mRNA_F-serratus_M_contig8.19352.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8.19352.1
Unique NamemRNA_F-serratus_M_contig8.19352.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: D8LS56_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS56_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 3.300e-113
Identity = 229/373 (61.39%), Postives = 252/373 (67.56%), Query Frame = 1
Query:  193 ASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAASSPTVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHTSWSSIFNWGARSGTAGXXXXXXXXXXXXXX------------------------ATTSPLESMSVKDLRVIMSKLGVTTQGCIEKRDMVERIRACGRYREGLGGGR 1239
            ASR ALKNIP+V IAA DLAEETNRSCSVCL+DHELG   VKLPCAHIFHRECVWEWLELHCTCPVCRFELETED  YERERRVRM+GRRPRYRR+EL+GLSIPQ+RNLAR QNV+IAGCLEK DIVR +++SG +E+V SE P YDA+ELS+M +RQLRSLMLQAGI  EGCLE++DLLDRI SSRLVTVTH +   PP    A  S A         XX         XXXXXXXXXXX                       G   W              XXXXXXXXXXXXXX                        A   PLESMSVK+LR I S+LGV+T GC+EKRDMVERIR+CGRYRE  G GR
Sbjct:   28 ASRTALKNIPEVKIAALDLAEETNRSCSVCLEDHELGETVVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDAGYERERRVRMRGRRPRYRRQELEGLSIPQVRNLARGQNVNIAGCLEKADIVRCLLDSGTIEVVNSEIPSYDAEELSNMGLRQLRSLMLQAGIGTEGCLEKADLLDRIASSRLVTVTHGEAVPPP----APPSFAXXXXXXXXXXXRQAPERGATXXXXXXXXXXXARGQGGVEERRWAEPNSNSFSRAGIRPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRPLESMSVKELREITSRLGVSTAGCLEKRDMVERIRSCGRYREAAGVGR 396          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A836C9U0_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U0_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.490e-50
Identity = 97/219 (44.29%), Postives = 140/219 (63.93%), Query Frame = 1
Query:  184 PPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADELSHMSMRQLRSLMLQAGIEVE-GCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAASS 837
            PPPAS+ AL+ IP+V +   DL EE NR CS+CLDDH L     +LPCAHIFH+ECV +WL  +CTCP CR+ELETE+  +E  RR RM+GR  R+RRREL+  S+ ++R++A    V+  GCLEK D++  I  S   E+ E+  P+Y   +L  +++RQL+ +M   G+ +  G LE++DL+ ++ +S  + V         G A AA S  P++ S
Sbjct:    8 PPPASKKALRQIPEVLVTLDDLVEEANRCCSICLDDHMLAEVVCRLPCAHIFHKECVLDWLLRNCTCPACRYELETENAAFEAGRRQRMQGRTLRFRRRELELSSVARLRSIAGDLGVNTDGCLEKSDLIACIARSPRAEVFEAALPEYTHAQLMALTVRQLKDIMAGVGVLLATGVLEKADLIAQLANSGRIAVVDV------GAAAAAGSHCPSSPS 220          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A482S6I1_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6I1_9ARCH)

HSP 1 Score: 170 bits (431), Expect = 2.450e-45
Identity = 115/357 (32.21%), Postives = 176/357 (49.30%), Query Frame = 1
Query:  187 PPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETP-KYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLV------TVTHHDPFAPPGV-------AEAASS---PAPAASSPTVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHTSWSSIFNWGARSGTAGXXXXXXXXXXXXXXATTSPLESMSVKDLRVIMSKLGVTTQGCIEKRDMVERIRAC 1206
            PPAS  A+ N+P V + + DL EETN+ C  CL + ELG  A KLPC H++HR CV +WL+  CTCPVCR+ELET+D  YE +R+ RMK R+ R RR E+   S+ Q+R L  Q N+ IA C++KK+IV  +V SG++++ E   P +   ++ ++ S+ QL+ L+L  G+   G LE+ +L   +  S  +      TV   D              A++ASS   P+P+ SS   T                                               TS S + +                        TT+ L+ MS+  +R + ++LGV+T GC++K D+++R++ C
Sbjct:   64 PPASNRAINNLPSVIVTSDDLLEETNKECVFCLVEQELGSTACKLPCGHLYHRGCVVQWLQRKCTCPVCRYELETDDPQYETQRKKRMKTRKLRMRRDEIQSKSVAQLRQLCGQLNLTIAHCIDKKEIVDMMVASGLIDITERVPPIEISYEDFNNKSVSQLKHLLLSFGLSDAGALEKHELRKVLLESERIHIFDGETVVVDDDSMRTNTNSIVSYAADSASSYVDPSPSYSSSYTTTQPSPSSPLASPGVILTVSSSTATTP---------------------TSSSRVTH----------------------RFTTAELQDMSLSRIRSLCTELGVSTAGCLDKLDVIDRLKLC 377          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A8J2SU41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU41_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.370e-44
Identity = 85/201 (42.29%), Postives = 127/201 (63.18%), Query Frame = 1
Query:  181 GPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADE--LSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHD 777
            GPPP    AL+++P V     DLA++ NR C VCL+  E+G +A KLPC H+FH ECV +WL  H TCP CR+EL + D  +E  RR RM  R PRYRRREL+ L + ++R LA + +   AG  EK D+V++++++ +V+++  E  + DA    ++  S+RQL+ LM   G++   C+++ DL+D I +S LV     D
Sbjct:  140 GPPPMDEAALRDLPVVRATEEDLAKDGNRECCVCLEAQEVGDRATKLPCGHLFHTECVVQWLRKHGTCPSCRYELASSDAAFEASRRERMARRVPRYRRRELNRLPVRELRALAARGDRVFAGLTEKADLVKALIDANLVQIIPEEVRQLDATRAAVAAWSIRQLKQLMADVGVDSTRCVDKRDLVDAIAASGLVAFAADD 340          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S4A164_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A164_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.170e-42
Identity = 88/216 (40.74%), Postives = 128/216 (59.26%), Query Frame = 1
Query:  193 ASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRV--RMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETPKYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAAS 834
            AS  ALK IP V +AA DL ++ N  C++CL+DH  G  A +LPC H+FH++CV EWL  HC CPVCR+EL T+   YER RR   R  GRR R R+RELD ++I  + ++ +       GC+E+ D++R ++ S  V++V   T +    EL  MS+  +  L  +AG+ ++G LER D++  +  S  V +         G AE  +SP PAA+
Sbjct:   17 ASTSALKRIPIVRVAADDLTKD-NECCTICLEDHVPGELAARLPCGHLFHKDCVVEWLSRHCVCPVCRYELPTDSVVYERTRREHNREGGRRVRVRKRELDAMNIRALLDVLKAAGESARGCVERDDLIRRVLTSSRVDVVAETTVEVSRSELDAMSLGAVARLAKRAGVVIDGALERPDVVALLEQSGRVLIVD-------GAAEETTSPVPAAA 224          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7R9U2I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2I9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.240e-39
Identity = 89/262 (33.97%), Postives = 134/262 (51.15%), Query Frame = 1
Query:  172 RERGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNV-DIAGCLEKKDIVRSIVNSGMVELV-------------------ESETPKYDADE----------------------------------------------------LSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRI 741
            R  GPPPASR  L+N+P+V ++  DL  + N SC +C++DHELG  A KLPC HIFH EC+ +WL+ HCTCPVCRFEL TED  +E  RR RM GR+ +YRRREL+  S+ +I+++  +  V      L K D+++ +++S  ++L+                   E +  KY  ++                                                    LS  S+ +LRS+M + GI ++GC+E+SD++ +I
Sbjct:  173 RRTGPPPASRSVLRNLPEVKVSQVDLETDGNESCCICMEDHELGEMATKLPCGHIFHTECIKDWLQRHCTCPVCRFELPTEDAGFEEHRRERMGGRKRKYRRRELESKSVREIKHIMMEIGVRPPPDALMKSDLIQVLIDSEQIQLLPDTDGAAAGAEPSYGHVAREQDNRKYSPEQKQSTTEEKVDEAAATREGVRRRAGERGSGRSGAMPTAPSPRAAPRQESATEVLSKKSVSELRSIMRERGISLQGCIEKSDMVQKI 434          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S2XTC7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTC7_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.430e-39
Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 1
Query:  178 RGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETP-KYDADELSHMSMRQLRSLMLQAGIEVE--GCLERSDLLDRIRSSRLVTVTHHD 777
            +G PPAS+ A++ +P V +A  DL +E NR C +C + + L  +  +LPCAHIFH EC+  WL  HCTCPVCR+EL T+D  YER R  RMK R+PRY R EL+ +SI ++R L     V      EKKDIV++ V+S  ++++ +  P +Y A +L  M   QL+  M +AG+  +    LE+ D++    SS  V V   +
Sbjct:   51 KGAPPASQKAIRQLPTVIVAPEDLVDENNRECCICFEPNSLKDRVTRLPCAHIFHHECIKGWLTRHCTCPVCRYELPTDDSAYERTRVERMKHRKPRYARYELERMSISELRALGDFCKVS-RSFKEKKDIVQACVDSSRIDIIAAPEPVQYRASDLKQMKPGQLKKSMEKAGVFFDPIDVLEKDDMIRIFISSGRVDVLEEE 252          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S1WIB1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WIB1_ALECA)

HSP 1 Score: 150 bits (380), Expect = 1.270e-38
Identity = 106/374 (28.34%), Postives = 174/374 (46.52%), Query Frame = 1
Query:  172 RERGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESE------TPKYDAD-------------ELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTVTHHDPFAPPGVAEAASSPAPAASSPTVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHTSWSS--IFNWGARSGTAGXXXXXXXXXXXXXXATTSPLESMSVKDLRVIMSKLGVTTQGCIEKRDMVERIRACGRYREGLG 1230
            R+ GPPP S  AL+++P + + A+D+A   +  CS+CLD+  +G  A+++PC H++H +CV +WL+    CPVCRFEL T+D  YER R+ RM GR+ R R  +L   S+ ++  LA    VD+ GCLEK ++V  I  S +V+++ ++      +P   AD             +L  MS+ ++R+LM +  ++   C E++D++ R+  S  + V+     A  G    +S+P+P                                                      HT+ SS  +   G     AG                   L   SV +LR +  +LGV+  GC+EK ++V+RI A   +++  G
Sbjct:    9 RKTGPPPTSASALRSLPRIKVTAYDIAANESAECSICLDELVIGQPALRIPCGHLYHEDCVKDWLKKSNECPVCRFELPTDDAEYERGRKTRMAGRKLRMRHADLTVKSVQELSRLASFIGVDVRGCLEKSELVEKIAASSLVQIIPTDGVEVGGSPTSTADSSAPGRPSAFSQSQLDAMSIGEVRALMERLSVDSSDCAEKADMVRRLVLSGRILVSSEREAAATG----SSAPSPGRL---------------------------------------------------HTASSSSDVIMGGTEEAAAGVASANG----------AGNLSGKSVGELRRLAKQLGVSLDGCLEKVELVQRIEASPAFQQNSG 317          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A813F9X9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F9X9_POLGL)

HSP 1 Score: 147 bits (370), Expect = 2.610e-37
Identity = 73/215 (33.95%), Postives = 127/215 (59.07%), Query Frame = 1
Query:  175 ERGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESET------------------PKYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSSRLVTV 765
            ++G PPA+R  +K++P V + A+D+A   +  CSVCLD+  +G  A+++PC H++H +C+  WL+    CPVCR+EL T+D  YE+ R +RM  R+ R RR +L   +  ++R LA    VD+ GCLEK ++V  I  S  V+++ +E+                  PK+  ++L  M +  L+++M + G++   C E+++L+ ++ +S  V V
Sbjct:   22 QKGAPPAARTTMKSLPRVKVTAYDIAANESPECSVCLDELVIGETALRVPCGHLYHEDCIQGWLKKSNECPVCRWELPTDDVEYEKGRVMRMSSRKIRLRRTDLSVKTAQELRRLAHFIAVDVTGCLEKSELVDKIAQSPQVQIIAAESEASHPGSPSRASSSSASRPKFSREQLEAMGISDLKAIMERIGVDTSSCAEQAELVTKLMNSDRVEV 236          
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Match: A0A7S2SCZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCZ0_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.610e-37
Identity = 67/188 (35.64%), Postives = 118/188 (62.77%), Query Frame = 1
Query:  178 RGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHELGGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRMKGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMVELVESETP-KYDADELSHMSMRQLRSLMLQAGI--EVEGCLERSDLL 732
            R PPPA +  ++ +P + +   DL +E NR C +CL+++ L  + ++LPCAHI+H +C+ +WL   C+CP+CR+EL+T D  YE+ R  RMK R+PRY R EL+ + I  + +L  + N+   G  EK D++ +I+ SG ++++ +  P  +   +LS M + +L+  M  AG+  + +  +E+ D++
Sbjct:   47 RHPPPACKKIIRKLPIIKVTPEDLVDENNRECCICLEENNLNDRVLRLPCAHIYHSQCISDWLAKCCSCPICRYELQTNDSEYEKGRIERMKHRKPRYARYELERMKIRDLSSLCSRFNLSTNGMTEKADLICAILESGKIDVISAPKPVAHKLSDLSGMGVGKLKRAMADAGVFFDAKDVVEKEDMV 234          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS56_ECTSI3.300e-11361.39RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836C9U0_9STRA1.490e-5044.29RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A482S6I1_9ARCH2.450e-4532.21RING-type domain-containing protein n=1 Tax=archae... [more]
A0A8J2SU41_9STRA2.370e-4442.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A164_9STRA3.170e-4240.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U2I9_9STRA1.240e-3933.97Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XTC7_9STRA3.430e-3941.87Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1WIB1_ALECA1.270e-3828.34Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A813F9X9_POLGL2.610e-3733.95Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S2SCZ0_9STRA2.610e-3735.64Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:1389556..1393005 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue1.8e-93
Seed eggNOG ortholog2880.D8LS56
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-12_004750.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1244
Cds size1242
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19352.1prot_F-serratus_M_contig8.19352.1Fucus serratus malepolypeptideF-serratus_M_contig8 1389556..1393005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932384.2569268-CDS-F-serratus_M_contig8:1389555..13902001622932384.2569268-CDS-F-serratus_M_contig8:1389555..1390200Fucus serratus maleCDSF-serratus_M_contig8 1389556..1390200 -
1690964282.1518524-CDS-F-serratus_M_contig8:1389555..13902001690964282.1518524-CDS-F-serratus_M_contig8:1389555..1390200Fucus serratus maleCDSF-serratus_M_contig8 1389556..1390200 -
1622932384.3055906-CDS-F-serratus_M_contig8:1390522..13906121622932384.3055906-CDS-F-serratus_M_contig8:1390522..1390612Fucus serratus maleCDSF-serratus_M_contig8 1390523..1390612 -
1690964282.1678622-CDS-F-serratus_M_contig8:1390522..13906121690964282.1678622-CDS-F-serratus_M_contig8:1390522..1390612Fucus serratus maleCDSF-serratus_M_contig8 1390523..1390612 -
1622932384.3235335-CDS-F-serratus_M_contig8:1391118..13912791622932384.3235335-CDS-F-serratus_M_contig8:1391118..1391279Fucus serratus maleCDSF-serratus_M_contig8 1391119..1391279 -
1690964282.1805472-CDS-F-serratus_M_contig8:1391118..13912791690964282.1805472-CDS-F-serratus_M_contig8:1391118..1391279Fucus serratus maleCDSF-serratus_M_contig8 1391119..1391279 -
1622932384.3426096-CDS-F-serratus_M_contig8:1392030..13921451622932384.3426096-CDS-F-serratus_M_contig8:1392030..1392145Fucus serratus maleCDSF-serratus_M_contig8 1392031..1392145 -
1690964282.1905708-CDS-F-serratus_M_contig8:1392030..13921451690964282.1905708-CDS-F-serratus_M_contig8:1392030..1392145Fucus serratus maleCDSF-serratus_M_contig8 1392031..1392145 -
1622932384.3615682-CDS-F-serratus_M_contig8:1392458..13925371622932384.3615682-CDS-F-serratus_M_contig8:1392458..1392537Fucus serratus maleCDSF-serratus_M_contig8 1392459..1392537 -
1690964282.1999612-CDS-F-serratus_M_contig8:1392458..13925371690964282.1999612-CDS-F-serratus_M_contig8:1392458..1392537Fucus serratus maleCDSF-serratus_M_contig8 1392459..1392537 -
1622932384.3768563-CDS-F-serratus_M_contig8:1392853..13930051622932384.3768563-CDS-F-serratus_M_contig8:1392853..1393005Fucus serratus maleCDSF-serratus_M_contig8 1392854..1393005 -
1690964282.2097578-CDS-F-serratus_M_contig8:1392853..13930051690964282.2097578-CDS-F-serratus_M_contig8:1392853..1393005Fucus serratus maleCDSF-serratus_M_contig8 1392854..1393005 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8.19352.1

>prot_F-serratus_M_contig8.19352.1 ID=prot_F-serratus_M_contig8.19352.1|Name=mRNA_F-serratus_M_contig8.19352.1|organism=Fucus serratus male|type=polypeptide|length=414bp
QIYSDFVRAFIPRHDQQTSRNANRGVPQTRPPDAPQNLQFTPATMEEQRR
REMEQERRERGPPPASRVALKNIPDVTIAAHDLAEETNRSCSVCLDDHEL
GGKAVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDRNYERERRVRM
KGRRPRYRRRELDGLSIPQIRNLARQQNVDIAGCLEKKDIVRSIVNSGMV
ELVESETPKYDADELSHMSMRQLRSLMLQAGIEVEGCLERSDLLDRIRSS
RLVTVTHHDPFAPPGVAEAASSPAPAASSPTVTPATAPAFTPTAAPAAAP
ATAPTGEGGWMGGAWGGGGGDGGGDGGGGHTSWSSIFNWGARSGTAGASA
PSQAPAPAPSTATTSPLESMSVKDLRVIMSKLGVTTQGCIEKRDMVERIR
ACGRYREGLGGGR*
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mRNA from alignment at F-serratus_M_contig8:1389556..1393005-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8.19352.1 ID=mRNA_F-serratus_M_contig8.19352.1|Name=mRNA_F-serratus_M_contig8.19352.1|organism=Fucus serratus male|type=mRNA|length=3450bp|location=Sequence derived from alignment at F-serratus_M_contig8:1389556..1393005- (Fucus serratus male)
CAAATTTACAGCGATTTTGTCCGAGCCTTCATTCCTCGGCACGACCAGCA GACTTCCCGAAACGCGAACCGTGGAGTTCCGCAGACCCGCCCGCCCGACG CACCTCAAAATCTACAATTCACCCCGGCGACCATGGAAGAACAGCGGCGG CGGTGCGTGCGTCCCGTCGATGAAGGGAGGGTGCCGCCAACTGTACGATC CTTGATATCGTTTTTGAAACAAGTCTTCTAAGACATGCAAAATTGAATCG CTAACGCGCATACCGAAGAAAAGACTATGATGCCAAGTAATAGGTAATAT GTAGTGGTCAATCTCTGACGTATAGGACTGATACAAGGAGTGGAGCGGTA GCTGCGGCTGAGGGGCGTGCGTTGATCGATCGCTACAGGAAGAGGTGCCC TGACGTTGACGAGTGACGTGTTGCCGCCCCCTTTGTCGGTTACGCGCTAT CGCTGTCGGTTCGGTTAGAGAGATGGAGCAGGAGCGGAGAGAGCGTGGGC CCCCGCCAGCTAGCCGCGTCGCGCTGAAGAACATCCCGGATGTGACGGTG GGCTTCTTGTCGCAGCCTAGGTTTGGTATGTGTAGTATCGAATTGTCTAT AACCGCGCAATCCGACTCTGTTGTGATAATATAATATAGTAGTCGTATGC CACTCGCTTTGTGCGTGCGTGTGTGTGTGCGTGTGTGTGTGTGAAGAGCT CGCGACAGACTCGTTGCTTCAACGCACACCTCACGTTCACCACGTCCGGA CTATCGTAGACCACCTTGAGCGGTTAGGGCGTTAGGGGAACGTGCGATGG TTCAAAGGTGCATCACGAAAAGCCTCGCTTCCTACCGCCGACCCGTGCTT TGTTCTTCAGATTGCGGCGCATGACCTTGCTGAAGAAACGAACCGATCTT GCAGCGTCTGCTTGGACGATCACGAGCTCGGGGGAAAGGCGGTCAAGCTT CCATGCGCGCACATCTTTCACCGAGGTATATATATATACATGCAACATTT TATGCTTAAGTATAGTAGCAGGAGTCCCACCAATGGTACGTCTTTCGAAT GGCCCATGGTCACGTTTGACTGGGTCTTTGAATGGGAGTGCAGCGAAGCC ATTGCGCAAAAGGTTTTGGTGTGTGGGAGGGAGCCTGGCCACGCTTTACG TTTATATCATCCCGGCACGACGAGGGCCCGAGCTCGAAGTGCGCTCAACA CCGAAATGAGCCTAACTGGGGCACATTGCTGCAGTACCTCTACATTACAA CATTATTAGTAGGAACGCTGCTGTAGTACTGCTGCTGAGGGGACGCCTCA GGGGATGCCCGGCTCGAAACGACGATGAATCAGTTCCGTCTTTTACCGAA ACGGGCGCTGGTCGTAGCCGCTTGAAACCTTGCGATTTTTTCCGGTGGAC CCTTGCCCCTGATGCAAAACCTGTGGCTCAAGGTCGTGTGTACGAAAAGG CGGTAGGATGGCAGTTAACGACTCGAAACAAGTATGGTATACCGTTAGTA TAGAGAGCGTTATCATCACGGAAGGGGCGGGGGGGGCAGTCGTCCTCGTT CAATATTTTCGATCCACACAATAAATAAAAGCCAAAGGCGCCACACACCA AAACCTTTGCGCGCGCTAAGCGGCCCTCATCCACATCCACCGCCCACAAT GCCTCTTCGTTGGCTTTGAATGCACTTACAACACACATTTTTACATTCGT CGCGCATTCTAAAATCACCAAAAAAGAGTGTGTCTGGGAGTGGCTGGAGT TGCACTGCACTTGTCCCGTGTGCCGGTTCGAGCTGGAGACGGAAGACCGA AACTACGAGAGGGAGCGGAGAGTGAGAATGAAGGGAAGGCGGCCGCGCTA TCGCCGCCGAGAGCTGGACGGGCTCAGCATTCCTCAGGTGACTTGGGGCA CGAGGGGAGGGGGGATTATGTTGGAAATATTTTTCTGTTTTTCGTTTTTC GCGCGGCGAGTTGGCGTTTTGTTTTTCGTGGGCTGTGATTTTTGAACGAG CTTCCTTCGGTTGTGGATTGTGGTGGAGAATCGAGTCTATTAATAGCATG CTGTTCTGTACCGCTGCGGGAGCCCGACCCGCACACGGTACGGATGATAC GGCACATATCATACGATACGTTGATGCCATCAAGAGCGAGTGTACGGGTG TGTTCACAGCCGTGCGGCTCGCTTCTCTCATTTTTATCTATCAAAAAGAA GGCGACTCTCGTTACGACTCGCTGTCCGAACACCCCCCCACCCCCCTTCC CTCGTGCCCTTCTGTCGTTCTTCGACACGCGTCTTATACATTTCTCTTGT AGTCCTTCTGCCCTTCGTGGCGATGTTCGCCCATACTCTTTGACACGATG CTCGACCTCCTATCTCTGTCCTTGCGCGTTCTGGCGCGAAAAGATACGGA ACCTCGCGCGACAGCAAAACGTCGACATCGCTGGTTGCCTCGAGAAAAAA GACATCGTCAGGTCCATCGTCAACTCCGGGATGGTGAGCGCTCGGTCTCC GTGAATCTAGTCCCGCGGCGTCGGCGTCCGTCCGATTGATCGTCGTCATT GTAACGCTATCGCTGTAGAAACCTTGGAGGACTACCGAGAGCAGGCGCCT CACGAGCGGTGTTTTTTGTGCTTTGTCTCGGGTTTGATGCTCCGTCAAAG CTTCAATGTTTGCGATGGAGAGGCGTAAAAACGACACTATCGTTTCCTAC CCGCTTTGGAAGAGCTTGATATTCTTTGCACATCTCACGAATATTAATAG GACATGTGCCGATAAACTCGCTCCTTCCCCCCCCCCCCCCCCGCTCCCTA AAAAGGTGGAATTGGTTGAGTCGGAGACGCCGAAGTACGACGCGGACGAG CTGTCCCATATGTCCATGCGGCAGCTGCGGTCCCTCATGCTCCAGGCAGG CATCGAGGTGGAGGGCTGCCTCGAAAGATCCGACCTCCTCGATCGCATCC GGAGCTCGCGCCTCGTCACGGTGACACACCACGACCCGTTCGCGCCCCCT GGCGTGGCGGAAGCCGCCTCCTCTCCAGCGCCCGCTGCTTCTTCTCCTAC TGTTACGCCTGCTACTGCTCCTGCCTTTACTCCTACTGCTGCTCCTGCCG CTGCTCCTGCCACTGCTCCTACCGGAGAAGGGGGATGGATGGGGGGAGCC TGGGGTGGGGGGGGTGGCGACGGAGGCGGGGATGGAGGTGGAGGGCACAC TTCGTGGTCGTCGATATTCAACTGGGGAGCACGATCGGGGACAGCAGGGG CGAGTGCGCCATCGCAAGCCCCCGCGCCCGCGCCGTCGACGGCAACCACC TCGCCCCTGGAGAGCATGTCTGTCAAAGACTTGCGGGTGATTATGAGCAA ACTGGGCGTGACCACGCAAGGGTGTATCGAGAAGCGGGATATGGTGGAAC GAATCAGGGCTTGTGGGAGGTATCGCGAGGGACTAGGCGGAGGGAGATGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig8:1389556..1393005-

>mRNA_F-serratus_M_contig8.19352.1 ID=mRNA_F-serratus_M_contig8.19352.1|Name=mRNA_F-serratus_M_contig8.19352.1|organism=Fucus serratus male|type=CDS|length=2484bp|location=Sequence derived from alignment at F-serratus_M_contig8:1389556..1393005- (Fucus serratus male)
CAAATTTACAGCGATTTTGTCCGAGCCTTCATTCCTCGGCACGACCAGCA
GACTTCCCGAAACGCGAACCGTGGAGTTCCGCAGACCCGCCCGCCCGACG
CACCTCAAAATCTACAATTCACCCCGGCGACCATGGAAGAACAGCGGCGG
CGCAAATTTACAGCGATTTTGTCCGAGCCTTCATTCCTCGGCACGACCAG
CAGACTTCCCGAAACGCGAACCGTGGAGTTCCGCAGACCCGCCCGCCCGA
CGCACCTCAAAATCTACAATTCACCCCGGCGACCATGGAAGAACAGCGGC
GGCGAGAGATGGAGCAGGAGCGGAGAGAGCGTGGGCCCCCGCCAGCTAGC
CGCGTCGCGCTGAAGAACATCCCGGATGTGACGAGAGATGGAGCAGGAGC
GGAGAGAGCGTGGGCCCCCGCCAGCTAGCCGCGTCGCGCTGAAGAACATC
CCGGATGTGACGATTGCGGCGCATGACCTTGCTGAAGAAACGAACCGATC
TTGCAGCGTCTGCTTGGACGATCACGAGCTCGGGGGAAAGGCGGTCAAGC
TTCCATGCGCGCACATCTTTCACCGAGATTGCGGCGCATGACCTTGCTGA
AGAAACGAACCGATCTTGCAGCGTCTGCTTGGACGATCACGAGCTCGGGG
GAAAGGCGGTCAAGCTTCCATGCGCGCACATCTTTCACCGAGAGTGTGTC
TGGGAGTGGCTGGAGTTGCACTGCACTTGTCCCGTGTGCCGGTTCGAGCT
GGAGACGGAAGACCGAAACTACGAGAGGGAGCGGAGAGTGAGAATGAAGG
GAAGGCGGCCGCGCTATCGCCGCCGAGAGCTGGACGGGCTCAGCATTCCT
CAGAGTGTGTCTGGGAGTGGCTGGAGTTGCACTGCACTTGTCCCGTGTGC
CGGTTCGAGCTGGAGACGGAAGACCGAAACTACGAGAGGGAGCGGAGAGT
GAGAATGAAGGGAAGGCGGCCGCGCTATCGCCGCCGAGAGCTGGACGGGC
TCAGCATTCCTCAGATACGGAACCTCGCGCGACAGCAAAACGTCGACATC
GCTGGTTGCCTCGAGAAAAAAGACATCGTCAGGTCCATCGTCAACTCCGG
GATGATACGGAACCTCGCGCGACAGCAAAACGTCGACATCGCTGGTTGCC
TCGAGAAAAAAGACATCGTCAGGTCCATCGTCAACTCCGGGATGGTGGAA
TTGGTTGAGTCGGAGACGCCGAAGTACGACGCGGACGAGCTGTCCCATAT
GTCCATGCGGCAGCTGCGGTCCCTCATGCTCCAGGCAGGCATCGAGGTGG
AGGGCTGCCTCGAAAGATCCGACCTCCTCGATCGCATCCGGAGCTCGCGC
CTCGTCACGGTGACACACCACGACCCGTTCGCGCCCCCTGGCGTGGCGGA
AGCCGCCTCCTCTCCAGCGCCCGCTGCTTCTTCTCCTACTGTTACGCCTG
CTACTGCTCCTGCCTTTACTCCTACTGCTGCTCCTGCCGCTGCTCCTGCC
ACTGCTCCTACCGGAGAAGGGGGATGGATGGGGGGAGCCTGGGGTGGGGG
GGGTGGCGACGGAGGCGGGGATGGAGGTGGAGGGCACACTTCGTGGTCGT
CGATATTCAACTGGGGAGCACGATCGGGGACAGCAGGGGCGAGTGCGCCA
TCGCAAGCCCCCGCGCCCGCGCCGTCGACGGCAACCACCTCGCCCCTGGA
GAGCATGTCTGTCAAAGACTTGCGGGTGATTATGAGCAAACTGGGCGTGA
CCACGCAAGGGTGTATCGAGAAGCGGGATATGGTGGAACGAATCAGGGCT
TGTGGGAGGTATCGCGAGGGACTAGGCGGAGGGAGATGAGTGGAATTGGT
TGAGTCGGAGACGCCGAAGTACGACGCGGACGAGCTGTCCCATATGTCCA
TGCGGCAGCTGCGGTCCCTCATGCTCCAGGCAGGCATCGAGGTGGAGGGC
TGCCTCGAAAGATCCGACCTCCTCGATCGCATCCGGAGCTCGCGCCTCGT
CACGGTGACACACCACGACCCGTTCGCGCCCCCTGGCGTGGCGGAAGCCG
CCTCCTCTCCAGCGCCCGCTGCTTCTTCTCCTACTGTTACGCCTGCTACT
GCTCCTGCCTTTACTCCTACTGCTGCTCCTGCCGCTGCTCCTGCCACTGC
TCCTACCGGAGAAGGGGGATGGATGGGGGGAGCCTGGGGTGGGGGGGGTG
GCGACGGAGGCGGGGATGGAGGTGGAGGGCACACTTCGTGGTCGTCGATA
TTCAACTGGGGAGCACGATCGGGGACAGCAGGGGCGAGTGCGCCATCGCA
AGCCCCCGCGCCCGCGCCGTCGACGGCAACCACCTCGCCCCTGGAGAGCA
TGTCTGTCAAAGACTTGCGGGTGATTATGAGCAAACTGGGCGTGACCACG
CAAGGGTGTATCGAGAAGCGGGATATGGTGGAACGAATCAGGGCTTGTGG
GAGGTATCGCGAGGGACTAGGCGGAGGGAGATGA
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