mRNA_F-serratus_M_contig80.19374.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI) HSP 1 Score: 305 bits (780), Expect = 2.140e-98 Identity = 167/297 (56.23%), Postives = 203/297 (68.35%), Query Frame = 1
Query: 1 WVFLREPSAAYLERFLERQDTENAATNHPYAGFTDPAASRGDAAXXXXXXXGFQERTVRVRLGGGKRTYEAGRKALLLWRMHEGSSWARIKLARRLGGKSSQANIICIRDTRVLARTRFCASISQPNMATVAKALGGLVWCVNPCKVLYERKDAPLRFLAPAAPEEGYALSSGWSKPSDRVKVAKHGGKEQGWLWSGGAPSTAPPWALFSPGRHHTGKQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRRVADPS 891
+ F REPSA+ + R+LERQDTE + NH +AGF+D AA+ XXXXXX GFQERTVR LG GK TY GR+ALL W+MHEGSSWARI L +R + Q N++ T+AKA GLVWC+NPC+VLYER D LRF+AP + +L G ++P + K GG G LW+G P++AP WA F PG H G+Q+AVAYATK GHL+QGEERMRV+ F G GG DDSVWFEVYS+SRGAG +GG++FPFVQSMQRRFFREQAETM+RV + S
Sbjct: 24 FTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVRAHLGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPALQRNLV-----------------------TIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEARPVENTKRVMGGGG--GALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGG-DDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSS 294
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: A0A835Z0Y9_9STRA (DUF1990 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 9.720e-18 Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 1
Query: 382 MATVAKALGGLVWCVNPCKVLYERKDAPLRFLAPAAPEEGYALSSGWSKPSDRVKVAKHGGKEQGWLWSGGAPSTAPPWALFSPGRHHTGKQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRRV 879
+ T++ ALGG++WC+NPC Y D P + + SSG + +V K Q G P G Q A+AY T +GH +GEER+RVVW G VWFEV+S+SRG G G +FP ++ QRRFF +Q + M R+
Sbjct: 49 LCTISAALGGIMWCMNPCLTQYAVTDTPYTCVVNRGSKA--TDSSGANSNLQCQQVRKRFPDAQR-----GRPR---------------GMQTAIAYCTVRGHWFEGEERVRVVWEHDSHG---HVWFEVWSLSRGHGWWGAAIFPLMRRTQRRFFEDQVDAMVRL 189
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: R1E3Q5_EMIHU (DUF1990 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E3Q5_EMIHU) HSP 1 Score: 77.8 bits (190), Expect = 1.060e-12 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 652 KQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRRVA 882
++ +V Y+T GHL++GEE+M VVW R D V FEV S SRGAG LG ++FP + S QRRFFREQ M+R A
Sbjct: 136 RRCSVGYSTLSGHLLEGEEKMDVVWSRET----DEVAFEVVSHSRGAGPLGKLLFPALSSTQRRFFREQCRCMQRAA 208
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: A0A5J4Y186_9CHLO (DUF1990 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y186_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 2.530e-7 Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 646 TGKQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRRVADPSRD 897
TG+Q A++T GH + GEER V W + DDSVW+++Y++SR A L + +P ++ +Q++F ++ + + A S D
Sbjct: 81 TGQQLKYAHSTLHGHALAGEERFAVEWHKE----DDSVWYDIYTVSRPATPLAAISYPVIRLLQKQFQKDSFKVVTAAAAASAD 160
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 6.080e-7 Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 1 WVFLREPSAAYLERFLERQDTENAATNHPYAGFTDPAASRGDAAXXXXXXXGFQERT 171
+ F REPSA+++ R+LERQDT + NH +AGF+D AA+ XXXXXX GFQERT
Sbjct: 24 FTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: A0A2P6VI37_9CHLO (DUF1990 domain-containing protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VI37_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 1.640e-6 Identity = 82/304 (26.97%), Postives = 118/304 (38.82%), Query Frame = 1
Query: 4 VFLREPSAAYLERFLERQDTENAATNHPYAGFTDPAASRGDAAXXXXXXXGFQERTV---RVRLGGGKRTYEAGRKALLLWRMHEGSSWARIKLARRLGGKSSQANIICIRDTRVLARTRFCASISQPNMATVAKALGGLVWCVNPCKVLYERKDAPLRF-----LAPAAPEEGYA-----LSSGWSKPSDRVKVAKHGGKEQGWLWSGGAPSTAPPWALFSPGRHHTGKQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRR 876
+FL PSA ER D E A P++ F ++ AA + TV RV+LG G+ Y ++ L W H WA + A G A ++ V A+T F W NP ++ Y ++ LR AP P S G ++ S +A+ GG W + S A A P G++ A A+ T GH +QGEER V W DDSVW+E+Y++SR L P ++ Q +F + M+R
Sbjct: 9 LFLGPPSAE------ERTDLEAKAVKLPFS-FQHVGITQ--AAPPLPADVEAEAWTVDHNRVKLGQGRAAYRKAQRLLQRWH-HFDLGWASVNKAEMREG----APVV------VTAKTLFA-------------------WSCNPLRISYV-EERGLRGGQRPPWAPPPPPRAKGSTQLHTSCGGARESPSQGLARGGGGRAEWAAAQERSSGA---AAHLP----RGRRYAFAHTTLAGHQIQGEERFAVAWNHE----DDSVWYEIYTLSRPGNWLTTATHPLLRLFQHKFAADSMAAMQR 261
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: I0YZW6_COCSC (DUF1990 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW6_COCSC) HSP 1 Score: 57.4 bits (137), Expect = 7.450e-6 Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 1
Query: 598 PSTAPPWALFSPGRHHTGKQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRRVAD 885
P+ A A P G + + T +GH + GEER V W + DDSVW+E+Y+ISR A L +P + Q+RF RE ++R A+
Sbjct: 125 PAAAMLRARRQPACTSRGLRFDLGQTTLEGHSLAGEERFSVQWSKE----DDSVWYEIYAISRPATLLALASYPLTRYYQQRFRRESMAAVQRAAE 216
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: E1Z534_CHLVA (DUF1990 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z534_CHLVA) HSP 1 Score: 57.4 bits (137), Expect = 1.400e-5 Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 649 GKQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRR 876
G++ A A+ T +GH ++GEER V W DDSVW+E+Y++SR + P +++ QR+F + + M+R
Sbjct: 203 GRRFAFAHTTLQGHQIRGEERFCVAW----NAQDDSVWYEIYTLSRPGSWITAAAHPLLRAFQRKFAADSCDAMQR 274
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: A0A8J9WMC4_9CHLO (Probable UPF0548 protein At2g17695 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WMC4_9CHLO) HSP 1 Score: 55.1 bits (131), Expect = 4.660e-5 Identity = 34/98 (34.69%), Postives = 47/98 (47.96%), Query Frame = 1
Query: 598 PSTAPPWALFSPGRHHTGKQAAVAYATKKGHLMQGEERMRVVWFRGRGGGDDSVWFEVYSISRGAGCLGGMMFPFVQSMQRRFFREQAETMRRVADPS 891
P+TA A P G + T +GH + GEER V W + DDSVW+E+Y++SR A L +P + QRRF +E + D S
Sbjct: 128 PATALLKASRQPACTRKGMRYDFRQTTLEGHSLAGEERFSVQWCKE----DDSVWYEIYAVSRPATILALASYPLTRYYQRRFRQESIAAVCDAVDTS 221
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Match: A0A7S4N191_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N191_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 7.080e-5 Identity = 78/296 (26.35%), Postives = 105/296 (35.47%), Query Frame = 1
Query: 175 RVRLGGGKRTYEAGRKALLLWRMHEGSSWAR-----------------IKLARRLGGKSSQANIICIRDTRVLARTRFCASISQP-NMATVAKALGGLVWCVNPCKVLYERKDAPLRFLAPAAPEEGYALSSGWSKPSDRVKVAKHGGKEQGWLWSGGAPS-------------TAPPWALFSPGRHHTGKQAAVAYATKKGHLMQGEERMRVVWFRG----------------------------RGGGDDSVWFEVYSISRGA-GCLGGMMFPFVQSMQRRFFREQAETMRRVA 882
R R+G G+R Y A R A L W H SS R +K+ R S A+ R+ L R R AS S A+ A+ V N C + E P G S+P+ ++ + G GG S A + L G + AYAT +GHL+ GEER+ V + G GGG+ V E+ S SR A +G + +P V MQ RFFR Q + + RVA
Sbjct: 194 RRRVGAGERCYSAVRDAALEWEFHSSSSGERXXXXXXXXXXXXGSMGILKIPRGRSLSSPAAS----REGLFLWRPRPAASSSSSMRTASAGCAIYDNVPAWNDCGGISEPLTGPAAASVLQIWPGGSVGEGASSRPATGRRLVTYSETALGGKARGGRSSLNLRLPSLYASNPVAVVYDLVDQNGPDGGLYTSTAYATLRGHLLSGEERVTVAFRNGGSVGGRSSLSDAGGSAAVAPLLRADGFGTGGGEGYVDVEILSYSRAAPSIMGKLAWPLVGRMQDRFFRRQLDALERVA 485 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19374.1 >prot_F-serratus_M_contig80.19374.1 ID=prot_F-serratus_M_contig80.19374.1|Name=mRNA_F-serratus_M_contig80.19374.1|organism=Fucus serratus male|type=polypeptide|length=223bp MHEGSSWARIKLARRLGGKSSQANIICIRDTRVLARTRFCASISQPNMATback to top mRNA from alignment at F-serratus_M_contig80:349226..352547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19374.1 ID=mRNA_F-serratus_M_contig80.19374.1|Name=mRNA_F-serratus_M_contig80.19374.1|organism=Fucus serratus male|type=mRNA|length=3322bp|location=Sequence derived from alignment at F-serratus_M_contig80:349226..352547+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:349226..352547+ >mRNA_F-serratus_M_contig80.19374.1 ID=mRNA_F-serratus_M_contig80.19374.1|Name=mRNA_F-serratus_M_contig80.19374.1|organism=Fucus serratus male|type=CDS|length=1338bp|location=Sequence derived from alignment at F-serratus_M_contig80:349226..352547+ (Fucus serratus male)back to top |