAKTSEKRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQPK--AAGTHVSVPRAKPEALRPVAEPQLPPLPTIEDVGDMEFSGLRGVIGRSDSEKRRP--PKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAGRGDATESAGDKRRRRAGFEGKKNDFINKEK-TRGGVKNGGXXXXXXXXXXXAGKAVGGRG 1651
E+ DELVATIQ HD FFS MLDMIPE+LVL K+V E SYASKYMKNKK AP+QSKKEESKKNKRARYAADNQKT+ E+QQERA+ DG D + G + + G A E+ GL+ E +RGK+MDV SMDALK++I++RI ++KR A EG RRAKT+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX K A G+H PVA+PQLPPLPT+EDVGD+EFSGLRGV+G + + PKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT+ GKE A++EGW DAIR+AGG E+KDNP ALKKMIKRKE+EKAKSA KWD RL+GQ+K XXXXXXXX A GDA G KR+RRAGFEGKK DFINKE+ ++ G + GG G A GGRG
Sbjct: 111 ESVEDELVATIQEHDEFFSRMLDMIPENLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKA-GEDGGDADAGSDKDXXXXXXXXXGGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEAXXXXXXXXXXGAKVEANGSHA-----------PVAKPQLPPLPTVEDVGDIEFSGLRGVLGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTETGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDERLSGQRKXXXXXXXXXEENLNRRKKGGPAVGETDKAASGGDAASGQGGKRQRRAGFEGKKQDFINKERPSKAGEQGGGGGR---------GGARGGRG 560
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: B5Y420_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y420_PHATC) HSP 1 Score: 73.6 bits (179), Expect = 4.680e-10 Identity = 61/181 (33.70%), Postives = 88/181 (48.62%), Query Frame = 2
Query: 1037 DVGDMEFSGLRGVIGRSDSEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKE--GKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRL-----AGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAGRGDATESAGDKRRRRAGFEGKKNDFINK 1558
D+ +++F L G+ + + K A SK K L +LA AE K++R+ L+ K+ + ARQ W+D ++ A G+ VKD+P LKK +KRKE +KAKS W R+ A Q ++ A DA E G +R RAGFEG+K DF+NK
Sbjct: 218 DLANLDFGRLAGLNSHTKEHYSKSNKALANLSKTKNLERMLADAEAKRERIEALKACKDESAQAEARQILWKDTLQEADGQRVKDDPMKLKKALKRKEVKKAKSKKAWKSRMENVSDAAQSRQKIRQHNLSARKAGGQSGANLSKKKIA------DAGEDGG-RRLSRAGFEGRKQDFLNK 391
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: A0A1Z5JT82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT82_FISSO) HSP 1 Score: 72.4 bits (176), Expect = 8.680e-10 Identity = 60/181 (33.15%), Postives = 86/181 (47.51%), Query Frame = 2
Query: 1034 EDVGDMEFSGLRGVIGRSDSEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAGRGDATESAGDKRRRRAGFEGKKNDFINKEKTRG 1573
ED+ ++F L G+ S K SK K L +LA AE K+Q+L L++ T+E K A + W D ++ A G+ VK +P +KK++KRK +KAKS W RL K++ + D + +G KR RAGFEGKK DF+N K +G
Sbjct: 191 EDLAKLDFGRLAGLNTTETSNYLAANKALGNLSKTKNLKKMLADAEAKQQKLEQLKKGTEEEKAKAMEMQWSDTLKEADGQRVKSDPSKIKKVLKRKAAKKAKSQKAWKTRLEQVKEKKDERQTIRNHNLDARKKGGAIGANLSKKKIVKDGDQDSG-KRLSRAGFEGKKRDFLNSPKKKG 370
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: K8YSR8_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR8_NANGC) HSP 1 Score: 68.2 bits (165), Expect = 3.370e-8 Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 2
Query: 1139 KRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAGRGDATESAGDKRRRRAGFEGKKNDFINK 1558
K L GLL AEEK++RL L+ T+ GKE A W+DA++ A GE++ DNP LKK IK+KE+ S KW R A + + A + + +S G R+ RAGFEGK+ +F+NK
Sbjct: 328 KNLVGLLKKAEEKEKRLKELQATEGGKEEASALLWKDALKSAHGEKILDNPKLLKKAIKKKEKAXXXSKEKWGDRTAKIEAAEREKQGRREANLKKRKLGGVEGCLAGSKAEKDNKEKSGG--RQGRAGFEGKRAEFLNK 465
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: A0A1E7FHH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.030e-7 Identity = 64/190 (33.68%), Postives = 85/190 (44.74%), Query Frame = 2
Query: 1037 DVGDMEFSGLRGVIGRSDSEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAG-------------RGDATESAGDKRR-RRAGFEGKKNDFINK 1558
D+ ++F L G+ + K SK K L LLA AE KKQRL L+++ E KE A W + I+ A GE VKD+P +KK+++RK +K KSA W +R+ K+ TGA G T+ D RR RAGFEGKK DF+NK
Sbjct: 226 DLSQVDFGRLAGLNPIGNGNYTEVNKALKNLSKSKNLEKLLADAESKKQRLEELKKSGKAEDKEKADNIVWGNVIKEATGERVKDDPAKIKKVLQRKAAKKKKSAKAWKNRMDTTKQNMDERQNIRNHNLNQRKAGGQ------TGANLSSKRIELEGDDKNGGPTKQKNDGRRLSRAGFEGKKQDFLNK 409
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: A0A448ZTA8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTA8_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.770e-7 Identity = 57/182 (31.32%), Postives = 85/182 (46.70%), Query Frame = 2
Query: 1037 DVGDMEFSGLRGVIGRSDSEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAGRGDATESAGDKRRR------RAGFEGKKNDFINK 1558
D+ ++F L G+ + K SK K L +LA AE KK+RL L+Q+ +E KE A W D +R A GE VKD+P +KK +KR+ +K KS+ W R+ + + ++ + TE+ D +++ RAGFEGKK DF+NK
Sbjct: 172 DLAMVDFGRLSGLNPVGNGNYTEVNKALKNLSKSKNLEKMLADAESKKKRLEELKQSDKQEDKEKAASIEWGDTLREATGERVKDDPAKIKKALKRRAAKKLKSSKAWKTRMESAQSKMDERQKIRNHNLTKRKLGGSAGANLSS---KRIETEAEADGKKKTGRRLSRAGFEGKKQDFLNK 350
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: A0A0P1AGU8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGU8_PLAHL) HSP 1 Score: 63.9 bits (154), Expect = 6.000e-7 Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 2
Query: 1127 GSKMKRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLA 1369
G ++ + LL AE QRL L+QT+EGKE + +GW+ A++ A G+ + D+P L+ +K+KE+ K+KSA +W R A
Sbjct: 237 GQSVRAIQNLLKKAERNAQRLEELKQTEEGKEKIKAKGWDSALQHAAGKVLMDDPKLLRSKLKKKEKAKSKSAKEWRERTA 317
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: A0A7S3KW68_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW68_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.480e-6 Identity = 57/178 (32.02%), Postives = 83/178 (46.63%), Query Frame = 2
Query: 1037 DVGDMEFSGLRGVIGRS-DSEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAGRGDATESAGDKRRRRAGFEGKKNDFINKEK 1564
D+ ++F L G+ G S + K SK K LH +LA AE K+ +L L+Q +E A++ W D + A G+ +KD+P LKK++KRK +K KS W R A K+ + R D E G +R RAGFEG+K +F+N +K
Sbjct: 192 DLAQVDFGRLAGLNGSSLQKNYEQSNKALQNLSKSKNLHKMLADAEAKRAKLEELKQGDEEAVAKAQKLLWSDTFKEADGQRIKDDPSKLKKVLKRKAAKKVKSQKAWQSRTAQVDKKAQDRQKIRQHNLQARKQGGAAGANLSKKEIRKD--EDPG-RRLSRAGFEGRKREFLNGDK 366
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: A0A7S4ATI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATI7_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.930e-6 Identity = 56/181 (30.94%), Postives = 83/181 (45.86%), Query Frame = 2
Query: 1037 DVGDMEFSGLRGVIGRSDSEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKE--GKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGA----GRGDATESAGDKRRRRAGFEGKKNDFINKE 1561
D+ ++F L G+ + K SK K L +LA AE KK+RL L+++ + KE A W A++ A GE VKD+P +KK +KRK +K KS+ W R+ + + ++ GD + G +R RAGFEGKK DF+NK+
Sbjct: 264 DLAQVDFGRLAGLNPVGNGNYTEVNKALKNLSKSKNLEKMLADAESKKKRLEELKKSDKQTDKEKAANIEWGHALKEATGERVKDDPAKIKKALKRKAAKKLKSSKAWKTRIESTQSKMDERQKIRNHNLSKRKVGGSAGANLSSKRIEVEKEGDDKKKGG-RRLSRAGFEGKKQDFLNKK 443
BLAST of mRNA_F-serratus_M_contig80.19381.1 vs. uniprot
Match: A0A7S4UJP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UJP3_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 7.810e-6 Identity = 59/190 (31.05%), Postives = 85/190 (44.74%), Query Frame = 2
Query: 1019 PLPTIEDVGDMEFSGLRGVIGRSDSEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANKWDHR---LAGQKKEXXXXXXXXXXXXXXXXXXXXXXXXXATGAGRGDATESAGDKRR-------RRAGFEGKKNDFIN 1555
P +D+ ++F G+ G+ + E + + +K K L LL AE+K+QRL L+Q +E K A + W A++ A GE+V+++P +KK +KRK ++K KSA W R L + E TE KRR RAGFEGKK DFIN
Sbjct: 245 PATVKDDMDGIDFGGISGLATKKHYEDNKSL---SNVNKKKSLERLLEEAEKKQQRLKALKQGDEEDKAKAAKIEWGIALKEASGEKVRNDPAMIKKAMKRKAKKKVKSAEAWKARTDQLRDKIDERQKIRTHNINQRKQGGMAGANLSKKRIVEDEDKKTEDGKKKRRLGPHAEKSRAGFEGKKQDFIN 431
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 361.7 |
| Seed ortholog evalue | 5.4e-97 |
| Seed eggNOG ortholog | 2880.D7FWI2 |
| Preferred name | SURF6 |
| KEGG ko | ko:K10848 |
| KEGG Pathway | ko03420,ko03460,map03420,map03460 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001652,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044452,GO:0044464,GO:0065003,GO:0070013,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1990904 |
| EggNOG free text desc. | ribosomal large subunit biogenesis |
| EggNOG OGs | KOG2885@1,KOG2885@2759 |
| Ec32 ortholog description | Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain |
| Ec32 ortholog | Ec-26_006520.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03032,ko03400 |
| Exons | 8 |
| Model size | 2311 |
| Cds size | 1461 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932390.7920709-UTR-F-serratus_M_contig80:454350..454567 | 1622932390.7920709-UTR-F-serratus_M_contig80:454350..454567 | Fucus serratus male | UTR | F-serratus_M_contig80 454351..454567 + |
| 1690964285.5714169-UTR-F-serratus_M_contig80:454350..454567 | 1690964285.5714169-UTR-F-serratus_M_contig80:454350..454567 | Fucus serratus male | UTR | F-serratus_M_contig80 454351..454567 + |
| 1622932390.9418275-UTR-F-serratus_M_contig80:461100..461393 | 1622932390.9418275-UTR-F-serratus_M_contig80:461100..461393 | Fucus serratus male | UTR | F-serratus_M_contig80 461101..461393 + |
| 1690964285.6751277-UTR-F-serratus_M_contig80:461100..461393 | 1690964285.6751277-UTR-F-serratus_M_contig80:461100..461393 | Fucus serratus male | UTR | F-serratus_M_contig80 461101..461393 + |
| 1622932390.9610217-UTR-F-serratus_M_contig80:461404..461744 | 1622932390.9610217-UTR-F-serratus_M_contig80:461404..461744 | Fucus serratus male | UTR | F-serratus_M_contig80 461405..461744 + |
| 1690964285.6885133-UTR-F-serratus_M_contig80:461404..461744 | 1690964285.6885133-UTR-F-serratus_M_contig80:461404..461744 | Fucus serratus male | UTR | F-serratus_M_contig80 461405..461744 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932390.8099318-CDS-F-serratus_M_contig80:454567..454771 | 1622932390.8099318-CDS-F-serratus_M_contig80:454567..454771 | Fucus serratus male | CDS | F-serratus_M_contig80 454568..454771 + |
| 1690964285.5863318-CDS-F-serratus_M_contig80:454567..454771 | 1690964285.5863318-CDS-F-serratus_M_contig80:454567..454771 | Fucus serratus male | CDS | F-serratus_M_contig80 454568..454771 + |
| 1622932390.8218668-CDS-F-serratus_M_contig80:455854..455962 | 1622932390.8218668-CDS-F-serratus_M_contig80:455854..455962 | Fucus serratus male | CDS | F-serratus_M_contig80 455855..455962 + |
| 1690964285.5976567-CDS-F-serratus_M_contig80:455854..455962 | 1690964285.5976567-CDS-F-serratus_M_contig80:455854..455962 | Fucus serratus male | CDS | F-serratus_M_contig80 455855..455962 + |
| 1622932390.8384237-CDS-F-serratus_M_contig80:456837..457002 | 1622932390.8384237-CDS-F-serratus_M_contig80:456837..457002 | Fucus serratus male | CDS | F-serratus_M_contig80 456838..457002 + |
| 1690964285.6105106-CDS-F-serratus_M_contig80:456837..457002 | 1690964285.6105106-CDS-F-serratus_M_contig80:456837..457002 | Fucus serratus male | CDS | F-serratus_M_contig80 456838..457002 + |
| 1622932390.8600547-CDS-F-serratus_M_contig80:458942..459150 | 1622932390.8600547-CDS-F-serratus_M_contig80:458942..459150 | Fucus serratus male | CDS | F-serratus_M_contig80 458943..459150 + |
| 1690964285.6193094-CDS-F-serratus_M_contig80:458942..459150 | 1690964285.6193094-CDS-F-serratus_M_contig80:458942..459150 | Fucus serratus male | CDS | F-serratus_M_contig80 458943..459150 + |
| 1622932390.8776782-CDS-F-serratus_M_contig80:459456..459608 | 1622932390.8776782-CDS-F-serratus_M_contig80:459456..459608 | Fucus serratus male | CDS | F-serratus_M_contig80 459457..459608 + |
| 1690964285.6280897-CDS-F-serratus_M_contig80:459456..459608 | 1690964285.6280897-CDS-F-serratus_M_contig80:459456..459608 | Fucus serratus male | CDS | F-serratus_M_contig80 459457..459608 + |
| 1622932390.8961236-CDS-F-serratus_M_contig80:459905..460358 | 1622932390.8961236-CDS-F-serratus_M_contig80:459905..460358 | Fucus serratus male | CDS | F-serratus_M_contig80 459906..460358 + |
| 1690964285.6463244-CDS-F-serratus_M_contig80:459905..460358 | 1690964285.6463244-CDS-F-serratus_M_contig80:459905..460358 | Fucus serratus male | CDS | F-serratus_M_contig80 459906..460358 + |
| 1622932390.9157412-CDS-F-serratus_M_contig80:460929..461100 | 1622932390.9157412-CDS-F-serratus_M_contig80:460929..461100 | Fucus serratus male | CDS | F-serratus_M_contig80 460930..461100 + |
| 1690964285.6645315-CDS-F-serratus_M_contig80:460929..461100 | 1690964285.6645315-CDS-F-serratus_M_contig80:460929..461100 | Fucus serratus male | CDS | F-serratus_M_contig80 460930..461100 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19381.1 >prot_F-serratus_M_contig80.19381.1 ID=prot_F-serratus_M_contig80.19381.1|Name=mRNA_F-serratus_M_contig80.19381.1|organism=Fucus serratus male|type=polypeptide|length=487bp
MEEIEDEVVEGVEWGEDELSLEASSDELVATIQGHDRFFSLMLDMIPESL VLPVKQVLEPSYASKYMKNKKDNAPQQSKKEESKKNKRARYAADNQKTVS ERQQERAREEARDGVDGEHGGEDEDGSGAEVEEGGLEPEAIRGKTMDVTS MDALKRKIQDRISAMRQKRVATEGGRRAKTSEKRSAERLVKRESKRKGAK TRKKGKDEGEKKHASTAASSATGSEPRGASRDSSRNSSKQPKAAGTHVSV PRAKPEALRPVAEPQLPPLPTIEDVGDMEFSGLRGVIGRSDSEKRRPPKV GAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAG GEEVKDNPGALKKMIKRKEREKAKSANKWDHRLAGQKKEQSKKQEKREEN LKKRKMGGVAAATTATGAGRGDATESAGDKRRRRAGFEGKKNDFINKEKT RGGVKNGGGGRGGGGRGGGAGKAVGGRGAVRDNAKG* back to topmRNA from alignment at F-serratus_M_contig80:454351..461744+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig80.19381.1 ID=mRNA_F-serratus_M_contig80.19381.1|Name=mRNA_F-serratus_M_contig80.19381.1|organism=Fucus serratus male|type=mRNA|length=7394bp|location=Sequence derived from alignment at F-serratus_M_contig80:454351..461744+ (Fucus serratus male) AACGGAGACAAGCCCGTCTCCCAAATCAAGCAAGCCACCTAACATTGCTC
TTGTACAGGTAGCAACATCCAAATTGGATAGATCCAAGGACTCCGGCCAA
GAGCTGAAGAATGCGACGCATCACTCCAAGCATGGGGATGAGAATGGTGC
AAGGAGTGCCACTCAATCGAGAGGACAGGTTGCAAAGGATCGGACAAAGA
AACGGGCCAGAAGTCACATGGAAGAGATCGAGGACGAAGTGGTGGAGGGC
GTGGAGTGGGGCGAGGACGAACTATCCCTTGAGGCATCATCGGACGAGCT
AGTGGCCACGATTCAAGGGCATGACCGCTTTTTTTCGCTGATGCTAGACA
TGATTCCTGAAAGCCTTGTGTTGCCGGTGAAACAGGTGTTGGAGCCTTCC
TACGCCAGCAAGTACATGAAGGTAACAGACGGCGCACTCAACGCTTTCGG
TGTCTTTCAAGGCTTATCGTAGTGCTTATGTAGTCAAGTACCAGTACATT
AGTAACAAATACTGCTGTCTGTTACCAGGTATGATATATAGTACCTGGCA
CCAGGACGAGTGTGTACGAGTATTAAATACCTCTACATCGTTCTGTGGAG
AGGAGAAACCGCAAAAACGTGAATCAGCGATTTTACTGTATAGATAAAAA
CTGTTCGCATGAGCACTCGTAGTAAAGCGGGAGGAATCCTGTGAGTAAGC
ACCACATTCAGCCTGGGGGTGAATGAAGAGCAGGCTGACGCGGGACTGGA
CCCCCCGAACCCGTCTCATGACATCAAATCCCGCGCATCGGGCGCGAACG
AGGACAGCAAAAAGTTAATTTTCCTTATTCAGCTGTCCACTATGCTGAAA
TTGCTTACAATACATACGGCCTGTCTGGACAAGCGAAGCTCCCCGACGAC
GTACCCAATGCTGTCTACAATATGTATGTATGGTCATTATGTAGCAGAGT
ATGGATCAACCGGGTAAGGTTGTCAATGTTGATCATGGTCATCTGAACAG
GGAAGAATGAATGTTTCCCTGTCCCCGTTCGCGCCTGAGAATCTGGTCTC
GCGAGACGGGTTCGGCCGTCCCGTCCCGCGTCAGCCTGCTCCCTCTCCAC
ACAGCCTAAAAGGGAGGATAGACTCCCATTGCTGGCGATTCTTAACGGTG
CCCGTACAAACTCGTCTGTAATAGCTGAAGAGTACGAAACAGTTGACGAG
TTTTGTCGTTGCGTTTCCCCCCGGTCATGTAGGACTGGAAACCCCGCGGA
TCCCACACCTAAAAAACAGTAGAGCCGATACCATGAGCGGCGCTATACCT
CACGATCTCGCCTCCTTGCATAACGATAATATATATGAATAAGGTACTTC
GGACAATCTGTACACTGCCGTTTTCATCACGACATCGCGCGGACCGCTCG
GTTGGTCGGGTGATAGCTATTCGTCGACGCCGGCAGTATCATCTGCGCTC
CCCTGCTCCCACGTACCCATCCCATCCCATATCCGTCCCATATCCATCCC
ACAGAACAAAAAGGACAATGCGCCTCAGCAGTCGAAGAAGGAGGAGTCGA
AGAAAAATAAGCGTGCGCGATACGCCGCGGACAACCAGAAGACTGTCTCA
GAAAGGCAGCAGGTACGTTTTTCCTGTTCGGTTGACCAACAAGCAGGATT
GGTGGTTTGGTTTGGTTTGGTGAAATCTCCTCGAAGAGGGAAGGTGGTGA
CTAACACACATGATATAACAGATACCCACGTTGGGAGGAGGACCATAATG
TTAATATCAACAGCTTAGACTGAAGAGCGCGACAGCGCCGGGTTACGCGA
CCATGTCTCGTTTTATAAATGTACTGTTTATAGTATATTTTCGTTGATAA
CCAAAAATAAGGACCGTAAGTATCGGAGTCTTGGCACGCCCTCCAGACTG
ATTTTCTAGGTTCGATTGCTCCACAACCAAGAGAATGTGAACACCGACCG
ATACGTCTAAAGAAAGCTCTCGACGAGATCTTTCGAAAACCGCCCTTTTC
GGCAATGGCACCTTATAACCCTCTTGGTTGTGGAGCAATCGAGCCTGGAA
GCCAGTCTAGGGGGTGGGCCGAGACTCCGATACTTACGGTAAACCTAGTT
ACAGACATAGACTAGTTACTTCGTGACAATATCAACAGTTCGCTCTGCGG
TACAGATGTCAGCGCCTTCTGCTCTTATTTCTTGAAACCGCTGTTCCGCC
GAGCGATAACAGGCTGGAGGATAAAATATAACAACTCCTCACTTTTTCAA
GCACGATAATTAAGAAATATACAAAACCCAGGCGCTGAAAGTTGCCATGA
ACTACGCTATGATAATTGTCGAGGTTGTCCTGTGTTTCTTACCATGGCAT
AATGGCCAAAGCCCACAAAAAAGAAGCGCTCGAGAACACTCACTTTCTCC
CTGCTTTTTTGTTTTTTGTTTTGCTTTCCCCCATCGTTTCAAAATTGATG
TAAATGTAAATGTTCATTTGTTTTCTGTCTGGCGAAGGAGCGCGCTAGAG
AAGAGGCGCGAGACGGCGTCGATGGCGAGCACGGTGGCGAAGACGAGGAC
GGAAGTGGCGCTGAGGTAGAAGAAGGCGGACTCGAGCCAGAGGCGATCCG
GGGCAAGACGATGGACGTGACATCCATGGATGCTCTCAAGAGAAAGATTC
AGGTACAAACGAGGAGGACAAAGCTCCATTCCTGTGCCAAAATTTGGGTG
TAGCCCTATTCGTGTCGACAGCGGGAGTATTATAGTAGACTCGTCGCTCG
GGTGTGTCAACAGACGGGATGCAGCCTCGCTCTAGAGAAAGAGAGGGCCC
CCGGGGATCGACACTGCTGCTTGCACTCTCGCGCAAACGATCGGTGGCGT
GCTTGGTGAAGAGAGCACAAATGGTCATTATTAATAGTGTCGTGCACGGG
TATGAGATGACCCTGGGGGCTTCGCCGCTGCCTCGGTCTTGACATTGACA
TGCTTACGACGATGACGATGGGGCATTTGAAGACCGACTGTATCTCGACG
TCCTTGTTTGATGGTGCCAGCTGTAATGTCACAACTTTGATGCTGTGGTA
TAGATGCGTGGATCTGATGCGGTAATCGCTCACGAAGCCTTTTTCGGACT
GATATTGGTGGGAAAGAAGAGATATCTAGACGCCGACAACCGAAGGAAGG
AGTCTTGATATATTTCCACTTCCCCTCCCGGTCAGGATATTTAGCAAGAG
TAAGGATCAACCGGGTATGGTTGCCAATCCTGCTGTACTTGTGGTCAGCT
GAACAGGGGAAATAAATATTTCCCTGTCCCCGTTCTTGCTGAGAATTTGG
TCTCGCGAGACGAGTTCGGCGGTCCCGTCCCGCATCAGCCTGCTCATCTC
CATACTCAGGCTGAATATGATGCTTACTGACGGTGCTCCTCCTGATTGCT
TGATATACGGTATATATATATATATGTATATGTATGCTTTCTCTTTGTAT
GGAGAGTACGTCGTACGTTCTTTCCTTCCGAATGGTGTTTTCTACCTTGT
GACCACGGGCTGGGTTTTTTTTACATCAGCTTATGTATGGTCACACATAT
AGCAAGAGTATGGATCAACCTGGTAAGGTTGCCAATCCTGCTTGTGGTCA
GCTGAACAAGGAAAAAGAATATTCCCCTGTCCGCGTTCGCGCCTGAGAAT
TTGGTCTCGCGAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCA
TCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAG
TTCCGCGGCGGCGTCCATATGTATATATTAAACCGCCATACGCCATCGGG
TGAGTCCCAAGTTTATCGGGTCACGCAATATTGCGTACCGATGGCGTTCA
CTGCCGAGAGTCCGTCGGCACAGGGCCAGTAAATCTCAAGGTAGTTCCGA
ACGACTGCTGCCTTAGCAAGTCTCTATGGACCAATTAATATACGCCTCTC
TTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTAACGGCG
ATGTTATGTGGGAATTCAATCAATCAATCATGTAAATATATATATATATA
ATGTAATATATATATACATATATATCCCTGGTATAATATATAGCCGGTAG
TCAGCCTCGCCGGTCTCGCCCTCGACGCTGCGCGTTATCGCACCAGCGGC
GGCCGTTTCGCACACGCCTGGCCAGAACGTATCCCGTATTTGCGTTGCAT
GTTTGACTAAGCGCGAAACAATGGTAATATCATAAATGGACCAATCAACG
CCGTCGCCGAAAGCGGGAGGAATCCCGTGAGTAAGCACCAGATTATGATT
CAGCCTGAATGTGGAGGGAGGGAGCAGGATGTCGCGGAACGGGACGACCG
AACCAGTCTCGCGAGATACCAAACTCTCGGGCGCAAACGGAGTCAGGGAT
CATTTATTTTTCCTGTTGAGCTGACCACGAGCAGGATTGGCAAACCTAAT
CGGGTTGATCCATTTTCTGCGATATGTGATGATCATCCATACATGAAGAG
ATATAATATACTGGGAGGAAGATATCTTTCGCACTTCATGACCTCGCCTG
AGCCCACCGATACTGACGCGACGGTTTGTCGGGGGGATCCAGGATCGCAT
CAGCGCCATGCGGCAGAAGCGGGTGGCCACCGAGGGAGGCCGCCGAGCGA
AGACCTCGGAGAAGAGGAGTGCTGAGCGGCTGGTGAAGCGAGAAAGCAAA
CGGAAGGGTGCTAAGACGAGGAAGAAGGGCAAGGACGAGGGCGAAAAGAA
ACATGCCTCGACCGCCGCCTCTAGTGCTACGGGGTCTGAGCCTAGAGGAG
GTGAGGACGCAGGACTCGTTTTACGAGATTGCAAGAGAGGACCATTTTGT
AAGCCTTGTAATCATGGCGTCTTTGGGGTGGACTCTGGCGTCTGAAGTAC
CGTACGTGGAGTAAAGGACTGCCTTCCCCATTTGACGGCGTATCCTCCGA
TCGCCTCGATTGCACGTATTGTCGCCAGCGCTTTGAACTGTACTTGACCT
GTCAGGAGTGTGACCTAAAGGTTTCCTATGCCCCCCGTCGTGCATGTTTC
GTTTCGCGGTTATTCTTCTGTGTGTTAACTTCGTTTTCTGTGACGGGCGC
CCTTAGCCTCGAGGGATTCAAGCAGAAATTCTTCCAAGCAGCCGAAGGCA
GCCGGAACGCACGTCAGCGTACCCCGTGCGAAGCCGGAAGCGTTGCGCCC
CGTCGCGGAGCCGCAGCTCCCCCCTCTGCCTACAATTGAGGACGTGGGAG
ACATGGAGGTCAGTGTTTTCCCCCCGAAGGGAAGCCCTTTGCGCCCACCC
CTTCGAAATGGTCCAAGCTCTTATATTCGACGTGGCATTCTGTCGTGTGA
GCACTGGATGGGATAGCCTTGCGTAGGTTCCACTACTTCCGTAGCACAAC
TTCAGTGTCGATCCGGTCCCTCCCGTCTTTCCCTGCCATTGTACTATGTA
TGCATCTCTTGACCCGGCCATCCCATCCACTTTCGCCCGCACTGACCCAT
GCGAACTCCCATGGTCACTTATAATGTGCCTCATCGGGACCGAAACGGGT
TGCAGTTTTCCGGGCTACGGGGGGTTATCGGCCGGAGCGACAGCGAGAAG
CGGCGCCCGCCCAAGGTCGGCGCACCCGGCAGCAAGATGAAGCGACTGCA
CGGGCTGCTGGCAGCGGCTGAGGAAAAAAAGCAGCGCCTGGCGGGTCTCC
GGCAGACCAAGGAGGGCAAGGAGGTCGCCAGGCAGGAGGGGTGGGAGGAC
GCGATCCGAATCGCGGGGGGAGAGGAGGTGAAGGACAACCCGGGCGCGCT
GAAAAAGATGATCAAGCGGAAGGAAAGGGAGAAGGCTAAGAGCGCTAACA
AGTGGGACCATAGGCTTGCGGGGCAAAAGAAGGAGCAGAGCAAGAAGCAG
GAGAAGAGAGAGGAGAACCTCAAGAAGCGCAAGATGGGAGGGGTGGCAGC
AGCTACGACAGCTACGGGGGCGGGACGCGGGGATGCGACAGAAAGCGCGG
GCGACAAGGTGAGTTTTCCCGTCTGCGAGTTATATTTTAGGTGGTCTCAT
CTTGTGTACTTGAACGACGCCATCGGGTCTTAGGCTACGCTCGAGAAAAC
TCTGTTACCTGTTCGCGCTGGAATGGTGTAGGGGGGGAAATCTTCATACA
GACGTGCGTACGCCTCCCTTTAGAAAGTTTCCTTGTTTTCACGAGCAATG
CGGAAGAAGCAGTAGATGCTTCCCCTCGCGGAGAAGCAACATATATCTCA
ACCAGCTAGTACTGTACTGCTGTGTCGGGGGAATCTTGGTGGAAGGTTAT
ACCCCCGCCCGCCCCCCGGGACGGCTGCCCTCTCCCAATAAAACCCCAGT
ATTTCTCCATCGAAGTCGAAGGAGGAAGGAATTCTCGATTTGCCTGTTTT
ACTCTGAGAAAAAGCACGTCGCGTAGGGACCTACAGACGGGGGGGGGCAT
GGATCACGCTCTCACAGTTATATTTTATTCAGATATTTTGCCCCTTGGCC
TTTACCGCCGGCCTGCTGCACCCCAACCGTAACCGTACGTACAACCCCCT
CGTCGGGTCGGATGATGTTTGGGTCGCAGCGTCGTCGAAGAGCAGGTTTC
GAGGGAAAGAAGAACGACTTCATCAACAAAGAGAAAACCCGGGGAGGCGT
GAAGAACGGCGGCGGCGGCCGCGGTGGTGGTGGCCGTGGTGGCGGCGCGG
GGAAGGCCGTGGGAGGACGAGGAGCCGTTAGGGACAATGCGAAAGGGTAG
ATCCGAAAGCCGGTAAAACGCTATACGCCACGATTGGAAATGCGGTTTTC
TCCAGATTTGAGAGGGGGGGTGGTGAACCATCCAGTCTGTTGGTCGTCTT
CGTTGCCGAGTGTTAGATTCAGGCGCTGACACGCGTTTTGTTGCTACCCC
CGTGGGGTGCCGAGTGCAGAGATGAGGGTTTCGAGTTGATGCACGGAGCT
CATTTGTGGGGCGATGTAGAGTGCGAACAGCAATTTTCTATTTTGTTCGA
GCACCAAGGCAGTGAGCTGATGGGGGGGATCCTCAAGAAAGGATGCCCGT
GATGTGCCCGTGATGTAACATTCTCGGACGAACGTCGTAAATTTCCGCTC
AAAAGATGGTTCGATACGCCGGGGCAAAAGTTGACACAAGTGCGAGTCGC
CGTGCGAACGTGGGTCGGTATTGGGTATCCGTTCCCGGGGAATGCGCCAT
CAGCTCTCGTGACAGACTCGGCAGACTTGGTTTGGAGGAGAAGCGTTGGC
ACATCGAGAAGAATGAGAAACCGACCAGCGCCCAACCGTTACAGTTACGC
GCTCGTACGACGCGAGCCCATACCGCGATCTCCATTTTCATTCACAAGAA
TATAATATGTTGGCGGCTCATCACGAGTCTTCACATGCTAAGGC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig80:454351..461744+ >mRNA_F-serratus_M_contig80.19381.1 ID=mRNA_F-serratus_M_contig80.19381.1|Name=mRNA_F-serratus_M_contig80.19381.1|organism=Fucus serratus male|type=CDS|length=2922bp|location=Sequence derived from alignment at F-serratus_M_contig80:454351..461744+ (Fucus serratus male) ATGGAAGAGATCGAGGACGAAGTGGTGGAGGGCGTGGAGTGGGGCGAGGA CGAACTATCCCTTGAGGCATCATCGGACGAGCTAGTGGCCACGATTCAAG GGCATGACCGCTTTTTTTCGCTGATGCTAGACATGATTCCTGAAAGCCTT GTGTTGCCGGTGAAACAGGTGTTGGAGCCTTCCTACGCCAGCAAGTACAT GAAGATGGAAGAGATCGAGGACGAAGTGGTGGAGGGCGTGGAGTGGGGCG AGGACGAACTATCCCTTGAGGCATCATCGGACGAGCTAGTGGCCACGATT CAAGGGCATGACCGCTTTTTTTCGCTGATGCTAGACATGATTCCTGAAAG CCTTGTGTTGCCGGTGAAACAGGTGTTGGAGCCTTCCTACGCCAGCAAGT ACATGAAGAACAAAAAGGACAATGCGCCTCAGCAGTCGAAGAAGGAGGAG TCGAAGAAAAATAAGCGTGCGCGATACGCCGCGGACAACCAGAAGACTGT CTCAGAAAGGCAGCAGAACAAAAAGGACAATGCGCCTCAGCAGTCGAAGA AGGAGGAGTCGAAGAAAAATAAGCGTGCGCGATACGCCGCGGACAACCAG AAGACTGTCTCAGAAAGGCAGCAGGAGCGCGCTAGAGAAGAGGCGCGAGA CGGCGTCGATGGCGAGCACGGTGGCGAAGACGAGGACGGAAGTGGCGCTG AGGTAGAAGAAGGCGGACTCGAGCCAGAGGCGATCCGGGGCAAGACGATG GACGTGACATCCATGGATGCTCTCAAGAGAAAGATTCAGGAGCGCGCTAG AGAAGAGGCGCGAGACGGCGTCGATGGCGAGCACGGTGGCGAAGACGAGG ACGGAAGTGGCGCTGAGGTAGAAGAAGGCGGACTCGAGCCAGAGGCGATC CGGGGCAAGACGATGGACGTGACATCCATGGATGCTCTCAAGAGAAAGAT TCAGGATCGCATCAGCGCCATGCGGCAGAAGCGGGTGGCCACCGAGGGAG GCCGCCGAGCGAAGACCTCGGAGAAGAGGAGTGCTGAGCGGCTGGTGAAG CGAGAAAGCAAACGGAAGGGTGCTAAGACGAGGAAGAAGGGCAAGGACGA GGGCGAAAAGAAACATGCCTCGACCGCCGCCTCTAGTGCTACGGGGTCTG AGCCTAGAGGAGGATCGCATCAGCGCCATGCGGCAGAAGCGGGTGGCCAC CGAGGGAGGCCGCCGAGCGAAGACCTCGGAGAAGAGGAGTGCTGAGCGGC TGGTGAAGCGAGAAAGCAAACGGAAGGGTGCTAAGACGAGGAAGAAGGGC AAGGACGAGGGCGAAAAGAAACATGCCTCGACCGCCGCCTCTAGTGCTAC GGGGTCTGAGCCTAGAGGAGCCTCGAGGGATTCAAGCAGAAATTCTTCCA AGCAGCCGAAGGCAGCCGGAACGCACGTCAGCGTACCCCGTGCGAAGCCG GAAGCGTTGCGCCCCGTCGCGGAGCCGCAGCTCCCCCCTCTGCCTACAAT TGAGGACGTGGGAGACATGGAGCCTCGAGGGATTCAAGCAGAAATTCTTC CAAGCAGCCGAAGGCAGCCGGAACGCACGTCAGCGTACCCCGTGCGAAGC CGGAAGCGTTGCGCCCCGTCGCGGAGCCGCAGCTCCCCCCTCTGCCTACA ATTGAGGACGTGGGAGACATGGAGTTTTCCGGGCTACGGGGGGTTATCGG CCGGAGCGACAGCGAGAAGCGGCGCCCGCCCAAGGTCGGCGCACCCGGCA GCAAGATGAAGCGACTGCACGGGCTGCTGGCAGCGGCTGAGGAAAAAAAG CAGCGCCTGGCGGGTCTCCGGCAGACCAAGGAGGGCAAGGAGGTCGCCAG GCAGGAGGGGTGGGAGGACGCGATCCGAATCGCGGGGGGAGAGGAGGTGA AGGACAACCCGGGCGCGCTGAAAAAGATGATCAAGCGGAAGGAAAGGGAG AAGGCTAAGAGCGCTAACAAGTGGGACCATAGGCTTGCGGGGCAAAAGAA GGAGCAGAGCAAGAAGCAGGAGAAGAGAGAGGAGAACCTCAAGAAGCGCA AGATGGGAGGGGTGGCAGCAGCTACGACAGCTACGGGGGCGGGACGCGGG GATGCGACAGAAAGCGCGGGCGACAAGTTTTCCGGGCTACGGGGGGTTAT CGGCCGGAGCGACAGCGAGAAGCGGCGCCCGCCCAAGGTCGGCGCACCCG GCAGCAAGATGAAGCGACTGCACGGGCTGCTGGCAGCGGCTGAGGAAAAA AAGCAGCGCCTGGCGGGTCTCCGGCAGACCAAGGAGGGCAAGGAGGTCGC CAGGCAGGAGGGGTGGGAGGACGCGATCCGAATCGCGGGGGGAGAGGAGG TGAAGGACAACCCGGGCGCGCTGAAAAAGATGATCAAGCGGAAGGAAAGG GAGAAGGCTAAGAGCGCTAACAAGTGGGACCATAGGCTTGCGGGGCAAAA GAAGGAGCAGAGCAAGAAGCAGGAGAAGAGAGAGGAGAACCTCAAGAAGC GCAAGATGGGAGGGGTGGCAGCAGCTACGACAGCTACGGGGGCGGGACGC GGGGATGCGACAGAAAGCGCGGGCGACAAGCGTCGTCGAAGAGCAGGTTT CGAGGGAAAGAAGAACGACTTCATCAACAAAGAGAAAACCCGGGGAGGCG TGAAGAACGGCGGCGGCGGCCGCGGTGGTGGTGGCCGTGGTGGCGGCGCG GGGAAGGCCGTGGGAGGACGAGGAGCCGTTAGGGACAATGCGAAAGGGTA GCGTCGTCGAAGAGCAGGTTTCGAGGGAAAGAAGAACGACTTCATCAACA AAGAGAAAACCCGGGGAGGCGTGAAGAACGGCGGCGGCGGCCGCGGTGGT GGTGGCCGTGGTGGCGGCGCGGGGAAGGCCGTGGGAGGACGAGGAGCCGT TAGGGACAATGCGAAAGGGTAG back to top
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