mRNA_F-serratus_M_contig8.19351.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8.19351.1
Unique NamemRNA_F-serratus_M_contig8.19351.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A7S2XZP0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZP0_9STRA)

HSP 1 Score: 326 bits (836), Expect = 3.910e-110
Identity = 182/266 (68.42%), Postives = 208/266 (78.20%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPAVERLTSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            MIPP+ SLVKY+NP+L+ST       +D  KG KK+ +   VER T+QTEDILNSILPPREWT+DGQLWVQYVSSTPATRLDV NLQEQLDQKLQQRQARETGICPIREELY+QCF                       +ELIRQVTINCAERGLLLLRVRDEIHMTIAAYQT+YESSIAFG+RK L+AEQ+KAEM AKI+QL+ E  +L+QQ+ EL+A+ E +K +EEERR  DE  H  EVD LK+TN+QLK  LEQMLSAPKK
Sbjct:    1 MIPPHNSLVKYDNPILVSTT------KDKGKGAKKRSQLAPVERQTTQTEDILNSILPPREWTEDGQLWVQYVSSTPATRLDVINLQEQLDQKLQQRQARETGICPIREELYAQCF-----------------------DELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTLYESSIAFGMRKALMAEQKKAEMDAKIRQLETENDELDQQIGELSARIEMVKRKEEERREQDERGHAEEVDNLKKTNEQLKQSLEQMLSAPKK 237
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: D8LS54_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS54_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 7.630e-106
Identity = 173/231 (74.89%), Postives = 189/231 (81.82%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPAVERLTSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEER 693
            MIPP+ SLVKY+NP+L+ST     T     KG KKK +AP VER +SQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICP+REELYSQCF                       +ELIRQVTINCAERGLLLLRVRDEIHMTIAAYQT+YESSIAFGIRK L+AEQRKAEM AKI+QLQE+KADLE+QV EL+AKCE++KPRE ER
Sbjct:    1 MIPPHNSLVKYDNPILVST-----TGNRGGKGAKKKGQAPTVERPSSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPVREELYSQCF-----------------------DELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTMYESSIAFGIRKALIAEQRKAEMEAKIRQLQEDKADLERQVTELSAKCEQVKPREAER 203
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A7S2C1N4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1N4_9STRA)

HSP 1 Score: 306 bits (783), Expect = 4.770e-102
Identity = 171/267 (64.04%), Postives = 205/267 (76.78%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKA-PAVERLTSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            MIPP+ SLVKY+N +L+ST       ++  K  KKK ++ P VER ++QTEDILNSILPPREWT+DGQLWVQYVSSTPATRLDV NLQEQLD+KLQQRQARETGICP+REELY+QCF                       +ELIRQ+TINCAERGLLLLRVRDEI MTIAAYQT+YESSIAFG+RK L+AE RKAEM AK++QL+ EK DLE+QV +LT K E ++ +E E+R  DE +H  EV++LK+ N QLKT LE MLSAP++
Sbjct:    1 MIPPHESLVKYDNAILVSTT------KEKQKNSKKKQQSLPPVERQSTQTEDILNSILPPREWTEDGQLWVQYVSSTPATRLDVINLQEQLDRKLQQRQARETGICPVREELYAQCF-----------------------DELIRQITINCAERGLLLLRVRDEIRMTIAAYQTLYESSIAFGMRKALMAEYRKAEMEAKVKQLESEKEDLERQVSDLTLKLESVQKKEAEKRAYDEKRHAEEVEKLKQVNAQLKTNLESMLSAPQR 238
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: F0XX65_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX65_AURAN)

HSP 1 Score: 305 bits (782), Expect = 7.000e-102
Identity = 175/270 (64.81%), Postives = 200/270 (74.07%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPA----VERLTSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            MIPP+ SLVKY+NP+L+ST           KGGK     P+    VER  +QTEDILNSILPPREWT+DG LWVQYVSSTPATRLDV NLQEQLD+KLQQRQARETGICPIREELY+QCF                       +E+IRQVTINCAERGLLLLRVRDEI MTIAAYQT+YESSIAFG+RK L+AE RKAEM  K++ L+ EK DLE+QV ELT +C+ IK REEERR AD  KH  EV + K+ N+QLKT LE MLSAP++
Sbjct:    1 MIPPHDSLVKYDNPILVSTTK--------EKGGKXXXTTPSSLPPVERANTQTEDILNSILPPREWTEDGTLWVQYVSSTPATRLDVINLQEQLDRKLQQRQARETGICPIREELYAQCF-----------------------DEVIRQVTINCAERGLLLLRVRDEIRMTIAAYQTLYESSIAFGMRKALMAEHRKAEMQNKVKLLEGEKEDLERQVSELTERCKLIKEREEERRKADAAKHEEEVTKYKKINEQLKTNLEAMLSAPQR 239
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A836CKF3_9STRA (Axonemal dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKF3_9STRA)

HSP 1 Score: 303 bits (776), Expect = 4.650e-101
Identity = 172/265 (64.91%), Postives = 201/265 (75.85%), Query Frame = 1 
Query:    7 PPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPAVERLTSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQ-EQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            PP++SLVKY+ PVL+ST           K GK K +   +E+ T+QTEDILNSILPPREWT +GQLWVQYVSSTPATRLD+ NLQ EQLD KLQQRQARETGICP+REELY+QCF                       +ELIRQVTINCAERGLLLLRVRDEIHMT+AAYQT+YESSIAFG+RK L+AEQRKAEM A+I+QL+E++ DLE +V E+  KCE+I+ RE ERR ADE  H  EV+ LKRTN QL+  LEQ+LSAPKK
Sbjct:    1 PPHSSLVKYDTPVLVSTTQ--------GKKGKGKAQQSGLEKQTTQTEDILNSILPPREWTSNGQLWVQYVSSTPATRLDIINLQQEQLDHKLQQRQARETGICPVREELYAQCF-----------------------DELIRQVTINCAERGLLLLRVRDEIHMTVAAYQTLYESSIAFGMRKALIAEQRKAEMHARIRQLREDRDDLEARVAEMADKCEQIQRREVERRAADERAHQDEVEHLKRTNLQLRQTLEQLLSAPKK 234
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A7S3LVC4_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LVC4_9EUKA)

HSP 1 Score: 298 bits (764), Expect = 5.720e-99
Identity = 173/263 (65.78%), Postives = 196/263 (74.52%), Query Frame = 1 
Query:   19 SLVKYNNPVLISTRNTTSTNRDSNKGGKK--KIKAPAVERL-TSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            SLVKY+ PVL+ST           KG K   K K P VE+  TSQTEDILNSILPPREWT+DGQLWVQYVSSTPATRLDV NLQEQLDQKLQQRQARETGICPIREELYSQCF                       +ELIRQ+TINCAERGLLLLRVRDEI MTIAAYQT+YESS+AFG+RK L+AEQ KA+M A+I+QL+ +K DLE+QV EL  KC+ I+ RE ERRV DE KH  +V QLKR N QLK++LE +L+ P K
Sbjct:   12 SLVKYDTPVLVSTTKDKKGKGAQQKGQKAATKKKLPPVEKPPTSQTEDILNSILPPREWTEDGQLWVQYVSSTPATRLDVINLQEQLDQKLQQRQARETGICPIREELYSQCF-----------------------DELIRQITINCAERGLLLLRVRDEIRMTIAAYQTLYESSVAFGMRKALMAEQHKADMEARIKQLESDKRDLERQVQELMVKCDTIEKRESERRVQDEKKHQEDVQQLKRQNAQLKSQLESILAPPAK 251
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A7S2SN15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN15_9STRA)

HSP 1 Score: 295 bits (755), Expect = 1.420e-97
Identity = 164/266 (61.65%), Postives = 198/266 (74.44%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPAVERLTSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            M PP+ SLVKY+N +L+ST    +  +     GKK  + P VER  +QTEDILNSILPPREWT+DGQLWVQYVSSTPATRLDV  LQEQLD+KLQQRQARETGICPIREELY+QCF                       +ELIRQ+TINCAERGLLLLRVRDEI MT+AAYQT+YESSIAFG+RK L+AE RK EM  K++ L+ ++ DL +QV ELT KC++I+  ++ERR AD+ KH  EVD+LK+ N  LKT LE +LSAP++
Sbjct:   15 MNPPHDSLVKYDNAILVST----TKEKQKKSKGKKGQQLPPVERQGTQTEDILNSILPPREWTEDGQLWVQYVSSTPATRLDVITLQEQLDRKLQQRQARETGICPIREELYAQCF-----------------------DELIRQITINCAERGLLLLRVRDEIRMTVAAYQTLYESSIAFGMRKALMAEYRKTEMENKVKSLEADREDLTRQVAELTEKCKEIQQTQQERREADDKKHQEEVDKLKQVNQSLKTNLESLLSAPQR 253
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A8J2T3N5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T3N5_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.530e-93
Identity = 162/266 (60.90%), Postives = 194/266 (72.93%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPAVERLTSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            MIPP+ SLVKY++PV+++T       R + K GKK    P  E+ ++QTEDILNSILPPREWT+DG LWVQYVSSTPATRLDV NLQE LD+KLQQRQARETGICP+REELY+QCF                       +E+IRQVTINCAERGLLLLRVRDE+ MTIAAYQT+YESSIAFG+RK L AE  KAE+  K++ L+ E+ DLE QV EL  +CE IK RE +RR  D+  H  EVD+ K+ N+QLK  LE MLSAP++
Sbjct:    4 MIPPHDSLVKYHSPVVVTTA------RAAPKKGKKGPATP--EKASTQTEDILNSILPPREWTEDGTLWVQYVSSTPATRLDVVNLQESLDRKLQQRQARETGICPVREELYAQCF-----------------------DEVIRQVTINCAERGLLLLRVRDEVRMTIAAYQTLYESSIAFGMRKALTAEHTKAELNNKVRTLEAEREDLEGQVKELQERCESIKDREAKRREEDDAAHAEEVDKFKKINEQLKANLEAMLSAPQR 238
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BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A024TBG4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TBG4_9STRA)

HSP 1 Score: 281 bits (718), Expect = 6.950e-92
Identity = 161/282 (57.09%), Postives = 197/282 (69.86%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKK-------IKAPAVERL----------TSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPK 795
            M+PP++SLVKY++P+LIST           KG   K       +  P  +            +SQTEDILNSILPP+EWT+DGQLWVQYVSSTPATRLDV NLQEQLD +LQQ+QARETGICP+REELY+QCF                       +ELIRQ+TINCAERGLLLLRVR EI MTIAAYQT+YESSIAFG+RK L+AEQ+K +   K++QL+ ++ +L  QV EL  +C+ I+ REEE+R++DE KHN EVD LK+ NDQLK  LE +LSAPK
Sbjct:    1 MLPPHSSLVKYDSPILISTTKDKKGGHSGKKGKTAKGATAESHVSTPTKQASGGIPSIANASSSQTEDILNSILPPKEWTEDGQLWVQYVSSTPATRLDVINLQEQLDMRLQQKQARETGICPVREELYAQCF-----------------------DELIRQITINCAERGLLLLRVRVEIRMTIAAYQTLYESSIAFGMRKALMAEQKKLDAEQKLKQLETDRNELIAQVEELKLRCDAIQKREEEKRLSDEKKHNDEVDILKKANDQLKANLESLLSAPK 259
[Close]
BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Match: A0A7S0N8F2_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N8F2_9CHLO)

HSP 1 Score: 276 bits (706), Expect = 2.520e-90
Identity = 164/267 (61.42%), Postives = 190/267 (71.16%), Query Frame = 1 
Query:    1 MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPAVERL-TSQTEDILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQARETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINCAERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKIQQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTNDQLKTKLEQMLSAPKK 798
            MIPP  SLVKY+NPVL+ST   T   R  +K  KK    P  ++   SQTEDILNSILPPREWT+DGQLWVQYVSSTPATRLDV NLQE+LDQ+LQQRQARETGICP+REELY+QCF                       +ELIRQVTINCAERGLLLLRVRDE+ MTIAAYQT+YESS+AFG+RK L  EQ KA+M AKIQ L+ E+ +LE+Q+ E  AK E I+ RE ER   +E KH  EV  L R + QLK +LE  L+  KK
Sbjct:    1 MIPPLQSLVKYDNPVLVST---TKDKRGKDKKSKKGPLPPVEQKPGLSQTEDILNSILPPREWTEDGQLWVQYVSSTPATRLDVINLQERLDQQLQQRQARETGICPVREELYAQCF-----------------------DELIRQVTINCAERGLLLLRVRDEMRMTIAAYQTLYESSVAFGMRKALQTEQGKADMEAKIQMLESEQKELERQLAEWKAKSEAIEKRESERHALNEKKHAEEVAYLNRAHKQLKQQLETFLAPGKK 241
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XZP0_9STRA3.910e-11068.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LS54_ECTSI7.630e-10674.89p28, 28 kDa light chain of axonemal inner dynein a... [more]
A0A7S2C1N4_9STRA4.770e-10264.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0XX65_AURAN7.000e-10264.81Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836CKF3_9STRA4.650e-10164.91Axonemal dynein light chain n=1 Tax=Tribonema minu... [more]
A0A7S3LVC4_9EUKA5.720e-9965.78Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S2SN15_9STRA1.420e-9761.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2T3N5_9STRA1.530e-9360.90Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A024TBG4_9STRA6.950e-9257.09Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A7S0N8F2_9CHLO2.520e-9061.42Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:1384546..1388311 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score306.6
Seed ortholog evalue1.1e-80
Seed eggNOG ortholog44056.XP_009032194.1
Preferred nameIDA4
KEGG koko:K10410
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036156,GO:0036159,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0045504,GO:0048870,GO:0051179,GO:0051674,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG4001@1,KOG4001@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons6
Model size801
Cds size801
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19351.1prot_F-serratus_M_contig8.19351.1Fucus serratus malepolypeptideF-serratus_M_contig8 1384546..1388311 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932384.0431452-CDS-F-serratus_M_contig8:1384545..13847241622932384.0431452-CDS-F-serratus_M_contig8:1384545..1384724Fucus serratus maleCDSF-serratus_M_contig8 1384546..1384724 +
1690964282.0727057-CDS-F-serratus_M_contig8:1384545..13847241690964282.0727057-CDS-F-serratus_M_contig8:1384545..1384724Fucus serratus maleCDSF-serratus_M_contig8 1384546..1384724 +
1622932384.0689752-CDS-F-serratus_M_contig8:1385214..13853841622932384.0689752-CDS-F-serratus_M_contig8:1385214..1385384Fucus serratus maleCDSF-serratus_M_contig8 1385215..1385384 +
1690964282.0847676-CDS-F-serratus_M_contig8:1385214..13853841690964282.0847676-CDS-F-serratus_M_contig8:1385214..1385384Fucus serratus maleCDSF-serratus_M_contig8 1385215..1385384 +
1622932384.0973217-CDS-F-serratus_M_contig8:1386063..13861321622932384.0973217-CDS-F-serratus_M_contig8:1386063..1386132Fucus serratus maleCDSF-serratus_M_contig8 1386064..1386132 +
1690964282.097094-CDS-F-serratus_M_contig8:1386063..13861321690964282.097094-CDS-F-serratus_M_contig8:1386063..1386132Fucus serratus maleCDSF-serratus_M_contig8 1386064..1386132 +
1622932384.1175058-CDS-F-serratus_M_contig8:1386313..13864921622932384.1175058-CDS-F-serratus_M_contig8:1386313..1386492Fucus serratus maleCDSF-serratus_M_contig8 1386314..1386492 +
1690964282.1066988-CDS-F-serratus_M_contig8:1386313..13864921690964282.1066988-CDS-F-serratus_M_contig8:1386313..1386492Fucus serratus maleCDSF-serratus_M_contig8 1386314..1386492 +
1622932384.138426-CDS-F-serratus_M_contig8:1387786..13878811622932384.138426-CDS-F-serratus_M_contig8:1387786..1387881Fucus serratus maleCDSF-serratus_M_contig8 1387787..1387881 +
1690964282.1177726-CDS-F-serratus_M_contig8:1387786..13878811690964282.1177726-CDS-F-serratus_M_contig8:1387786..1387881Fucus serratus maleCDSF-serratus_M_contig8 1387787..1387881 +
1622932384.1633701-CDS-F-serratus_M_contig8:1388202..13883111622932384.1633701-CDS-F-serratus_M_contig8:1388202..1388311Fucus serratus maleCDSF-serratus_M_contig8 1388203..1388311 +
1690964282.1385303-CDS-F-serratus_M_contig8:1388202..13883111690964282.1385303-CDS-F-serratus_M_contig8:1388202..1388311Fucus serratus maleCDSF-serratus_M_contig8 1388203..1388311 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8.19351.1

>prot_F-serratus_M_contig8.19351.1 ID=prot_F-serratus_M_contig8.19351.1|Name=mRNA_F-serratus_M_contig8.19351.1|organism=Fucus serratus male|type=polypeptide|length=267bp
MIPPYTSLVKYNNPVLISTRNTTSTNRDSNKGGKKKIKAPAVERLTSQTE
DILNSILPPREWTDDGQLWVQYVSSTPATRLDVTNLQEQLDQKLQQRQAR
ETGICPIREELYSQCFVRIFRRRRSIRRTKIKVVLRSLRNELIRQVTINC
AERGLLLLRVRDEIHMTIAAYQTIYESSIAFGIRKTLVAEQRKAEMAAKI
QQLQEEKADLEQQVMELTAKCEKIKPREEERRVADETKHNAEVDQLKRTN
DQLKTKLEQMLSAPKK*
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mRNA from alignment at F-serratus_M_contig8:1384546..1388311+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8.19351.1 ID=mRNA_F-serratus_M_contig8.19351.1|Name=mRNA_F-serratus_M_contig8.19351.1|organism=Fucus serratus male|type=mRNA|length=3766bp|location=Sequence derived from alignment at F-serratus_M_contig8:1384546..1388311+ (Fucus serratus male)
ATGATACCGCCCTACACCTCACTGGTGAAGTATAACAACCCGGTGCTCAT
AAGCACAAGAAACACCACCAGCACGAATCGTGACAGCAATAAGGGAGGGA
AGAAGAAAATAAAGGCTCCGGCCGTCGAGCGTCTCACCTCCCAGACAGAG
GATATCCTCAACTCCATTCTACCCCCAAGGTGTACCTGAAACGTCTGATT
TGTTGTGGCGTAATAGGTATCGCGTTCGGTTCGATTGAATATGGGGCGCA
GTCGGAATTGGAGGGTTAGTTCCCTAGCGACAAGTCGTTCCTCTCTTTTA
TCTGATTCATCGGTGTGGATTTCTCTATTACTAATATTATCAGCTAAGGC
GCCTCGATGTTGTTAAAAAATGAAAACAACGATATTTTGTTTTAACTGTG
AGCCGGAGAGGAGAGTTCGGGTTGCTGCTAAGCAAGCGCACAACAGCGTA
CGAAAACGAAAACGCCTGATCTGTGCTGCGTAGAGAAGCGACAGTGCCTG
TCGTATTCATGGTCGTTAGTGGACGCAACGAATCGCAGAAAAAAAAATAA
GTTCCTTCTTTGATCCTCGCAAACGAAAAGAGGCTGCAGCTCAGGCGATG
ATTGCTGTGTTGTTAGTTTTCTTGTCACGGGGTGTCGAATTACCGTTGTT
ACCTCGCCGCCGATCAAAGGGAATGGACAGACGACGGACAGCTGTGGGTG
CAATACGTCTCGAGCACGCCGGCGACTCGCCTAGATGTTACCAATCTTCA
GGAGCAGCTGGACCAGAAATTGCAGCAACGGCAGGCGAGGGAGACAGGAA
TCTGCCCGATCAGGGAGGAGCTTTACTCCCAGTGCTTTGGTGAGTATTAT
TAGCAGTATATTGTATGCTGTATACTGTATACTGTACGCACGAGTCGATC
TAGACGGGGCACAAGTTGGGACGAGAAACCAGCCAAGACAACGTTCACGC
CGCCAGCGCCCACCGGATCTTTCGCACACCTTCGGGCGTTCAATCGCGGG
GTGCGGGGGGGACTATTAATTTTAGGGACATATGAGGTTCTGCGTGTGTG
TCGTTCAAGTACGCCGTGCCGAGTTTGATTTGCTCTCCTTCTGGAAGATC
ACACCATTAATAATTGAATTCAGTACGAAAATCGAAGACATATCGGATCG
ATCCGTCGATTTGTCTTGCTTGGATCTCAACGGCATGAGAATACAGGTAC
CTGAATCAGATGTCGCCAAATGCTGCTGTAGTGTACTCGCACACAAAAAA
CGGTCGGGGATAGGGGGGCGGGGGGGTTGAGTGCGGGAGGGTTATATATT
TTGGTGAGCGGCCAATAGCTCGAGAATCTTCTACGTGTTGCTCTACCTAT
GTCCGGAGTTTGATGAATAGAATACTGTATTATAAGCATAATTATGCCCT
ACATGTTCTTTGAATACTAACAACTCTATTATATTACTTTGGttTATCAT
CCTGGGCGTAAAAATGGTCGACGCCGACCTATTGCTTCTTGCTGAATTAC
CCATTGGTTGTAACGTAGTTCGAATTTTCCGACGAAGGCGTAGTATCCGT
CGCACCAAAATCAAAGTCGTTCTTCGCTCGCTCCGGAGTTGAAACCCAGC
TGGTGGCTTATCCACAGACACCATCATACGAATGCTGACGGCTTGTCTGA
TAAAGAGCCCAACTCCTCGTTGCTCACGTCGGTAACGCTACGTCGGTAAC
GCTCTCTCTCTCGTGAACCTTTGCTCCCTAATGATTCAATGACGATCATC
GTGGTGGCGTGGGGGAAGATGAGCTGATCAGACAGGTCACGATCAACTGC
GCAGAGCGAGGGCTGCTCCTGCTTCGCGTGAGAGACGAAATCCACATGAC
CATTGCAGCGTACCAGACCATATACGAATCCAGCATTGCCTTCGGCATAC
GCAAGACACTCGTCGCCGAGCAGCGGAAGGCAGAGATGGCAGCCAAGGTG
GGGATGCGTTCGGCCGCGAGGTGTCTCACATTTGACGTTACCAATCCGCG
GTGCATGCAAGTGAACGACTTCTGATTGCAGTATACTAAAAGCCTCCGAT
AATGTATATATCACGCAAGTCCACTACAGACTAATATACCAGGGTAATAA
TTAATAATTAATAGGAAATGGCTATTTGCCCCACCGGTGGGCCATTCCCA
AATTTACCCCACCACCTCGATCTCGCGTCAGAAGACACGAATGGTCACAG
TACATGTATGAGTGCGTTGGCGCGTCGCAGGGCTATCATGGGGTCTATCG
TGCAGCCCAAACGGTCCTGTCTACGTGCTGTTACGGCCGGTGGGGCGGTT
GGTGTTTTCTGGTATGTAAGGGCAAATAGCCAAACATACCAGAAAACACC
AACCACCTCACCGGCCGTGGCAGCACGTAGACAGGACCGTTTGGGCTGCA
CGATAGACCCCATGATAGCTAACCCTAACCCTATCACATCCATGCATGTA
CTATGACCAACCAAGTCTTCTGACGCGAGAACCAGGTGGGGGGGTAAACA
AGAGAATAGGCCACCGGTGGGGCAAATAGCCATACCGTAATTAATACCGA
TGATGGTTGTGGGAAAAGAGGGGCGCATATTATTTGGTCCATGGGGATAC
CTGAAAAGGCAACATATCCGTTACGGGAACTGCCTTGAGGGCTACCGGCC
CCGTGCCAGCCAACTCTCGCTAGTGAACGCCATCAGTACGCAATTGCGTG
ACCTGATAAAACTCAGGACTGGCTCCAAGGAGGTTGGCGTTATAAATGAA
TGGGCGCCGCCATGGAATCGCGCGAGCAAGCACCATATTTGTGGAGAATG
AGCAGGCTGGCGCGGGACCGGACGCCGAACCTGTCTCGCGAGACTAAATG
CTCAGACGTGAACAAGGACAGGGAAATGTTCATTTTCCCTATTCAGCTGA
CCACGAGCAGGATTGGCAATCTTACCCATTTGATCCATACTCTGCAATAT
GTAATGACCATACGTACATGCTCAAACATGTATATTTTGAGCTGGCGTCA
TAATCATGGATTCTAGTAGCCACATTTTGAAGGATCATCAGCGTCCAGAT
TTGCAGCCTTTGATTCCACCTAAACGTCTTGACATTTCTTCTCCTGACTG
GAGGATGCTCAGAAGGTATAGGCGCGTTCTTGTTTTTCTTTAAACACCGG
TACAGTACGTAATTGGCCTTGCTGGCGTTAAGCGAATCCCATTCGCTTTC
GCATATTATTTTCGCGCTTTCATCCTTCCTCGATATCACAGATCCAGCAG
TTGCAGGAGGAGAAAGCTGATCTGGAGCAGCAAGTGATGGAGCTGACCGC
TAAGTGCGAGAAGATCAAGCCGAGAGAAGAAGAAAGGTCGGTCATGATAC
CTCAAGCAATAAGCGATGTTTTCCTTGGCAAAACTACAAGAGCTATCGCA
ACAATCACATGCTGGGCAACAAACAGTTCAGGGATGTGGTGGAATCAACG
CCGCGAAAAACTTTATCCCCCTCCTCCCGCTGAGATCGTCTCTAGGAGGC
CATGCACATTATTAAACCGCTAGCCATTCCCCGTCCCTCCTATCCCAAAT
GCACCATTTTCACTCCACATCGGGACACCGGGATGGGATGCCTCCCGGGC
AACGACGACGCCAACAACATGTGCTTTCCGACACTCGTAACACTCCTCGG
AGCGCAGACGCGTAGCTGACGAGACCAAGCATAACGCGGAAGTCGACCAG
CTCAAGCGCACCAACGACCAGCTCAAGACGAAGCTCGAGCAAATGCTCTC
GGCCCCCAAGAAGTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig8:1384546..1388311+

>mRNA_F-serratus_M_contig8.19351.1 ID=mRNA_F-serratus_M_contig8.19351.1|Name=mRNA_F-serratus_M_contig8.19351.1|organism=Fucus serratus male|type=CDS|length=1602bp|location=Sequence derived from alignment at F-serratus_M_contig8:1384546..1388311+ (Fucus serratus male)
ATGATACCGCCCTACACCTCACTGGTGAAGTATAACAACCCGGTGCTCAT
AAGCACAAGAAACACCACCAGCACGAATCGTGACAGCAATAAGGGAGGGA
AGAAGAAAATAAAGGCTCCGGCCGTCGAGCGTCTCACCTCCCAGACAGAG
GATATCCTCAACTCCATTCTACCCCCAAGATGATACCGCCCTACACCTCA
CTGGTGAAGTATAACAACCCGGTGCTCATAAGCACAAGAAACACCACCAG
CACGAATCGTGACAGCAATAAGGGAGGGAAGAAGAAAATAAAGGCTCCGG
CCGTCGAGCGTCTCACCTCCCAGACAGAGGATATCCTCAACTCCATTCTA
CCCCCAAGGGAATGGACAGACGACGGACAGCTGTGGGTGCAATACGTCTC
GAGCACGCCGGCGACTCGCCTAGATGTTACCAATCTTCAGGAGCAGCTGG
ACCAGAAATTGCAGCAACGGCAGGCGAGGGAGACAGGAATCTGCCCGATC
AGGGAGGAGCTTTACTCCCAGTGCTTTGGGAATGGACAGACGACGGACAG
CTGTGGGTGCAATACGTCTCGAGCACGCCGGCGACTCGCCTAGATGTTAC
CAATCTTCAGGAGCAGCTGGACCAGAAATTGCAGCAACGGCAGGCGAGGG
AGACAGGAATCTGCCCGATCAGGGAGGAGCTTTACTCCCAGTGCTTTGTT
CGAATTTTCCGACGAAGGCGTAGTATCCGTCGCACCAAAATCAAAGTCGT
TCTTCGCTCGCTCCGGATTCGAATTTTCCGACGAAGGCGTAGTATCCGTC
GCACCAAAATCAAAGTCGTTCTTCGCTCGCTCCGGAATGAGCTGATCAGA
CAGGTCACGATCAACTGCGCAGAGCGAGGGCTGCTCCTGCTTCGCGTGAG
AGACGAAATCCACATGACCATTGCAGCGTACCAGACCATATACGAATCCA
GCATTGCCTTCGGCATACGCAAGACACTCGTCGCCGAGCAGCGGAAGGCA
GAGATGGCAGCCAAGATGAGCTGATCAGACAGGTCACGATCAACTGCGCA
GAGCGAGGGCTGCTCCTGCTTCGCGTGAGAGACGAAATCCACATGACCAT
TGCAGCGTACCAGACCATATACGAATCCAGCATTGCCTTCGGCATACGCA
AGACACTCGTCGCCGAGCAGCGGAAGGCAGAGATGGCAGCCAAGATCCAG
CAGTTGCAGGAGGAGAAAGCTGATCTGGAGCAGCAAGTGATGGAGCTGAC
CGCTAAGTGCGAGAAGATCAAGCCGAGAGAAGAAGAAAGATCCAGCAGTT
GCAGGAGGAGAAAGCTGATCTGGAGCAGCAAGTGATGGAGCTGACCGCTA
AGTGCGAGAAGATCAAGCCGAGAGAAGAAGAAAGACGCGTAGCTGACGAG
ACCAAGCATAACGCGGAAGTCGACCAGCTCAAGCGCACCAACGACCAGCT
CAAGACGAAGCTCGAGCAAATGCTCTCGGCCCCCAAGAAGTGAACGCGTA
GCTGACGAGACCAAGCATAACGCGGAAGTCGACCAGCTCAAGCGCACCAA
CGACCAGCTCAAGACGAAGCTCGAGCAAATGCTCTCGGCCCCCAAGAAGT
GA
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