mRNA_F-serratus_M_contig8.19345.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8.19345.1
Unique NamemRNA_F-serratus_M_contig8.19345.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A6H5JNW3_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNW3_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 4.220e-140
Identity = 213/289 (73.70%), Postives = 248/289 (85.81%), Query Frame = 3 
Query:  363 PSDWPGWVWLCIILWVLTTSYFLLFAVAMYLQELKSYAG--RVSFLKMLAFSLTWMYGSLFCSLLTVPDLLLGRRERAAERVHYYGCVMGKLMFRIVAARPIVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIYFSSKQRCKMIVHKPIHPGDPEFRDVATLRNHCFDVITGALPYAKAMLERQAKEK 1223
            PS WP W W+C+ +WVL + YFLLFAVAMYLQELKSY G  RVSF KMLAFSLTWM GSL CS L +PDLLLGRRERAAE+VHYYG +MG+LMFRI++  P+V GLENLPPDG+KGMVYVSNHQTS+DI++F YIGAERKFSWVSKSTVF +PGVGLLMKIA YVAL RG+++S+ KMF+DCK+ L +GWSVMIFPQGTRRRLKVLDFKDGAFQLAIDS S VVPFT+ LPE+++   +QR K+ VH+P+ PGDP F+DVATLR HCFD + GALPYA+ MLE Q K+K
Sbjct:   43 PSQWPRWAWVCLGVWVLLSCYFLLFAVAMYLQELKSYGGASRVSFPKMLAFSLTWMNGSLLCSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVKKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPVRPGDPAFKDVATLRKHCFDTVMGALPYAEGMLEDQRKQK 331
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: D8LS64_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS64_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 6.390e-89
Identity = 152/233 (65.24%), Postives = 182/233 (78.11%), Query Frame = 3 
Query:  621 MGKLMFRIVAARPIVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIYFSSKQRCKMIVHKPIHPGDPEFRDVATLRNHCFDVITGALPYAKAMLERQAKEKKAAEAAADTAEGAGETGTATETTVLLEDKKTK 1319
            MG+LMFRI++  P+V GLENLP DG+KGMVYVSNHQTS+DI++F YIGAERKFSWVSKSTVF +PGVGLLMKIA YVAL RG+++S+ KMF+DCK+ L +GWSVMIFPQGTRRRLKVLDFKDGAFQLAIDS S VVPFT+ LPE+++   +QR K+ VH+PI PGDP F+DVATLR HCFD +               K+K+AA AAA   EGAG       +T ++E KKTK
Sbjct:    1 MGQLMFRILSKPPVVIGLENLPSDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVKKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTV-------------MRKQKEAAAAAAMAGEGAG-------STPVIESKKTK 213
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A835YS94_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS94_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.760e-61
Identity = 119/232 (51.29%), Postives = 160/232 (68.97%), Query Frame = 3 
Query:  543 SLLTVPDLLLGRRERAAERVHYYGCVMGKLMFRIVAARPIVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDC-KQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIY-FSSKQRCKMIVHKPIHPGDPEFRDVATLRNHCFDVITGALPYAKAMLERQAKEKKAA 1232
            SL  +P LL+G+R+RA E  HY G V+ + + RI     ++ G+ENLPP  +   VYV+NHQ+++DI++F  I   R ++WVSK++VF +PGVGLLM++A YV+L+RG K S  KM EDC K  L+ GWSV+IFPQGTRRR K+LDFK GAF+LA +++  +VP TI LPE +Y    K R ++I+HKPI P DP F+D   L  H F  I GAL Y  AML+RQ  +  AA
Sbjct:    8 SLPAIPLLLIGQRKRARELTHYNGGVIARTLQRICFYPSVITGMENLPPP-ETACVYVANHQSTVDIAVFFAI--RRNYAWVSKASVFLVPGVGLLMRLAGYVSLQRGSKESGKKMMEDCRKDCLEKGWSVVIFPQGTRRRHKILDFKMGAFKLAQEARVPIVPVTIELPEKMYGIGCKDRPRLIIHKPIAPDDPLFQDRDALLAHTFGTIVGALSYGPAMLQRQRADAAAA 236
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A7S2UZR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZR3_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.390e-46
Identity = 116/290 (40.00%), Postives = 175/290 (60.34%), Query Frame = 3 
Query:  369 DWPGWVWLCI-ILWVLTTSYFLLFAVAMYLQELKSYAGRVSFLKMLAFSLTWMYGSLFCSLLTVPDLLLGRRERAAERV----HYYGCVMGKLMFRIVAARPIVEGLENLP--PDGDKG--------MVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSG-----------WSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIYFSSKQR----CKMIVHKPIHPGDPEFRDVATLR 1148
            +WP  + L + +++VL   + L++  A+YLQE+K+Y  +V  L+   F+L W+YGS +  +   P  +    +    +V    H    V+ + MFR     P V G+ENLP  P+ DKG        ++YV NHQ+ +DI++F ++  ER+F+WVSKSTVF +PGVG +M +A+Y+ L+RG   SI KMF  C++ L +            +SV IFPQGTRRR ++L FK GAFQLA+++   VVP T++LP DI+F+   R    CK+IVHKP+ P D  F+ +  +R
Sbjct:    2 EWPEVLGLVLGLIFVLFFIWALVYVFAIYLQEMKTYK-KVHVLRFSLFTLKWIYGSAYFVICLFPTWVSVGFQAFHPKVRALGHKKAGVLARWMFRSTFHEPEVVGMENLPAIPE-DKGRGKFEHDAVIYVVNHQSMIDIALFYFV--ERRFAWVSKSTVFTIPGVGWIMTMAQYIPLERGKGESIAKMFGLCRKSLGASPEGDNTKKADSFSVTIFPQGTRRRFELLPFKAGAFQLAMETGCRVVPITMYLPPDIWFNPSARGGDKCKLIVHKPMDPKD--FKTMEAMR 285
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A7S3Y3G5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3G5_HETAK)

HSP 1 Score: 174 bits (441), Expect = 4.390e-45
Identity = 91/223 (40.81%), Postives = 143/223 (64.13%), Query Frame = 3 
Query:  402 LWVLTTSYFLLFAVAMYLQELKSYAGRVSFLKMLAFSLTWMYGSLFCSLLTVPDLLLGRRERAAE---RVHYYGCVMGKLMFRIVAARPIVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIY 1061
            LWV   +Y       MY QE +SY G V F +   FSL  +YGS+ C +L +P ++  R  ++ +           + K +FR     P+V+GLENLP +GD+ +V+V NHQ+ +D+++  ++  +R+F++VSK+  F +PG G LM++  +V LKRG+K SI++MFE C Q ++S  +++IFPQGTR+R + + FKDGAF  A+D+  TVVP T+ LP D++
Sbjct:   51 LWVFFAAYM------MYRQERRSY-GEVGFARAFFFSLFCLYGSMICCVLVLPVIVFERGTKSVKVRNTAFQKNQQVSKKIFRFFFGDPVVQGLENLPQEGDRPVVFVMNHQSMVDVALSFFL--DRRFAFVSKAITFLLPGAGTLMRLCHFVPLKRGNKASILRMFEKCAQAMESDCNIVIFPQGTRKRHEWVPFKDGAFSFAVDNNYTVVPVTLALPADLW 264
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: W4G7D7_9STRA (PlsC domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7D7_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.040e-39
Identity = 97/253 (38.34%), Postives = 143/253 (56.52%), Query Frame = 3 
Query:  438 AVAMYLQELKSYAGRVSFLKMLAFSLTWMYGSLFCSLLTVPDLLLGRRERAAERVHYYGCVMGKLMFRIVAARPIVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIY-FSSKQRCKMIVHKPIHPGDPEFRDVATLRNHCFDVITGALPYAK 1193
            AV M   E K +   ++  K+L F L W+  S     L +P  L+          H    V+ + +  +     +VEG  N  PD  +  + V+NHQT MDI+   ++G    FSWVSKS +F +PG G LMK+A YV L R +K S+++MFE  +    +GWSV++FPQGTRRR + L FKDGAF LAI ++  V+P TI +P+D++ ++   + K+++ KPI   D   R+   L+   FDV+ G LP  K
Sbjct:   17 AVFMIYYEEKKHFANIAHGKILLFGLFWVLVSALQFALVLPLKLVLAPNELHIVAHETCQVVARSLHVLFFGPVVVEGRPNANPD--EVYMIVANHQTMMDITSLYFLGGN--FSWVSKSIIFLIPGAGWLMKLANYVPLTRKNKTSVLRMFELARDRFANGWSVVVFPQGTRRRTEFLPFKDGAFDLAIGAKVRVLPVTIIIPDDLWTWNRLGKVKLVIGKPIAIEDGMTRE--QLKQKAFDVVLGNLPKEK 263
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A024U0I6_9STRA (PlsC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0I6_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.160e-37
Identity = 89/234 (38.03%), Postives = 134/234 (57.26%), Query Frame = 3 
Query:  495 KMLAFSLTWMYGSLFCSLLTVPDLLLGRRERAAERVHYYGCVMGKLMFRIVAARPIVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIY-FSSKQRCKMIVHKPIHPGDPEFRDVATLRNHCFDVITGALPYAK 1193
            K+L F L W+  S    +L +P   +          H    V+ + +  +     +VEG  N+ PD  K  + V+NHQT MDI+   ++G    FSWVSKS +F +PG G LMK+A YV L R +K S+++MFE  K     GWSV++FPQGTRRR + L FKDGAF LA+D+   ++P TI +P+D++ ++   + K+++ KPI  G+    +   L+   +DV+   LP  K
Sbjct:   36 KILLFGLFWVIVSWIEFMLILPLKFVVAPNELHIVAHETCMVVARTLHVLFFGPVVVEGRMNVNPD--KVYMIVANHQTMMDITSLYFLGGN--FSWVSKSIIFLIPGAGWLMKLANYVPLTRKNKTSVLRMFELAKDRFAHGWSVVVFPQGTRRRTEFLPFKDGAFDLAVDANVEILPVTIIIPDDLWTWNRLGKVKLVIGKPIAVGNATKDE---LKQKAYDVVLSNLPKQK 262
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A485LJH2_9STRA (Aste57867_21395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJH2_9STRA)

HSP 1 Score: 147 bits (371), Expect = 8.320e-36
Identity = 78/179 (43.58%), Postives = 117/179 (65.36%), Query Frame = 3 
Query:  660 IVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIY-FSSKQRCKMIVHKPIHPGDPEFRDVATLRNHCFDVITGALPYAK 1193
            +VEG E++ P+  +  + V+NHQT MDI+   ++  +  FSWVSKS++F +PG G +MK+A YV L R  K+S++KMFE  K    +GWSV IFPQGTR+R + L FKDGAF LA+ +   V+P T+ +P+D++ ++   + K+IVHKP+  G  +    A L+    DVI  ++P  K
Sbjct:   91 VVEGKEHMNPN--EVYMIVANHQTMMDITALYHL--DGNFSWVSKSSIFLLPGAGWIMKLANYVPLTRKSKDSVLKMFEAAKDRFHNGWSVCIFPQGTRQRGEFLPFKDGAFDLAVTANVRVLPVTVIIPDDLWAWTRPGKVKLIVHKPLEKGLTK----AELKQQSHDVIAASMPKLK 261
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A7R9U941_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U941_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.360e-35
Identity = 86/230 (37.39%), Postives = 137/230 (59.57%), Query Frame = 3 
Query:  453 LQELKSYAGRVSFLKMLAFSLTWMYGSL-FCSLLTVPDLLLGRRERAAERVHYYGCVMGKLMFRIVAARPIVEGLENLPPDGDKGM----VYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIYFSSKQRCKMIV--HKPIHPGDP 1121
            LQE   +  R + LK++AF LTW   SL + ++L +  ++ GR        H     + KL+  +     ++EG E++P +  KG     +   NH + +D+ +   +  +  F+WV+KS+VF +PG+G L+ +A  V L RG K+S ++M E C++ LD GWSV+I+PQGTR R K L +K GAF+L+I+ Q  ++P +I LP+D +  +   CK+IV  H PIHP +P
Sbjct:   28 LQEKPQFLRR-NRLKIMAFGLTWQCLSLIYAAVLLLTSVIRGREWLRVAASHSAAEGISKLLCTVFFGEVVLEGTEHIPKNSMKGQAQPAIVAPNHSSMVDVLLCAMLPGD--FTWVAKSSVFILPGIGQLLWMAGTVPLVRGKKSSALQMLEGCRKALDDGWSVLIYPQGTRNRRKWLPWKYGAFKLSIEKQVPIIPVSIVLPDDTW--TNLECKLIVKVHPPIHPPEP 252
[Close]
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Match: A0A7S1XL16_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XL16_9STRA)

HSP 1 Score: 137 bits (346), Expect = 4.960e-32
Identity = 84/229 (36.68%), Postives = 126/229 (55.02%), Query Frame = 3 
Query:  456 QELKSYAGRVSFLKMLAFSLTWMYGSL-FCSLLTVPDLLLGRRERAAERVHYYGCVMGKLMFRIVAARPIVEGLENLPPDGDKGM----VYVSNHQTSMDISMFNYIGAERKFSWVSKSTVFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIYFSSKQRCKMIV--HKPIHPGDP 1121
            QE K +  R +  K+L F + W   ++ +   + V     G   R     H     + KLM  +     +VEGLE++P    KG     +   NH + +D+ +   +  +  F+WV+KSTVF +PGVG  + +A  V L RG K+S ++M E C++ LD GWSV+I+PQGTR RL    +K GAF+LAI+ Q  +VP +I LP+D + S    CK+I+  H P+ P  P
Sbjct:   27 QESKQFHKR-NVAKVLLFGVVWQIVAICYAFTIYVAGFFRGLEWRRVAASHCAAEGISKLMTALFFGEVVVEGLEHIPQGSIKGKCGPAIIAPNHSSMVDVLLCAMLAGD--FTWVAKSTVFLVPGVGQCLYLAGTVPLSRGKKSSAMQMLEGCRKALDDGWSVLIYPQGTRDRLSWRPWKYGAFKLAIEKQVPIVPVSIILPDDTWTSGS--CKLIIKAHPPVAPPKP 250
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNW3_9PHAE4.220e-14073.70PlsC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LS64_ECTSI6.390e-8965.241-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A835YS94_9STRA1.760e-6151.29PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2UZR3_9STRA1.390e-4640.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y3G5_HETAK4.390e-4540.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W4G7D7_9STRA4.040e-3938.34PlsC domain-containing protein n=5 Tax=Aphanomyces... [more]
A0A024U0I6_9STRA1.160e-3738.03PlsC domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A485LJH2_9STRA8.320e-3643.58Aste57867_21395 protein n=1 Tax=Aphanomyces stella... [more]
A0A7R9U941_9STRA1.360e-3537.39Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XL16_9STRA4.960e-3236.68Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:1231852..1238007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.5
Seed ortholog evalue3.7e-78
Seed eggNOG ortholog2880.D8LS64
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655,ko:K13509
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04072,ko04975,map00561,map00564,map01100,map01110,map04072,map04975
KEGG ModuleM00089
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010154,GO:0019637,GO:0022414,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090407,GO:1901576
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0204@1,KOG2848@2759
Ec32 ortholog description1-acyl-sn-glycerol-3-phosphate acyltransferase
Ec32 orthologEc-12_004670.1
EC2.3.1.51
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons3
Model size3865
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19345.1prot_F-serratus_M_contig8.19345.1Fucus serratus malepolypeptideF-serratus_M_contig8 1234395..1237657 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932382.3811088-UTR-F-serratus_M_contig8:1231851..12343941622932382.3811088-UTR-F-serratus_M_contig8:1231851..1234394Fucus serratus maleUTRF-serratus_M_contig8 1231852..1234394 -
1690964281.2117183-UTR-F-serratus_M_contig8:1231851..12343941690964281.2117183-UTR-F-serratus_M_contig8:1231851..1234394Fucus serratus maleUTRF-serratus_M_contig8 1231852..1234394 -
1622932382.4316065-UTR-F-serratus_M_contig8:1237657..12380071622932382.4316065-UTR-F-serratus_M_contig8:1237657..1238007Fucus serratus maleUTRF-serratus_M_contig8 1237658..1238007 -
1690964281.2760262-UTR-F-serratus_M_contig8:1237657..12380071690964281.2760262-UTR-F-serratus_M_contig8:1237657..1238007Fucus serratus maleUTRF-serratus_M_contig8 1237658..1238007 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932382.3952196-CDS-F-serratus_M_contig8:1234394..12345441622932382.3952196-CDS-F-serratus_M_contig8:1234394..1234544Fucus serratus maleCDSF-serratus_M_contig8 1234395..1234544 -
1690964281.230806-CDS-F-serratus_M_contig8:1234394..12345441690964281.230806-CDS-F-serratus_M_contig8:1234394..1234544Fucus serratus maleCDSF-serratus_M_contig8 1234395..1234544 -
1622932382.4069273-CDS-F-serratus_M_contig8:1234822..12349691622932382.4069273-CDS-F-serratus_M_contig8:1234822..1234969Fucus serratus maleCDSF-serratus_M_contig8 1234823..1234969 -
1690964281.2478895-CDS-F-serratus_M_contig8:1234822..12349691690964281.2478895-CDS-F-serratus_M_contig8:1234822..1234969Fucus serratus maleCDSF-serratus_M_contig8 1234823..1234969 -
1622932382.4203982-CDS-F-serratus_M_contig8:1236982..12376571622932382.4203982-CDS-F-serratus_M_contig8:1236982..1237657Fucus serratus maleCDSF-serratus_M_contig8 1236983..1237657 -
1690964281.2660592-CDS-F-serratus_M_contig8:1236982..12376571690964281.2660592-CDS-F-serratus_M_contig8:1236982..1237657Fucus serratus maleCDSF-serratus_M_contig8 1236983..1237657 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8.19345.1

>prot_F-serratus_M_contig8.19345.1 ID=prot_F-serratus_M_contig8.19345.1|Name=mRNA_F-serratus_M_contig8.19345.1|organism=Fucus serratus male|type=polypeptide|length=324bp
MATVPSDWPGWVWLCIILWVLTTSYFLLFAVAMYLQELKSYAGRVSFLKM
LAFSLTWMYGSLFCSLLTVPDLLLGRRERAAERVHYYGCVMGKLMFRIVA
ARPIVEGLENLPPDGDKGMVYVSNHQTSMDISMFNYIGAERKFSWVSKST
VFWMPGVGLLMKIARYVALKRGDKNSIIKMFEDCKQLLDSGWSVMIFPQG
TRRRLKVLDFKDGAFQLAIDSQSTVVPFTIHLPEDIYFSSKQRCKMIVHK
PIHPGDPEFRDVATLRNHCFDVITGALPYAKAMLERQAKEKKAAEAAADT
AEGAGETGTATETTVLLEDKKTK*
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mRNA from alignment at F-serratus_M_contig8:1231852..1238007-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8.19345.1 ID=mRNA_F-serratus_M_contig8.19345.1|Name=mRNA_F-serratus_M_contig8.19345.1|organism=Fucus serratus male|type=mRNA|length=6156bp|location=Sequence derived from alignment at F-serratus_M_contig8:1231852..1238007- (Fucus serratus male)
CTTAAACCAAGACTGACAACCTAAGGAAGCCGCTTCTGATGGAGACATAA
CGTAACCTTGCCCATCAAACCATCGTCATATTAAGGGTCGAGCGTAACCC
GAGACGAAAACTCGCGTGAAGTCTTTTCGGATTTTTCTCGCTCTCTCGAC
ATCAGATAAAACTCGAAAACCAGATCAACGTGGAGAACTCCTGACTCGCT
ATTCCTACTACTGTAACTGTGAGGGCCTGGCCACTTTTGACAGGCAGCGG
CTGCACGTTTTCGCGCGGAGGGGGCTCAAGCAAGCAACAAAGGTGGACGG
GGAGTGGTGCCTAGCGGATCGCCCACACGTGGAGCCGTCTCGTGGCAGCG
ATGGCGACAGTGCCGAGCGACTGGCCGGGATGGGTCTGGCTTTGCATCAT
CCTGTGGGTTCTCACTACAAGCTACTTCTTGCTCTTCGCTGTCGCCATGT
ACCTTCAGGAGCTCAAGTCCTACGCCGGGCGAGTGAGCTTCTTGAAGATG
CTAGCCTTTTCCCTGACCTGGATGTACGGAAGCCTGTTCTGCTCCCTGCT
GACCGTGCCCGATCTCTTACTCGGCCGCAGAGAACGGGCGGCCGAGCGAG
TGCACTACTACGGTTGCGTCATGGGGAAATTAATGTTCCGCATCGTGGCT
GCGCGGCCCATCGTGGAGGGCCTGGAGAACCTCCCCCCCGATGGTGACAA
GGGTATGGTATACGTGTCGAACCACCAGACCTCGATGGACATTTCTATGT
TCAACTACATTGGTGCCGAGCGGAAGTTTTCGTGGGTTTCGAAGAGCACG
GTCTTTTGGATGCCCGGGGTAGGCTTACTCATGAAGATCGCGAGATACGT
GGCACTCAAGCGGGGCGACAAGAACAGCATCATCAAAATGTTTGAAGACT
GCAAGCAGCTCCTCGACTCCGGCTGGTCGGTTATGATTTTCCCCCAAGGC
ACGCGCCGCCGCCTGAAGGTCCTGGACTTCAAAGATGGAGCGTTCCAGCT
CGCCATCGACAGCCAAAGCACCGTCGTGAGTGTTCCCTTGTATAAGCGAT
ACGATTCGTAATTTTGTAATGCTATTGTTAGTACCAGGTAGCAAGGACGA
GGAAACGTTTCTCAATTATTCCAAGAACGGTGTATATAATGCTGTTTGGA
CGACCGTGGCAACTTGTGTTGGTTGATGAAAGAGTGTGTTCATTAAAAAA
TCTGAACGCACCCAGACAAACCATCCGAGGATCCGCATCATCAGCCTCGT
GACAAGTACCTACGATACAGCACCTTGATTCGGCAGCGCTGTGTTTAAGT
ACGTACTGGTACGATACAACAGTATCTTGATTCTTAAGTGTTTTAAGCAC
TTACGATACAGCATCTTGAATCTGCAGTTAAGTACGTACGATACGATATC
TTGATTCTGCAGCGCCGTGTTTAAGTACGTACGATACAGCATCTTGAATC
TGCGGCGCTGTCGGTGAGTTATGCCAACCATCCCTCCATCCAGTTTACTA
TCTCTACTTGGCTACGGTGGGAAATTATATGGAGTGTGCTTCTGTCGTCC
CTCTGCGGTGGGTTATCCTGGAATGCGAGCTCGGAAGACTTTTACAGTAC
TACGAGAGGAGAAAAATGTTCAACGTGCGTTGGAAACGACCATCCACCAC
TACTGCCGTTGTTGAACATTGAAGGAAGATCGGAACTTTTCCGCATCCTC
TCCAGCGGTACTGTACATAAAGTACACATCAAGTGCGCCTATCTGAGCCG
TAATCTGAGAGGTGTTTGAAGAAAATACAGTGCAGGAGGAGTGCGTACCA
CCCCTCTCCCCTTCCTATGACAAACATCCAATAACGTTCTTGGAATCCCA
ACATCTTATATGGTGAAATACATGTTCAGTTTTTGGCACTAATCCCGTAC
GTAAAGATATTTTTGTAAGGACCGACCAGTCACAGACCTCCCTGGCAGGA
AAGTACTGTCAGATTCGACCAATGAAAGACGATTTTTGTAAGGATTTTGT
AAGGACGGGACGAGGTGATTGGCGGGCGCGGTGCATTTCACACAGTACCG
TGAGATTATCGCGTCAGCAGCCACCCAGATTCTGTAGATTGCTCTGTTAC
AGGTCTTCCATCGGTGGAGCCCTTTCACTTGAAAATATATAGGCAGCTCA
CACACACGAACGCGCCGGCGGCAGCATCGATGTACCATGTTGATGTGGCG
GTACATCCCCACCATAGTGTGAGAGGGGGCAACGCCCCCCGTGCAATGTA
CCTGTTGAAGAGGACCGACATAACGCCTGTAGGACAAGAAAAAATAGGGA
CGGGGGAAGACGGGCGTGGTCTCGGTGTGATTGTGAAAAGTGCGCTGCAC
CATGACCCCTGTGATCGTTTGGTGTCCCGGGCAGCTGTCAAGTCGTAGGG
TGTTGTGGTGATTCAGGCCTGTTTTTCCCAGCAAGTGCTCGTAGCTGCAA
GTTGGACGAGTAGAGATCTTCGCGTATAAAACATCTGTTTTCCAACGCCA
TACAACGTTCGTTCGGCTGCTGCCGAAATACTCCGCGTCCCTCATTTTTT
TTGCCGTGGTACCAGCAGAACGAACGTCCTCTGAAACTGAATTCTAAGGG
GAAGCTTACGTCGCTCGTTATATTCTCAAGGACTTCAATGCAAAAAATCG
TGATGTAATCCAGCATTTATCTTGAAGAGCAAGGCCAGTTGGTAACACCT
AAAAACATTTGCAAAACGCAATATGTACCTCTCTCTCGGTTTTACAAAAA
AGTGCTTTCTTCAAATTTTGTTTGCGCTTCGCGCGAATAGTTTAATTATT
TTCAAAACATCTCTATGTATGAGATCTGAGCCCATTTTTTTTGTGTCACG
AAAGAAAGTCTTGTTACTTATAATTACAGTGTATCTGGTAGTGTACAATT
ATTTTTTTAGCATCTTTGCTCGAATGCGCCTCCGTAAAGATTTGTCCCAA
GATCTTTTCCTGCCTCTACTGCCTAGAATTGGAAACATGCAAATGAACGC
TGCCACGTGGTTTTGGCAATCGATGACACTACGTGCAGGTCCCCTTTACG
ATACACCTTCCGGAAGACATTTACTTCAGCTCGAAGCAACGGTGCAAGAT
GATCGTCCACAAGCCCATTCACCCAGGAGATCCAGAGTTCCGGGACGTGG
CAACGCTGCGCAACCACTGTTTCGACGTCATAACGGTGAGCACTGAAAGC
ACGTGGGATGCTTCCGGACCGAAATCACGATATTAGACAGCTGACGACGA
GATGAGTCCCGCCAGTTGCTTCAGCGGGGGTGCCATCCAGTGGTCCATGC
TGAGGCGGTGATGTACAAAGAAAAATGCCGACTGTGTGGTACTGCCTGCG
TTACACTCGATACGGTGTAATCATGCCATAAAATATACCCCGTCGTTTGT
CCACCGGCGACGGTCTCACTCTCTCCGTGCCATCCTCTATGTGTTAAATA
CCGTCTTCCATAGGGGGCTCTTCCGTACGCGAAGGCGATGCTTGAACGGC
AAGCAAAAGAAAAGAAAGCGGCAGAAGCAGCGGCGGATACCGCCGAGGGA
GCAGGGGAGACAGGAACGGCGACGGAAACAACCGTGCTACTAGAGGACAA
GAAAACCAAGTAAATCGGACGACCGGAAAGCATCTGGACCGGGCGTCCAA
CGTTTTTGAGGGGGGTACTCGGGGGACCGGAGTGAACGAGGTCAGGAGCA
CCAAAGACTCGAATGTGTCGTTATCGCGGGAGCCAGTCGTTTAACCATAC
GTCGCCATGGAAGACATGCTAGATGTATTGCCGTGGCAACGCGTGATTCG
CCGCTGTGCGGTTGGTGAACAGGAGGAGTGCTCGTCCCGGTGTGAACACG
ATCTATCTGCGCTGTCTGCTGTGTGCCTGTGGTCGTTGCGTGACGACGAG
GATACGCGCGAGACTCAGAATAAGGTGGGCAAGGCCACTGGCTGCCTCGG
ATGGCTTTATCGAGAAACAATTCCGCATTCTCTTGATGGCTGTATCGCAT
ATTCGCGTTGAGTCGATCAGGACAAACACGAGACAAGTTTGTGGCGCGCG
GGGACGACTGCCATCCTTCGCTTCTGCCCTGTCGGCAGCGGGATTGGAAT
GGCACCAGTCTCCTAGCACCTTGACCTCAGGCAGAGGGTGTAATTTTGGA
AGGCCGTGGGTGCAGAGTACAATGGGTGGAACCGGATGGGTTGAGTCGCG
GAGTCATGCTTTCGTTACTTGTGAAAAGGCGGCTGAAAGTAGGCAGAAGA
TAATTTTTCGTGAATGTGCAAGGACGACGATGTTCTCGAGGTTGGTGATT
AATAGATTGTCTCACCCTGATGTAGAGGGTGTGTCGTAGCGGTTGTCCGT
GTTGTGTAGAGAGGATGTGCCCAAGCGAGATTATTTGAGTTTCGTGTCTT
GGAATCTAGAGGCCTTCCTACCAGTTATCGGACGGTATGTCGAGGTCAGA
CTCTCATCCCTTTTGCTTCTGTTGTTCCGTCGCGGAGAGCTCGAGCAGTA
CTTTTCACACTTGGATCGATTTGACATGAACTCTGTGTGTGAGTTAATTG
CTTTTTGTGTGTTTGCTGTCTCTTTCTGAGCCTTACAACTTCTGGATTTT
CGCTTTAACTCGTTTTCTGCGAGAGAAAACTGCGCTTTTTGTGTATGTGT
GTGTGTTATTTATTTCCCCAGAAACATTGCCTGCTTGATTTTTGTATAGT
ACCGGTAGCGCCACTCGTTTGACATCCCCCCGGCCTTCTGTCGTGGCAGG
CGTGATCATAACGGGATCTGGGTCGTTTATGAATATACATGGGGGGGGGG
GAAGTAGCGCCGTGTGGCACGCACACAATCGTTGATTTTTGGGGCGAGCC
GCGTGTCAAAATGACGGGCAAAAAAAATGACCCGTTTGCACTCACTTGCG
TATGTTGCACAATTTAACGTGCACCGTCGTACGCCCAGGTACGGGCTATT
TTAGTCGGTGGAAGGATGGAAAAGTGGGACACCGCGAAGTCGAGGTGCAT
GAGGGCCTAATGCTTTCGGCGGTGTGATGCCCTACAAATCTCCGAGGGAA
CTGGATTAATTATCGAGCCGCTTTTCACGAGGTTTTGTTTCGTAGCTCCG
AGTCCATCTCCTCAAACTACTCCGCTAGTCTGATTTGATATATCCCCGTT
CGAGAACGCTCGCATGTCCCCGCCTGGTGATGAGGGTACTCGGCGCTGCA
AATTGGGATCGCTACATATAGAGTTTTCACACACATCTAAGGCGTTTTTG
TCTGATAAGCAAGAGCGAACGTGCGCCTCGCCGTGTATTTCCTCCCCCCC
CCCTCCTGTTTGTAGGTAATATTGTATCTATTTTTTTTTGTTAAGAAATA
CTCAAAAAAGAAGCGTTGACAAAATGAGGGCTTACTTACTACATTGTATC
TATTTTTTTTTGTTAAGAAATCCTCAAAAAAGTAGCGTTGGCAAAATGAG
GGCTTCCTTACTACATGGTGCACAGCTTCGTGTTTTAAGGTTTTATGACT
ATTAGTAATTAATAAAGAGCTTTGGGGTAGGACTGCGCTAGGCTATTATT
GAGAGGCGACGGACCACCCGGGAGGGTATTATTTGCTCGCTTGTCAGCGA
CGAAGACGCAGTCTTGACCTTTTGCAGCGGTCGGCGTAGGGCGCAGGCGG
TATTGATGTTGGATTCGTGACGCCCGAAAATAGGTGTTCAGCAGTGCTAC
CACCGTTTCCACCCCCGTCAAGCAGGTGAATGACCACCAATAGTCCATCT
CTTTTTGGCTGTGCCCATCTCTTGGAGAACTCAAGTTATGAATAGCTTTT
GCCGCTAGTAAAGTGCATGCAAACCGCCTGATGACTTCTACATTTTTTAT
TGATGTTGAATGGTACAGTTATTATCTGATACCACGAGTTTGAGTTGAGG
GTACAGTACTGTATTACGTACTACGTGCTGGGTTCCCGGGGTACGATTGA
AACCGGCCAGGTACTATTCTATATATAGGGTACATAATACTAGTAAGTAA
TAAAAGCAAGATGGAGAAACGAAGAATATCCAAACAGCAGTACCCGCCCC
GTCCGCCGTTGTGCCGGCCATAGCATATATATCTGTTCCAAACAGTATTT
CCAGCAGTATTTGGTACGTCATCGCCCGTTGGGAAACGTGCGACCCACCT
CAGCTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig8:1231852..1238007-

>mRNA_F-serratus_M_contig8.19345.1 ID=mRNA_F-serratus_M_contig8.19345.1|Name=mRNA_F-serratus_M_contig8.19345.1|organism=Fucus serratus male|type=CDS|length=1944bp|location=Sequence derived from alignment at F-serratus_M_contig8:1231852..1238007- (Fucus serratus male)
ATGGCGACAGTGCCGAGCGACTGGCCGGGATGGGTCTGGCTTTGCATCAT
CCTGTGGGTTCTCACTACAAGCTACTTCTTGCTCTTCGCTGTCGCCATGT
ACCTTCAGGAGCTCAAGTCCTACGCCGGGCGAGTGAGCTTCTTGAAGATG
CTAGCCTTTTCCCTGACCTGGATGTACGGAAGCCTGTTCTGCTCCCTGCT
GACCGTGCCCGATCTCTTACTCGGCCGCAGAGAACGGGCGGCCGAGCGAG
TGCACTACTACGGTTGCGTCATGGGGAAATTAATGTTCCGCATCGTGGCT
GCGCGGCCCATCGTGGAGGGCCTGGAGAACCTCCCCCCCGATGGTGACAA
GGGTATGGTATACGTGTCGAACCACCAGACCTCGATGGACATTTCTATGT
TCAACTACATTGGTGCCGAGCGGAAGTTTTCGTGGGTTTCGAAGAGCACG
GTCTTTTGGATGCCCGGGGTAGGCTTACTCATGAAGATCGCGAGATACGT
GGCACTCAAGCGGGGCGACAAGAACAGCATCATCAAAATGTTTGAAGACT
GCAAGCAGCTCCTCGACTCCGGCTGGTCGGTTATGATTTTCCCCCAAGGC
ACGCGCCGCCGCCTGAAGGTCCTGGACTTCAAAGATGGAGCGTTCCAGCT
CGCCATCGACAGCCAAAGCACCGTCATGGCGACAGTGCCGAGCGACTGGC
CGGGATGGGTCTGGCTTTGCATCATCCTGTGGGTTCTCACTACAAGCTAC
TTCTTGCTCTTCGCTGTCGCCATGTACCTTCAGGAGCTCAAGTCCTACGC
CGGGCGAGTGAGCTTCTTGAAGATGCTAGCCTTTTCCCTGACCTGGATGT
ACGGAAGCCTGTTCTGCTCCCTGCTGACCGTGCCCGATCTCTTACTCGGC
CGCAGAGAACGGGCGGCCGAGCGAGTGCACTACTACGGTTGCGTCATGGG
GAAATTAATGTTCCGCATCGTGGCTGCGCGGCCCATCGTGGAGGGCCTGG
AGAACCTCCCCCCCGATGGTGACAAGGGTATGGTATACGTGTCGAACCAC
CAGACCTCGATGGACATTTCTATGTTCAACTACATTGGTGCCGAGCGGAA
GTTTTCGTGGGTTTCGAAGAGCACGGTCTTTTGGATGCCCGGGGTAGGCT
TACTCATGAAGATCGCGAGATACGTGGCACTCAAGCGGGGCGACAAGAAC
AGCATCATCAAAATGTTTGAAGACTGCAAGCAGCTCCTCGACTCCGGCTG
GTCGGTTATGATTTTCCCCCAAGGCACGCGCCGCCGCCTGAAGGTCCTGG
ACTTCAAAGATGGAGCGTTCCAGCTCGCCATCGACAGCCAAAGCACCGTC
GTCCCCTTTACGATACACCTTCCGGAAGACATTTACTTCAGCTCGAAGCA
ACGGTGCAAGATGATCGTCCACAAGCCCATTCACCCAGGAGATCCAGAGT
TCCGGGACGTGGCAACGCTGCGCAACCACTGTTTCGACGTCATAACGGTC
CCCTTTACGATACACCTTCCGGAAGACATTTACTTCAGCTCGAAGCAACG
GTGCAAGATGATCGTCCACAAGCCCATTCACCCAGGAGATCCAGAGTTCC
GGGACGTGGCAACGCTGCGCAACCACTGTTTCGACGTCATAACGGGGGCT
CTTCCGTACGCGAAGGCGATGCTTGAACGGCAAGCAAAAGAAAAGAAAGC
GGCAGAAGCAGCGGCGGATACCGCCGAGGGAGCAGGGGAGACAGGAACGG
CGACGGAAACAACCGTGCTACTAGAGGACAAGAAAACCAAGTAAGGGGCT
CTTCCGTACGCGAAGGCGATGCTTGAACGGCAAGCAAAAGAAAAGAAAGC
GGCAGAAGCAGCGGCGGATACCGCCGAGGGAGCAGGGGAGACAGGAACGG
CGACGGAAACAACCGTGCTACTAGAGGACAAGAAAACCAAGTAA
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