mRNA_F-serratus_M_contig8.19341.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: D8LS61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS61_ECTSI) HSP 1 Score: 393 bits (1010), Expect = 3.900e-134 Identity = 216/335 (64.48%), Postives = 243/335 (72.54%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVEKG-IKGMSAFQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSGEGGRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFN--LPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRKVPTNASPPPEGTPCYSLQPSATRYT 997
Y YG+T FMGVRALLYPPF++KT++QV +G SAFQVAR TVR EGVRGLYKGF ISST+LVFRQ YFTTYEVVR LGP S+LY LGPE GE+VRNM+AGAASS + Q FTVP+DII Q VY ESGLRGFYRGFG+SVLQFAPTSAIWW AYG+YS+ F+RAL N +P T +QR++G QAAAG CTGMTTV+LTNPLDVLRTRLQVEGRRGD RT+ SEYR L+AESGP GLM+GL PR++AMAPASVLI+SVYELIKRLSRK P PPP GTP QP AT T
Sbjct: 21 YSYGITFFMGVRALLYPPFLLKTKIQVARGGASEKSAFQVARATVREEGVRGLYKGFWISSTSLVFRQVYFTTYEVVRHHLGPGSDLYQRLGPEKGELVRNMSAGAASSAVMQCFTVPLDIIGQ---------------------------------------VYGESGLRGFYRGFGISVLQFAPTSAIWWAAYGVYSRAFVRALGNLPEPVPELTAQQRQVGGQAAAGFCTGMTTVLLTNPLDVLRTRLQVEGRRGDDRTIASEYRILMAESGPRGLMKGLGPRILAMAPASVLIVSVYELIKRLSRKTPL--PPPPAGTPQLPSQPPATART 314
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: A0A6H5JPC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC8_9PHAE) HSP 1 Score: 254 bits (648), Expect = 9.990e-80 Identity = 129/184 (70.11%), Postives = 153/184 (83.15%), Query Frame = 2
Query: 452 GRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFN--LPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRKVPTNASPPPEGTPCYSLQPSATRYT 997
G ++A++VAR+VY ESGLRGFYRGFG+SVLQFAPTSAIWW AYG+YS+ F+RAL N +P T +QR++G QAAAG CTGMTTV+LTNPLDVLRTRLQVEGRRGD RT++SEYR L+AESGP GLM+GL PR++A+APASVLI+SVYELIKRLSRK P +PPP TP + QP AT T
Sbjct: 104 GHSVTAREVARQVYGESGLRGFYRGFGISVLQFAPTSAIWWAAYGVYSRAFVRALGNLPEPVPKLTAQQRQVGGQAAAGFCTGMTTVLLTNPLDVLRTRLQVEGRRGDDRTIVSEYRILMAESGPRGLMKGLGPRILAVAPASVLIVSVYELIKRLSRKTPL--APPPAETPHFPSQPPATART 285
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: A0A7S2V638_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V638_9STRA) HSP 1 Score: 253 bits (645), Expect = 1.110e-78 Identity = 146/312 (46.79%), Postives = 191/312 (61.22%), Query Frame = 2
Query: 8 YGLTLFMGVRALLYPPFVVKTRMQVEKGIKGMSAF----QVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSGEGGRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFNLPAFTGEQRKIG-AQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGD--KRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRK 922
YG TLFMGVR +LYPPFV+KTR+Q + + SA+ + VR+EG+RGLYKGF ISS L FRQ YF +EV+R KLGP S LY LGP GE+ RN+ +GA S Q FT+PVD++SQ + G G+ A +AR++Y + G+RGFY+G G S++QFAPTSAIWWT Y R + P F+ + +QA AG G V+LTNPLDV+RTRLQV G RT ++E++ L+A G L +GLVPR++A+APASV+I+SVYE IKR+S K
Sbjct: 51 YGTTLFMGVRFVLYPPFVIKTRLQTQ-ALGNSSAYTGTAHAFKSIVRTEGIRGLYKGFWISSINLAFRQVYFAVFEVLRAKLGPGSALYQVLGPTGGELARNLISGAGCSAAFQVFTIPVDVVSQRMMVA-----------------GKGDANMRPKASVLARQIYEKHGIRGFYKGVGASLMQFAPTSAIWWTTYHAVELHVERV----SRPLFSNKDNAARVSQAIAGFTGGTVAVLLTNPLDVIRTRLQVLGTENSTANRTFVTEFQHLLATEGAKSLTKGLVPRLIAVAPASVIIISVYEFIKRVSVK 340
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: A0A835YRA5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA5_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.410e-77 Identity = 161/333 (48.35%), Postives = 204/333 (61.26%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVEKGIKGMSAFQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESE--LYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQAT-VAGAGGGGETGAEGTSARQRGSGEGGRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYS---------------KVFIRALANFNLPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVE-GRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRKVPTNASP 943
Y T F+G+R LL+P VVKTRMQ + + V R V+ EG+RG+YKGFG++S +L+ RQ YFT YE++R+ LGPES LY +G + GE+VRNM AGA +SV Q TVP+D++SQ VAG GG EGG +A +AREVY G+RGFYRGF +V+QFAPTSA WW+AYGLY K + A + + E R+I QA AG G TTVVLTNPLDV+RTRLQV G T+LSE RAL A +G LM+GL PRM+++APASVL+++ YE IKR+SRK P A P
Sbjct: 35 YTLAFTSFLGLRVLLHPTLVVKTRMQATGEVYSGTVAAV-RHIVKQEGMRGVYKGFGVASLSLLPRQAYFTIYELLRRYLGPESSPSLYMSMGAQQGEVVRNMVAGAGASVAMQVATVPIDVVSQRLMVAGIAGG----------------EGGPTTAAA-IAREVYATGGVRGFYRGFAAAVMQFAPTSAAWWSAYGLYKXXXXXXXXXXXXXXXKEPLAARIDALPLNLSEEARQILVQATAGYLAGATTVVLTNPLDVIRTRLQVRRGAAAAGATMLSEARALWAAAGARALMKGLGPRMISVAPASVLVVTTYEYIKRVSRK-PAEAVP 348
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: A0A7S4NRY9_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NRY9_GUITH) HSP 1 Score: 201 bits (510), Expect = 1.120e-58 Identity = 122/318 (38.36%), Postives = 179/318 (56.29%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVEKGIKGMSA-----------FQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSGEGGRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFNLPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRK 922
Y YG +L + VR LYP VVKTR+Q++K ++A + +R EGVRGL+KGFG+S+ +V Q Y TTYE VR L +E ++ P+ +VRN AG +S+++Q VP+DI+SQ + G G G S V++E+ R+ G++GFY+GFG S+ +AP+SAIWW +YG + L + +P T K +A+AG G+ V TNP+DV RTRLQVEG D L + R L + GP L++G+ R+MA P+S++I++VYEL+KRLS++
Sbjct: 20 YFYGPSLSLLVRFCLYPLSVVKTRLQMQKDPYSIAASAPSVNHYSGTLDAFHKIIRHEGVRGLFKGFGVSTVGIVSGQLYITTYEYVRHHLMHMNERNRFISPKRMNVVRNAVAGGCASLVSQTIVVPIDIVSQKQMMNFGTGDSNG------------------SLVHVSKEILRQDGVKGFYKGFGASLCVYAPSSAIWWGSYGYLRE----RLQSHFMP--TSHASKRLTEASAGASAGLVAAVATNPIDVARTRLQVEGHPRDGSNLRTTLRHLWCQEGPKSLLKGVQARIMASVPSSIMIVTVYELVKRLSKR 313
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: UPI001CF3F204 (LOW QUALITY PROTEIN: solute carrier family 25 member 44-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3F204) HSP 1 Score: 195 bits (496), Expect = 8.570e-57 Identity = 124/309 (40.13%), Postives = 174/309 (56.31%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVE-KGIKGMSAFQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSG-EGGRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFNLPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRK 922
Y +G TLF G+RALLYP +VKTR+QV+ K +F + +R EG+RGLYKGF +SS L+ QFY TT E+V+ + + VR AG +S+++Q TVPVD+ISQ + +G G G+L A + RE+ R G RG YRG+ +S++ +APTSAIWW YG Y++ F+ +L P + A AG G TT +TNPLD++RTRLQV G G ++ +R L+ E GP GL +GL RM++M P+SV+++ YE +KRLS K
Sbjct: 19 YFFGPTLFFGIRALLYPANLVKTRLQVQRKNALYKGSFDAFVKVLRYEGIRGLYKGFLVSSFGLLSGQFYITTLEMVKMRT-----------KKYNLAVRGFLAGGIASIVSQTITVPVDVISQKLMV-----------------QGQGVNSGKLKGASTIVREIVRCDGPRGLYRGYLISLMTYAPTSAIWWFTYGAYTR-FVGSLVVSGTP-------HLFVLAVAGALAGFTTSTITNPLDIMRTRLQVGG--GKSTVVIHMFRTLLQEEGPTGLTKGLSARMLSMVPSSVIMVLGYETVKRLSLK 289
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: A0A2B4RT67_STYPI (Solute carrier family 25 member 44 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RT67_STYPI) HSP 1 Score: 187 bits (476), Expect = 8.260e-54 Identity = 122/309 (39.48%), Postives = 174/309 (56.31%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVE-KGIKGMSAFQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSGEG-GRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFNLPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRK 922
Y +G T F+G+RALLYP +VKTR+QV+ K +F + +R EGVRGLYKGF +SS L+ QFY TT E++R + E VR + AG +S++ Q TVPVD+ISQ + +G GE +L A + RE+ + G G YRG+ +S++ +AP+SAIWW+ YGLY+ + + N + TG + A AG G TT LTNPLD++RTRLQV G G + + +L+ E GP GL +GL R++AM P+S++++ YE +KRLS K
Sbjct: 19 YLFGPTFFLGIRALLYPANLVKTRLQVQRKKALYNGSFDAFVKVIRFEGVRGLYKGFMVSSFGLLSGQFYITTLELIRART-----------KEYNNAVRGLLAGGCASLVGQTITVPVDVISQKLMV-----------------QGQGENTAKLKGASTIIREIIQSDGPLGLYRGYLISLMTYAPSSAIWWSTYGLYTGL----VGNIVI---TGTPHML-VLAMAGTMAGFTTATLTNPLDIMRTRLQVGG--GRSALVFQMFGSLLKEEGPKGLTKGLSARILAMVPSSLVMVLGYETVKRLSLK 289
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: UPI0009E48ABE (solute carrier family 25 member 44-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E48ABE) HSP 1 Score: 185 bits (470), Expect = 4.180e-52 Identity = 118/309 (38.19%), Postives = 176/309 (56.96%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVE-KGIKGMSAFQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSGEG-GRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFNLPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLSRK 922
Y +G TLF+G+RALLYP +VKTR+QV+ K +F + +R EG+RGLYKGF +SS L+ Q Y TT E++R + + VR AG +S++ Q TVPVD++SQ + +G GE +L A + RE+ + +G G YRG+ +S++ +AP+SAIWW++YG+Y+ + + N L +G + A AG G+TT TNPLD++RTRLQV G G +L +R L+ E GP GL +GL R+++M P+S++++ YE +KRLS K
Sbjct: 90 YFFGPTLFLGIRALLYPANLVKTRLQVQRKNALYKGSFDAFVKVIRFEGLRGLYKGFLVSSFGLLSGQCYITTLELIRTRT-----------KDYNNAVRGFLAGGCASLVGQTITVPVDVVSQKMMV-----------------QGQGENTAKLKGASTIIREIVKSNGPLGLYRGYLISLMTYAPSSAIWWSSYGMYTGL----VGNIVL---SGTPHML-VLAIAGSMAGLTTATTTNPLDIMRTRLQVGG--GKSTFVLQMFRTLLKEEGPKGLTKGLSARILSMVPSSIVMVLGYETVKRLSLK 360
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: A0A6S7IW13_PARCT (Solute carrier family 25 member 44-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IW13_PARCT) HSP 1 Score: 181 bits (458), Expect = 3.360e-51 Identity = 120/309 (38.83%), Postives = 172/309 (55.66%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVEKG---IKG-MSAFQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSGEGGRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFNLPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESGPGGLMRGLVPRMMAMAPASVLILSVYELIKRLS 916
Y +G TLF G+RALLYPP ++KTR+QV+K KG + AF R V+ EG+RGLYKGF +S+ +++ Q Y TTYE+VRQK +R AG+ +S++ Q TVPVDIISQ + +G A+ ++ A + RE+++ G +GFY+G+ +S++ + PTS +WW AYG Y + + + P I Q G G+T TNPLDVLRTRLQVEG ++++ ++ LI E G GL +GL R+ M P+S+LI YE IK+LS
Sbjct: 19 YIFGPTLFCGIRALLYPPNLIKTRLQVQKKRAMYKGTIDAF---RNIVKLEGIRGLYKGFLVSNFSVLSGQLYITTYELVRQKTS-----------RYNLALRGFFAGSCASIIGQTVTVPVDIISQKLMVQG--------QGQCAKNY------KVKGAGMIIREIWQHQGPKGFYKGYAISLMTYGPTSGVWWAAYGSYLGIVGNLVPDGTAP--------IVVQGICGPIAGLTAGTATNPLDVLRTRLQVEGGN----SVVAVFKELIREEGIMGLSKGLSARIATMMPSSLLITLGYETIKKLS 287
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Match: UPI00106B02A4 (solute carrier family 25 member 44-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B02A4) HSP 1 Score: 178 bits (451), Expect = 4.010e-50 Identity = 118/307 (38.44%), Postives = 170/307 (55.37%), Query Frame = 2
Query: 2 YGYGLTLFMGVRALLYPPFVVKTRMQVE-KGIKGMSAFQVARETVRSEGVRGLYKGFGISSTTLVFRQFYFTTYEVVRQKLGPESELYAYLGPETGEMVRNMTAGAASSVMTQFFTVPVDIISQATVAGAGGGGETGAEGTSARQRGSGEGGRLISAQDVAREVYRESGLRGFYRGFGVSVLQFAPTSAIWWTAYGLYSKVFIRALANFNLPAFTGEQRKIGAQAAAGLCTGMTTVVLTNPLDVLRTRLQVEGRRGDKRTLLSEYRALIAESG-PGGLMRGLVPRMMAMAPASVLILSVYELIKRLS 916
Y +G TLF G+RA+LYPP ++KTR+QV+ K F R V+ EG+RGLYKG+ +S+ +L+ Q Y TTYE++RQK ++ A +R AGA +S++ Q VPVDIISQ + G ++ + +G+G V ++++ G+RGFYRG+G+S++ +APTS +WW +YG Y + + N P I Q AG G+T NPLDVLRTRLQV G ++++ + L+ E G GL +GL R+ M P+S LI YE IKRLS
Sbjct: 19 YVFGPTLFFGIRAVLYPPNLIKTRLQVQRKRSMYKGTFDAFRNIVKQEGIRGLYKGYLVSNFSLLSGQCYITTYELLRQKTSYYTDNLA---------LRGFFAGACASIVGQTIMVPVDIISQFLMVQG-----QGQCSSTYKPKGAGM---------VVKQIWENQGIRGFYRGYGISLMTYAPTSGVWWASYGQYLGIVGSLVPNGTAP--------IVVQGIAGPLAGLTAATAVNPLDVLRTRLQVGGGS----SVVAVLKDLLREEGFIMGLSKGLTARITTMMPSSFLITLGYETIKRLS 290 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19341.1 >prot_F-serratus_M_contig8.19341.1 ID=prot_F-serratus_M_contig8.19341.1|Name=mRNA_F-serratus_M_contig8.19341.1|organism=Fucus serratus male|type=polypeptide|length=324bp MGVRALLYPPFVVKTRMQVEKGIKGMSAFQVARETVRSEGVRGLYKGFGIback to top mRNA from alignment at F-serratus_M_contig8:1146278..1150804- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19341.1 ID=mRNA_F-serratus_M_contig8.19341.1|Name=mRNA_F-serratus_M_contig8.19341.1|organism=Fucus serratus male|type=mRNA|length=4527bp|location=Sequence derived from alignment at F-serratus_M_contig8:1146278..1150804- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:1146278..1150804- >mRNA_F-serratus_M_contig8.19341.1 ID=mRNA_F-serratus_M_contig8.19341.1|Name=mRNA_F-serratus_M_contig8.19341.1|organism=Fucus serratus male|type=CDS|length=1944bp|location=Sequence derived from alignment at F-serratus_M_contig8:1146278..1150804- (Fucus serratus male)back to top |