mRNA_F-serratus_M_contig8.19320.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8.19320.1
Unique NamemRNA_F-serratus_M_contig8.19320.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: B7ZGN7_9PHAE (3-isopropylmalate dehydratase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN7_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 5.630e-111
Identity = 177/229 (77.29%), Postives = 192/229 (83.84%), Query Frame = 3 
Query:    3 AFVKPVSTGMALPRQTPTFNQQASSVVRQATAVDVSDPRVKEMPQNRDRPDKYTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMITK 689
            AFV P+S   A      T     SSV RQA A D  DPR KEMP+ R+RP KYTGACFVVKDNIDTDQIIPAE+LTLVPSKADEYEKLGSYAMIGLP VY+ RFVEEG MKT YPIMIAG NFGCGSSREHAPIA+GAAG RVVVAESYARIFFRNSIATGELYPYEC+ER+VD+  TGDE+TVDLSTDTLTNH++GKEY L PLGDA  VI +GGLFP+AI+TGMI K
Sbjct:   22 AFVPPISAAGAAA----TRPACQSSVARQAAASDDMDPREKEMPKFRERPTKYTGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPSVYKTRFVEEGSMKTKYPIMIAGDNFGCGSSREHAPIALGAAGARVVVAESYARIFFRNSIATGELYPYECQERLVDIIKTGDELTVDLSTDTLTNHASGKEYPLTPLGDAAPVINAGGLFPFAIQTGMIKK 246
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: A0A6H5JPR9_9PHAE (Aconitase_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPR9_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 1.160e-109
Identity = 175/236 (74.15%), Postives = 191/236 (80.93%), Query Frame = 3 
Query:    3 AFVKPVST-GMALPRQTPTFNQQASSVVRQATAVD---VSDPRVKEMPQNRDRPDKYTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMITKGDD 698
            AF  PV T G       P     A    R+A   D   + DPRVKEMP+NRDRPDKYTG CFVVKDNIDTDQIIPAE+LTLVPS A+EYEKLGSYAMIGLP VY  R+VEEG M T YPI+IAG NFGCGSSREHAPIA+GAAG RVVVAESYARIFFRNSIATGELYPYEC+ER+VD  +TGD+VTVDL+TDTL NH+TGKEY LNPLGDAG VI +GGLFPYAIKTGMI K D+
Sbjct:   21 AFFVPVPTAGTTAVASRPGCKSSAGVAPRRAAEADAAAIDDPRVKEMPKNRDRPDKYTGQCFVVKDNIDTDQIIPAEYLTLVPSNANEYEKLGSYAMIGLPDVYTTRYVEEGSMATRYPIIIAGDNFGCGSSREHAPIALGAAGARVVVAESYARIFFRNSIATGELYPYECQERLVDAFTTGDDVTVDLTTDTLINHTTGKEYPLNPLGDAGPVINAGGLFPYAIKTGMIKKMDE 256
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: A0A7N0U1F4_KALFE (Aconitase_C domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U1F4_KALFE)

HSP 1 Score: 256 bits (653), Expect = 9.280e-79
Identity = 126/175 (72.00%), Postives = 148/175 (84.57%), Query Frame = 3 
Query:  159 YTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMI 683
            + G C+VVKDNIDTDQIIPAE+LTLVPSK DEY+KLGSYAMIGLP  Y  RF+E GE +T Y I+IAG NFGCGSSREHAP+A+GAAGV+ VVAESYARIFFRNS+ATGE+YP EC+ RI D  STGD VT++L  + L NHSTGKE++L P+GDAG VI++GG+F YA KTGMI
Sbjct:   82 FHGVCYVVKDNIDTDQIIPAEYLTLVPSKPDEYKKLGSYAMIGLPESYRTRFIEPGESETKYSIVIAGDNFGCGSSREHAPVALGAAGVKAVVAESYARIFFRNSVATGEIYPLECEGRICDECSTGDVVTIELKENKLINHSTGKEFALKPIGDAGPVIEAGGIFAYARKTGMI 256
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: D8SLS4_SELML (Aconitase_C domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SLS4_SELML)

HSP 1 Score: 247 bits (630), Expect = 2.130e-76
Identity = 123/176 (69.89%), Postives = 148/176 (84.09%), Query Frame = 3 
Query:  156 KYTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMI 683
            + +G CFVV+DNIDTDQIIPAE+LTLVPSK DEYEKLGSYAM GLP  Y + F+E G+ KT Y I+IAG+NFGCGSSREHAP+A+GA+G++VVVAESYARIFFRNS+ATGE+YP EC+ RI D    GD+VTVD+  D + NHSTGKEY+L PLGDA  VI++GG+F YA +TGMI
Sbjct:    9 QISGKCFVVRDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMAGLPPHYGQ-FMEPGKSKTKYSIIIAGSNFGCGSSREHAPVALGASGIQVVVAESYARIFFRNSVATGEMYPVECEARICDEFHNGDDVTVDMERDVVVNHSTGKEYALKPLGDAAPVIEAGGIFAYARQTGMI 183
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: A0A5K0WYB1_9MAGN (Aconitase_C domain-containing protein n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0WYB1_9MAGN)

HSP 1 Score: 247 bits (630), Expect = 2.230e-75
Identity = 124/180 (68.89%), Postives = 150/180 (83.33%), Query Frame = 3 
Query:  144 DRPDKYTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMI 683
            D   ++ G C+VV DNIDTDQIIPAE+LTLVPSK DEY+KLGS A+IGLP +Y  RFV EG  KT+YPI+IAGANFGCGSSREHAP+A+GA+GV+ VVAESYARIFFRNS+ATGE+YP E + RI +   TGD +TVDLS ++L NH+TGK Y+L P+GDAG VI++GG+F YA KTGMI
Sbjct:   77 DSATRFHGPCYVVADNIDTDQIIPAEYLTLVPSKPDEYQKLGSLALIGLPSLYP-RFVAEGHSKTDYPIVIAGANFGCGSSREHAPVALGASGVKAVVAESYARIFFRNSVATGEVYPIESEARICEECRTGDVITVDLSENSLVNHTTGKVYALKPIGDAGPVIQAGGIFAYARKTGMI 255
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: A0A251VAI3_HELAN (Putative aconitase/3-isopropylmalate dehydratase protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VAI3_HELAN)

HSP 1 Score: 246 bits (629), Expect = 3.360e-75
Identity = 120/175 (68.57%), Postives = 144/175 (82.29%), Query Frame = 3 
Query:  159 YTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMI 683
            + G C+VV+DNIDTDQIIPAE+LTLVPSK DEY+KLGSYA++GLP  YE RFVE GE +T YPI+IAG NFGCGSSREHAP+A+GAAG   VVAESYARIFFRNS+ATGE+YP E + R+ D   TGD VT++L    L NH+TGK+Y+L P+GDAG VI++GG+F YA K GMI
Sbjct:   76 FHGECYVVRDNIDTDQIIPAEYLTLVPSKPDEYKKLGSYALVGLPESYETRFVETGEYRTKYPIIIAGDNFGCGSSREHAPVALGAAGAVAVVAESYARIFFRNSVATGEIYPLESEVRVCDECKTGDVVTIELEKSVLINHTTGKQYALKPIGDAGPVIEAGGIFAYARKAGMI 250
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: A5B9M3_VITVI (Aconitase_C domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5B9M3_VITVI)

HSP 1 Score: 246 bits (628), Expect = 3.770e-75
Identity = 121/175 (69.14%), Postives = 142/175 (81.14%), Query Frame = 3 
Query:  159 YTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMI 683
            + G C+VV DNIDTDQIIPAE+LTLVPS  DEY+KLGSYA IGLP  YE RF+E GE+KT Y I+IAG NFGCGSSREHAP+A+GAAG R VVAESYARIFFRNS++TGE+YP E + RI +   TGD VT++L    L NH+TGKEY LNP+GD G VI++GG+F YA KTGMI
Sbjct:   74 FHGLCYVVHDNIDTDQIIPAEYLTLVPSNPDEYQKLGSYAFIGLPSSYETRFIEAGELKTKYTIVIAGQNFGCGSSREHAPVALGAAGARAVVAESYARIFFRNSVSTGEVYPLETEVRICEECRTGDVVTIELGESKLINHTTGKEYKLNPVGDVGPVIEAGGIFAYARKTGMI 248
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: UPI002009A417 (3-isopropylmalate dehydratase small subunit 1-like n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A417)

HSP 1 Score: 243 bits (621), Expect = 4.740e-75
Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 3 
Query:  159 YTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMITKGD 695
            + G C+VV DNIDTDQIIPAE+LTLVPS  DEYEKLGSYA+IGLP  YE RFVE G  KT Y I+I G NFGCGSSREHAP+A+GAAGV  VVAESYARIFFRNS+ATGE+YP E + R+ +  +TGD VT++L    L NH+TGKEY L P+GDAG VI++GG+F YA K GMI   D
Sbjct:    8 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSTYESRFVEPGATKTKYSIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFFRNSVATGEIYPLESEGRLCEECTTGDVVTIELGESKLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKAGMIPSRD 186
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BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: A0A151SGS1_CAJCA (3-isopropylmalate dehydratase small subunit n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SGS1_CAJCA)

HSP 1 Score: 245 bits (626), Expect = 5.080e-75
Identity = 122/175 (69.71%), Postives = 142/175 (81.14%), Query Frame = 3 
Query:  159 YTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMI 683
            + G C+VV DNIDTDQIIPAE+LTLVPSK DEYEKLGSYA+IGLP  Y  RF++ GE KT Y I+IAG NFGCGSSREHAP+A+GAAGV  VVAESYARIFFRNS+ATGE+YP E + RI +   TGD VT++L    L NH+TGKEY L P+GDAG VI++GG+F YA KTGMI
Sbjct:   64 FHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPASYATRFIDAGETKTKYSIVIAGDNFGCGSSREHAPVALGAAGVSAVVAESYARIFFRNSVATGEVYPLESERRICEECHTGDVVTIELGESRLINHTTGKEYQLKPIGDAGPVIEAGGIFAYARKTGMI 238
[Close]
BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Match: V7APZ2_PHAVU (Aconitase_C domain-containing protein n=6 Tax=Phaseoleae TaxID=163735 RepID=V7APZ2_PHAVU)

HSP 1 Score: 246 bits (627), Expect = 5.150e-75
Identity = 121/175 (69.14%), Postives = 143/175 (81.71%), Query Frame = 3 
Query:  159 YTGACFVVKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGEMKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAGLVIKSGGLFPYAIKTGMI 683
            + G C+VV DNIDTDQIIPAE+LTLVPSK DEYEKLGSYA++GLP  Y  RFV+ GE KT Y I+I GANFGCGSSREHAP+A+GAAGV  VVAESYARIFFRNS+ATGE+YP E + R+ +   TGD VT++L    L NH+TGKEY LNP+GDAG VI++GG+F YA K+GMI
Sbjct:   75 FHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPASYATRFVDAGETKTKYAIVIGGANFGCGSSREHAPVALGAAGVSAVVAESYARIFFRNSVATGEVYPLESESRLCEECRTGDVVTIELGESRLINHTTGKEYRLNPIGDAGPVIEAGGIFAYARKSGMI 249
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7ZGN7_9PHAE5.630e-11177.293-isopropylmalate dehydratase (Fragment) n=1 Tax=L... [more]
A0A6H5JPR9_9PHAE1.160e-10974.15Aconitase_C domain-containing protein n=2 Tax=Ecto... [more]
A0A7N0U1F4_KALFE9.280e-7972.00Aconitase_C domain-containing protein n=2 Tax=Kala... [more]
D8SLS4_SELML2.130e-7669.89Aconitase_C domain-containing protein n=3 Tax=Sela... [more]
A0A5K0WYB1_9MAGN2.230e-7568.89Aconitase_C domain-containing protein n=1 Tax=Nymp... [more]
A0A251VAI3_HELAN3.360e-7568.57Putative aconitase/3-isopropylmalate dehydratase p... [more]
A5B9M3_VITVI3.770e-7569.14Aconitase_C domain-containing protein n=2 Tax=Viti... [more]
UPI002009A4174.740e-7567.603-isopropylmalate dehydratase small subunit 1-like... [more]
A0A151SGS1_CAJCA5.080e-7569.713-isopropylmalate dehydratase small subunit n=1 Ta... [more]
V7APZ2_PHAVU5.150e-7569.14Aconitase_C domain-containing protein n=6 Tax=Phas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:806858..811408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score343.2
Seed ortholog evalue9.2e-92
Seed eggNOG ortholog2880.D8LRK8
KEGG rclassRC00497,RC00976,RC00977,RC01041,RC01046,RC03072
KEGG koko:K01704,ko:K21359
KEGG ReactionR03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170
KEGG Pathwayko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230
KEGG ModuleM00432,M00535
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006551,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009657,GO:0009658,GO:0009987,GO:0016043,GO:0016053,GO:0016143,GO:0016144,GO:0016829,GO:0016835,GO:0016836,GO:0019748,GO:0019752,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0046394,GO:0048229,GO:0048856,GO:0050896,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901657,GO:1901659
EggNOG free text desc.3-isopropylmalate dehydratase activity
EggNOG OGsCOG0065@1,KOG0454@2759
Ec32 ortholog description3-isopropylmalate dehydratase
Ec32 orthologEc-12_000170.1
EC4.2.1.170,4.2.1.33,4.2.1.35
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons7
Model size1500
Cds size672
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932377.0536442-UTR-F-serratus_M_contig8:806857..8076561622932377.0536442-UTR-F-serratus_M_contig8:806857..807656Fucus serratus maleUTRF-serratus_M_contig8 806858..807656 -
1690964278.4188135-UTR-F-serratus_M_contig8:806857..8076561690964278.4188135-UTR-F-serratus_M_contig8:806857..807656Fucus serratus maleUTRF-serratus_M_contig8 806858..807656 -
1622932377.170623-UTR-F-serratus_M_contig8:811379..8114081622932377.170623-UTR-F-serratus_M_contig8:811379..811408Fucus serratus maleUTRF-serratus_M_contig8 811380..811408 -
1690964278.5166373-UTR-F-serratus_M_contig8:811379..8114081690964278.5166373-UTR-F-serratus_M_contig8:811379..811408Fucus serratus maleUTRF-serratus_M_contig8 811380..811408 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932377.069679-CDS-F-serratus_M_contig8:807656..8077661622932377.069679-CDS-F-serratus_M_contig8:807656..807766Fucus serratus maleCDSF-serratus_M_contig8 807657..807766 -
1690964278.4342942-CDS-F-serratus_M_contig8:807656..8077661690964278.4342942-CDS-F-serratus_M_contig8:807656..807766Fucus serratus maleCDSF-serratus_M_contig8 807657..807766 -
1622932377.0835745-CDS-F-serratus_M_contig8:808272..8083751622932377.0835745-CDS-F-serratus_M_contig8:808272..808375Fucus serratus maleCDSF-serratus_M_contig8 808273..808375 -
1690964278.4458926-CDS-F-serratus_M_contig8:808272..8083751690964278.4458926-CDS-F-serratus_M_contig8:808272..808375Fucus serratus maleCDSF-serratus_M_contig8 808273..808375 -
1622932377.0970855-CDS-F-serratus_M_contig8:808698..8087941622932377.0970855-CDS-F-serratus_M_contig8:808698..808794Fucus serratus maleCDSF-serratus_M_contig8 808699..808794 -
1690964278.4571154-CDS-F-serratus_M_contig8:808698..8087941690964278.4571154-CDS-F-serratus_M_contig8:808698..808794Fucus serratus maleCDSF-serratus_M_contig8 808699..808794 -
1622932377.1086211-CDS-F-serratus_M_contig8:809370..8094471622932377.1086211-CDS-F-serratus_M_contig8:809370..809447Fucus serratus maleCDSF-serratus_M_contig8 809371..809447 -
1690964278.4681802-CDS-F-serratus_M_contig8:809370..8094471690964278.4681802-CDS-F-serratus_M_contig8:809370..809447Fucus serratus maleCDSF-serratus_M_contig8 809371..809447 -
1622932377.120311-CDS-F-serratus_M_contig8:809837..8099071622932377.120311-CDS-F-serratus_M_contig8:809837..809907Fucus serratus maleCDSF-serratus_M_contig8 809838..809907 -
1690964278.4791415-CDS-F-serratus_M_contig8:809837..8099071690964278.4791415-CDS-F-serratus_M_contig8:809837..809907Fucus serratus maleCDSF-serratus_M_contig8 809838..809907 -
1622932377.1376975-CDS-F-serratus_M_contig8:810962..8111391622932377.1376975-CDS-F-serratus_M_contig8:810962..811139Fucus serratus maleCDSF-serratus_M_contig8 810963..811139 -
1690964278.4926927-CDS-F-serratus_M_contig8:810962..8111391690964278.4926927-CDS-F-serratus_M_contig8:810962..811139Fucus serratus maleCDSF-serratus_M_contig8 810963..811139 -
1622932377.1562896-CDS-F-serratus_M_contig8:811340..8113791622932377.1562896-CDS-F-serratus_M_contig8:811340..811379Fucus serratus maleCDSF-serratus_M_contig8 811341..811379 -
1690964278.5024242-CDS-F-serratus_M_contig8:811340..8113791690964278.5024242-CDS-F-serratus_M_contig8:811340..811379Fucus serratus maleCDSF-serratus_M_contig8 811341..811379 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19320.1prot_F-serratus_M_contig8.19320.1Fucus serratus malepolypeptideF-serratus_M_contig8 807657..811379 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8.19320.1

>prot_F-serratus_M_contig8.19320.1 ID=prot_F-serratus_M_contig8.19320.1|Name=mRNA_F-serratus_M_contig8.19320.1|organism=Fucus serratus male|type=polypeptide|length=224bp
MALPRQTPTFNQQASSVVRQATAVDVSDPRVKEMPQNRDRPDKYTGACFV
VKDNIDTDQIIPAEFLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVEEGE
MKTNYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIA
TGELYPYECKERIVDLSSTGDEVTVDLSTDTLTNHSTGKEYSLNPLGDAG
LVIKSGGLFPYAIKTGMITKGDD*
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mRNA from alignment at F-serratus_M_contig8:806858..811408-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8.19320.1 ID=mRNA_F-serratus_M_contig8.19320.1|Name=mRNA_F-serratus_M_contig8.19320.1|organism=Fucus serratus male|type=mRNA|length=4551bp|location=Sequence derived from alignment at F-serratus_M_contig8:806858..811408- (Fucus serratus male)
CAGCATTTGTTAAACCCGTATCTACCGGGATGGCTCTTCCGAGACAGACC
CCAACCTTCAACCAGCAGGTGCGACGGAACGACAGGTACTTGAAACTTTA
AAGTTATTTTCTTTATCTGCAACGTTCCTCTACTCCCTGTCCACGCCGCA
AACCGCCGGCCCCAAGGCCACCACCCGTTATGTCATGCGCTGCAGCCGAT
ATTCCGTATGACGTGCATCGATCAAATATGTATTTTTGCATCATCCATTG
TTATCTGTGGTTCGGGCAGGCCAGCAGTGTTGTACGGCAAGCAACCGCCG
TGGATGTGAGCGATCCACGAGTCAAGGAAATGCCTCAGAACAGGGATCGG
CCAGACAAGTATACAGGGGCTTGCTTCGTGGTGAAGGATAATATCGACAC
GGATCAGATCATCCCCGCGGAGTTTCTCACCCTTGTGCCATCTAAGGTAT
AGCGCTTGCCGTGCAAAAGTCTGCCCGCGCAACGGTGTGACTCCAAACGG
GCCAGTCTGTTGCGCGTGTCGGCATCTCTGTTTTCACCCACAAGTTTCGG
TTCTCTGCCAAAGACAGCGGGACTTCCGTTTGACTGTTTTTCAAGTGTTC
GCGTCTTTCCCGTCAGATCGTTTGTTTTGGGAGGAAGTAGGAAGCTGAAA
CCGAATTAATGGCCCTTTTTGGGCTTTTATAGCTAGAAACTGGCGCAATT
TTATTTACGACAGCAGGCAGTCTTGTTTCCGAGGATTGAGAGCCGCTTTC
CGGTAGGGTGGGGGGCTGCGGGAAACTGGGGAAAGGCGATCACGCATGAT
CATCCAACTCGTGCGGCGGCCGTAGCTCTGAAAAATTAGTGATGCTGACC
GAGCCTTGTCTGTAGCGCTGAAAGCGCCTTCGGAGTAGTATTTCTAGACC
TTATGAAGTGGATTCCAGACGGTAACAGCAGACATGGGCCGTCCGCCAAC
CGGACCTGGCTCCCTCGGACACGACTTGAACAAGACACAGCCTTGCCGTC
TTCTCTAGTAGGACCACGACTACCGTGGTCGCCACTGAAGCGCTGGGCCA
AGCTGGATCAGCAACTGTAACTCTTCGGACTTCTTCGTTGAACCACTTTG
TTTCTATATTTTCGTCTCCCTGTCGATTTGCCGCCACCAACTTGTCGAAC
TCTCAATTTCTGAATATTTGGCTTTAGCGGATAGCCGCGGGTATTCAACT
GGAAGAGAATGAACCGCCGGAAATTGACCTATTAATAGTTTCAATTTTCG
ATCAACGATCGTAAGAAATGGTGTTCTTTATTCTACAAGTACTGTTAGAA
ATCATACGAATTATGTAACTTATATCTCCTTCTAGACCCATGAGTATCAT
GCTCCTAGAGACAGCACTGTAATAATAGTTGTTAGTGCTTTCGTCCATGA
CGATCTTCACTCTTACCCTGGACCGAACTAGATATCTTGCGTTTTCAAAG
GCCGGGTTCCTTTCTACTCACCGCCTACTTCCCCGCCTTTTCACTTCGCA
GGCGGACGAGTACGAAAAGCTGGGTTCGTACGCCATGATAGGGCTGCCAG
GCGTGTACGAGAAGCGCTTTGGTGAGACATGAAGGCCTTTGTTTCCTCGG
ATAGACAGTGCTGCCCCACTCTGTTTGCTTAGGTTCATGTTGTGGGAATG
GATACGTACGACTACTCTTCGGAACAAGGACCGTACCCAACGGAAGGAAA
CCCTAAGAATGAAGGGATGGATCCGTGCGAGCGTTCTCGTGTGGGCCGAT
AAGGATTTTTGAGTGCCGTGTTCGGGTGCACCAGTACGAGATCCTATTAA
TAGTTGAGGTTAACTGTTTCTACCACACTCTCAGAAGCGTAGTGTGTTCG
ATTCGCAGAGGCAGGGTTCCCGGAAAAACCGCATGAGTTCCCCCCTCTCT
GACCCGGATTAATCCGACATCCCGCAATATCACACTGCTGTGTGCCTGCT
GTGCTTTCCAGTGGAGGAGGGTGAGATGAAGACCAACTACCCCATCATGA
TTGCAGGGGCCAACTTCGGCTGTGGCTCATCGCGGGAGGTAGCTAATCCC
GCATCCGGTTTTGTCTCTTTTTGACCATTACGTGTCCGTTCAATTGGAGC
ACACGGCAGTTCACGATGTACTATTAATAGTACTGACCTAGAAATTCATG
AACGAGCGCTGCGCATGAAAGAAGCTATTTGGCACAAAGGTTTCTAGGAT
TACAACATCGTTGCTGTCGAAAAACTGGGATATCATAAATATTCCATCCT
CGGAGAGTTTTTTTTATCCTCCGTTTGTGTTGTGCGTTGGATTGTTACAC
GCTGAAAAAAGGCGCCCAACTTATGTACAGTTGCTTGCACCAACACGTAC
GCACTATCGCTGTCTTGAGTCAAATAGGCCTTTTCTGTTTGGACTGCGAG
CGCCGGTCTTTACACGCAACACAACATTTTGTAGCGCACTAGGATTATTC
TATCCTACCGCGAAGCATTTCCAGCGTGCCCTCAGACTGAGTCAACCGTG
TAATGTTGTCCAAATTTGAACGGTAGTCCTTTCTCCCCCACTCGTCTAAA
GATGTCGAGCGCAAGCCTGAGCTGGCCAAATCCTGACTCCCCTTTGACCT
CGAAATACCCACAGCATGCGCCGATCGCCATGGGAGCGGCGGGTGTTCGA
GTTGTTGTCGCAGAGTCGTACGCGCGGATCTTCTTCCGGAATTCGATCGC
GACAGGCGAGGTGAGAGATCGCGATTTTCCCTGCCTTCCCGTTTCACACT
CATGCGCCATGTTTTACTGTTGAAACATTATTCCTCCCGTCGAGTGCGGG
TGACCTTTGCTACTCGCCCGGCGCGGCGCCCCTCAATCTCCTGAGCTCTA
CCCAAGCCGACGTTGGATGAGTCCCGCTTGTTTCGCGAGCTTTCATGGAT
AGGGTGGCGCTCGGCACAGACCACTGGCCCCATTACCCCTTACCTTCTGT
TAAATACAATTGTTGTCCGCGGGGTTTAAAAGCACATTTCTCATGACGTC
TGCTGCACGACCGGCCCTTAACGCTTTCTTCAGCTATATCCTTACGAGTG
CAAGGAAAGGATAGTAGACCTCTCCAGCACGGGAGACGAGGTCACCGTCG
ATCTCTCCACGGACACGTTGACCAACCACTCCACAGGTGAGAGCTTGTCG
ACATGTAGTAGAGCTAAATAGTGTTTACTTTTACTAATGTGGTTGCTACG
ATCCGCCTATGATAACGCGATTTCGACCTGCGGCGAGGCTTTTGAAATGA
AATTGATAATAAGCCATGGTTTGCAAGGTATCCCTTAAAATGAATTTAAT
TTCACCTGTCGAAGCGACGGTGTCGCCCGGACGAAGATACGAGGACTCCC
GAACACCGCAGTGTGCCTGGTTCTCAAGGCGCCGCCAGCCAGTTCACGCT
CGCCGACGCGCAAAATTGGAGATAATGTGGTTCTCTCTACATGACAAGAC
TTATGCGACAACCTCATGACCGCCGATCGCACAAAAACACACGATGCTAA
GACAACTTTATTTTCTGCGCTACTTGACAAGTCTCGTAGTTATGAGATGT
GGAAGTTGACATTCAATCGAGTGACACGTTTGTGCAAACAACCCTTCCTC
GTCGCAAAATCGATTTATCCGCACTCCGCGCGCTACCTACAGGCAAGGAG
TACTCGCTCAACCCCCTTGGAGACGCCGGACTAGTGATCAAGAGTGGTGG
CTTGTTTCCGTACGCAATAAAGACGGGCATGATAACCAAAGGAGATGATT
AAGGTCCAGAATACACTGCTGTAGAGACGGAAAATTTCAATGTTACCCCT
CATCAAGGGGCACTCACGAGGGATGAGTCTGCGGCATCGTCGCTTGCGTG
TTCGCGCTTAGCCGTGTAGCACGTCACAATTTGCTGGCATGACAAATAAT
TCTTTGTCGACAAGGAGCCGCGTCTTCGTGTTACAGACTTCCAAATCAAA
CACAACGCGCGGAAAATATTACACCGTGATCGAAGACTCAAAGCCCCGTG
CGCTTGCCTATGCTTCGCGACGCTGGGGATTGCCCGGGCGCGGCAGCAGC
TGGATGTTGACTTTGCCAACCAGGTCTCTCCCACGCATCGGCACCAAAGT
TTGGAGTTGATGCTGGTGGCCCGTGAGGCATGATTGGTCCCATGGGTGGT
GGATAACGCCGGCGAAAGCGGGGCGTACGGGCCTCTTGCATCGCACAATA
GCGGCCTGTATAGTATCCGCTGCGCGAGTCGAGGGTGGGCAAGAGTGCAA
GGGAATTAGGAGGGGTACTGAGGTACTTGTATGTTTTTTATTGTTGTGCT
TGACAGTTTTTAAAGAAATACGGAGTGGACTCCTGTGATCCGGGCGGACT
GTAGGTCAAAAGGGTCCGTATAGATAAATTCCCAGATACAGAATCTTCAC
ATCGTGAGGGAAAGTTACGACGCGCCGCATCTCCTTGCTGAAACATACCT
GTAGTACCACGCCAGGAGTAGATCCGCCAGGTCGTCGTCCATCACACCAT
CCAAGGACTGCAAAAAAGAATCGAAACAAGCACGATAAAAATTCGGTGTT
T
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Coding sequence (CDS) from alignment at F-serratus_M_contig8:806858..811408-

>mRNA_F-serratus_M_contig8.19320.1 ID=mRNA_F-serratus_M_contig8.19320.1|Name=mRNA_F-serratus_M_contig8.19320.1|organism=Fucus serratus male|type=CDS|length=1344bp|location=Sequence derived from alignment at F-serratus_M_contig8:806858..811408- (Fucus serratus male)
ATGGCTCTTCCGAGACAGACCCCAACCTTCAACCAGCAGATGGCTCTTCC
GAGACAGACCCCAACCTTCAACCAGCAGGCCAGCAGTGTTGTACGGCAAG
CAACCGCCGTGGATGTGAGCGATCCACGAGTCAAGGAAATGCCTCAGAAC
AGGGATCGGCCAGACAAGTATACAGGGGCTTGCTTCGTGGTGAAGGATAA
TATCGACACGGATCAGATCATCCCCGCGGAGTTTCTCACCCTTGTGCCAT
CTAAGGCCAGCAGTGTTGTACGGCAAGCAACCGCCGTGGATGTGAGCGAT
CCACGAGTCAAGGAAATGCCTCAGAACAGGGATCGGCCAGACAAGTATAC
AGGGGCTTGCTTCGTGGTGAAGGATAATATCGACACGGATCAGATCATCC
CCGCGGAGTTTCTCACCCTTGTGCCATCTAAGGCGGACGAGTACGAAAAG
CTGGGTTCGTACGCCATGATAGGGCTGCCAGGCGTGTACGAGAAGCGCTT
TGGCGGACGAGTACGAAAAGCTGGGTTCGTACGCCATGATAGGGCTGCCA
GGCGTGTACGAGAAGCGCTTTGTGGAGGAGGGTGAGATGAAGACCAACTA
CCCCATCATGATTGCAGGGGCCAACTTCGGCTGTGGCTCATCGCGGGAGT
GGAGGAGGGTGAGATGAAGACCAACTACCCCATCATGATTGCAGGGGCCA
ACTTCGGCTGTGGCTCATCGCGGGAGCATGCGCCGATCGCCATGGGAGCG
GCGGGTGTTCGAGTTGTTGTCGCAGAGTCGTACGCGCGGATCTTCTTCCG
GAATTCGATCGCGACAGGCGAGCATGCGCCGATCGCCATGGGAGCGGCGG
GTGTTCGAGTTGTTGTCGCAGAGTCGTACGCGCGGATCTTCTTCCGGAAT
TCGATCGCGACAGGCGAGCTATATCCTTACGAGTGCAAGGAAAGGATAGT
AGACCTCTCCAGCACGGGAGACGAGGTCACCGTCGATCTCTCCACGGACA
CGTTGACCAACCACTCCACAGCTATATCCTTACGAGTGCAAGGAAAGGAT
AGTAGACCTCTCCAGCACGGGAGACGAGGTCACCGTCGATCTCTCCACGG
ACACGTTGACCAACCACTCCACAGGCAAGGAGTACTCGCTCAACCCCCTT
GGAGACGCCGGACTAGTGATCAAGAGTGGTGGCTTGTTTCCGTACGCAAT
AAAGACGGGCATGATAACCAAAGGAGATGATTAAGCAAGGAGTACTCGCT
CAACCCCCTTGGAGACGCCGGACTAGTGATCAAGAGTGGTGGCTTGTTTC
CGTACGCAATAAAGACGGGCATGATAACCAAAGGAGATGATTAA
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