mRNA_F-serratus_M_contig80.19361.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: D8LQ53_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ53_ECTSI) HSP 1 Score: 226 bits (577), Expect = 5.140e-71 Identity = 106/135 (78.52%), Postives = 122/135 (90.37%), Query Frame = 2
Query: 5 EGQVLKVLASTKSSTCESC-KGARQGDLLEIEYTGRLQDGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGVNMCV 406
E QV+K+L S KS+ C SC +GAR+GDLLEIEYT +L+DGKVFDGSSIKVNGREVVGR GD +LFFVLGKQP+GQFPPGWDL+L GMC GE+R+ISVPPLLGYG QG+P+RGVP N+TLLYDVKL+GVNGVNMCV
Sbjct: 219 EEQVVKLLNSDKSAECNSCGQGARRGDLLEIEYTAKLEDGKVFDGSSIKVNGREVVGRAGDTTLFFVLGKQPKGQFPPGWDLLLIGMCVGETRLISVPPLLGYGAQGMPKRGVPANATLLYDVKLIGVNGVNMCV 353
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A7S2WCX0_9STRA (Peptidylprolyl isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCX0_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.740e-45 Identity = 69/110 (62.73%), Postives = 91/110 (82.73%), Query Frame = 2
Query: 62 KGARQGDLLEIEYTGRLQDGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNG 391
+GA +GDLLEI Y RL+DGK+ DG+SI ++G+ + GRGGD S+FFVLG+QPRGQFPPGWD+ L GMC GE+R I+VPP+L YG++G+PRRG+PPNS ++Y V L+ NG
Sbjct: 188 EGAARGDLLEITYEARLKDGKLVDGASISIDGQSLAGRGGDSSIFFVLGQQPRGQFPPGWDVSLIGMCVGEAREITVPPVLAYGSKGIPRRGIPPNSEIVYKVVLLSRNG 297
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A7S0BXT3_9STRA (Peptidylprolyl isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXT3_9STRA) HSP 1 Score: 149 bits (375), Expect = 5.050e-43 Identity = 68/126 (53.97%), Postives = 91/126 (72.22%), Query Frame = 2
Query: 20 KVLASTKSSTCESCKGARQGDLLEIEYTGRL-QDGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGV 394
K+ S + +GA GDL+EI Y G + + G VFDGS+IK+NG V GRGGDI++FFVL KQP QFPPGW++ + MC GE R I VPP+L YG++G+PRRG+PP++TL YDV L+ +NG+
Sbjct: 26 KITVSQLKAPILCTQGAETGDLIEISYVGTVVETGAVFDGSTIKINGEAVPGRGGDITIFFVLNKQPFNQFPPGWNVGMESMCIGERRRILVPPVLAYGSKGVPRRGIPPDATLQYDVTLISINGL 151
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A7S2JVG9_9STRA (Peptidylprolyl isomerase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVG9_9STRA) HSP 1 Score: 149 bits (376), Expect = 7.820e-43 Identity = 68/132 (51.52%), Postives = 93/132 (70.45%), Query Frame = 2
Query: 2 EEGQVLKVLASTKSSTCESCKGARQGDLLEIEYTGRL-QDGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGV 394
+E Q V + C +GAR DLLEI Y G + + G +FDGS+I ++G+ + GRG D+SLFFVLGKQP GQFPPGWD+ L GMC GE R + +PP+L YG+ G+PRR +PP++TL YD+ L+ +NG+
Sbjct: 48 QEDQRFSVTQLKAPTMCN--RGARTDDLLEISYVGSVVETGTIFDGSAITIDGKGIPGRGNDVSLFFVLGKQPFGQFPPGWDVGLEGMCVGERRRVVIPPVLAYGSVGVPRRNIPPDATLQYDITLISINGL 177
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A835ZH12_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH12_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.210e-42 Identity = 75/134 (55.97%), Postives = 91/134 (67.91%), Query Frame = 2
Query: 5 EGQVLKVLASTKSSTCESCKGARQGDLLEIEYTGRLQ-DGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGVNMC 403
+ Q L V ++ C +C GA +GDLLEI YT RL G VFD S GR GRGGD + +FVLG+QPRGQFPPGWDL L GMC GE R ++VPP LGYG +G PRRGVP + L+Y+V+LV VN V +C
Sbjct: 209 DDQSLAVRTMRRADACRACAGAARGDLLEIRYTARLAATGAVFDAS-----GRGAPGRGGDATFYFVLGEQPRGQFPPGWDLGLLGMCVGEVREVAVPPALGYGARGAPRRGVPGGAALVYEVELVSVNSVALC 337
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A8J9RYM0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9RYM0_PHATR) HSP 1 Score: 145 bits (366), Expect = 6.750e-42 Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 2
Query: 59 CK-GARQGDLLEIEYTGRL-QDGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNG 391
CK GA DLLEI Y G + + G+VFDGS+IK++G + GRG D+SL+FVLGKQP GQFPPGWD+ + G C GE R + +PP L YG++G+PRRG+PP++TL YD+ LV +NG
Sbjct: 20 CKRGATTDDLLEISYRGSVVETGQVFDGSAIKIDGGGIPGRGDDVSLYFVLGKQPFGQFPPGWDVGMVGQCVGERRRLIIPPALAYGSKGVPRRGIPPDATLQYDITLVSLNG 132
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A6V1NQ85_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NQ85_HETAK) HSP 1 Score: 151 bits (382), Expect = 9.020e-42 Identity = 70/118 (59.32%), Postives = 87/118 (73.73%), Query Frame = 2
Query: 65 GARQGDLLEIEYTGRLQDG------KVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGVNM 400
GA GDLLEI Y G L DG +VFDGS++KVNGREV GRGGD ++FFVLGKQP GQFPP WD+ + GMC GE R +++PP LG+G L RRG+P STL+YDV + G+NG ++
Sbjct: 234 GAEYGDLLEIGYVGYLADGPDGGPGRVFDGSAVKVNGREVSGRGGDTTVFFVLGKQPTGQFPPAWDVGMLGMCVGEKRRLTIPPALGFGEASLKRRGIPAGSTLIYDVMVNGINGQSL 351
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A448Z0S4_9STRA (Peptidylprolyl isomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0S4_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.290e-41 Identity = 66/112 (58.93%), Postives = 89/112 (79.46%), Query Frame = 2
Query: 62 KGARQGDLLEIEYTGRLQD-GKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGV 394
+GA + DLLEI Y G++ + G +FDGS++++NG + GRG D+S+FFVLGKQP GQFPPGWD L G+C GE R + VPP+L YG++GLPRRG+PP++TL YDV LV +NG+
Sbjct: 305 RGATEDDLLEISYVGKVAETGAIFDGSAVRINGEGIAGRGNDVSIFFVLGKQPFGQFPPGWDAGLEGICVGERRRLLVPPVLAYGSKGLPRRGIPPDATLQYDVTLVSLNGL 416
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A1Z5JK25_FISSO (Peptidylprolyl isomerase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK25_FISSO) HSP 1 Score: 150 bits (379), Expect = 2.360e-41 Identity = 67/113 (59.29%), Postives = 88/113 (77.88%), Query Frame = 2
Query: 62 KGARQGDLLEIEYTGRL-QDGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGVN 397
+GA+ DLLEI Y G + + G +FDGS++K+NG+ + GRG D+SLFFVLGKQP GQFPPGWD+ L G C GE R + +PP L YG+ GLPRRG+PP++TL YDV LV +NG++
Sbjct: 235 RGAQVDDLLEISYIGTVVETGAIFDGSAVKINGQGIPGRGDDVSLFFVLGKQPFGQFPPGWDVGLVGCCVGERRRLLIPPALAYGSTGLPRRGIPPDATLQYDVTLVSLNGLS 347
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Match: A0A1E7FEA6_9STRA (Peptidylprolyl isomerase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEA6_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.650e-41 Identity = 69/116 (59.48%), Postives = 86/116 (74.14%), Query Frame = 2
Query: 59 CK-GARQGDLLEIEYTGRL-QDGKVFDGSSIKVNGREVVGRGGDISLFFVLGKQPRGQFPPGWDLMLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGVNM 400
CK G+ DL+EI Y GR+ + G +FDGS+I V+G + GRG D+S+ FVLGKQP GQFPPGWD+ LT MC GE R I VPP+L YG +GLPRRG+P +TL YDV LV +NG+ M
Sbjct: 19 CKRGSTLDDLMEISYIGRVVETGNIFDGSAIMVDGEGIPGRGNDVSISFVLGKQPFGQFPPGWDVGLTDMCVGERRRILVPPVLAYGEKGLPRRGIPSQATLQYDVTLVSLNGLAM 134 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig80.19361.1 >prot_F-serratus_M_contig80.19361.1 ID=prot_F-serratus_M_contig80.19361.1|Name=mRNA_F-serratus_M_contig80.19361.1|organism=Fucus serratus male|type=polypeptide|length=55bp MLTGMCAGESRMISVPPLLGYGTQGLPRRGVPPNSTLLYDVKLVGVNGVNback to top mRNA from alignment at F-serratus_M_contig80:62847..63924- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig80.19361.1 ID=mRNA_F-serratus_M_contig80.19361.1|Name=mRNA_F-serratus_M_contig80.19361.1|organism=Fucus serratus male|type=mRNA|length=1078bp|location=Sequence derived from alignment at F-serratus_M_contig80:62847..63924- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig80:62847..63924- >mRNA_F-serratus_M_contig80.19361.1 ID=mRNA_F-serratus_M_contig80.19361.1|Name=mRNA_F-serratus_M_contig80.19361.1|organism=Fucus serratus male|type=CDS|length=330bp|location=Sequence derived from alignment at F-serratus_M_contig80:62847..63924- (Fucus serratus male)back to top |