mRNA_F-serratus_M_contig8.19315.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8.19315.1
Unique NamemRNA_F-serratus_M_contig8.19315.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: D8LRK3_ECTSI (TFIIS N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK3_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 6.730e-114
Identity = 196/295 (66.44%), Postives = 239/295 (81.02%), Query Frame = 3
Query:  984 SEAEEDNGAEMQEEAPVQQSAMDAVLKSMKRRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEV-SASGSTSHGVRRQGGASWGHLKREDPSRDEAVGNILNAKARGLDPAGTRVPYSTGYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKK 1865
            SEAEEDN  E   +AP ++SAM AVL SMK+RKAQ+LSTAEREQIAQEF++KIN+A+EDDE+AV+ GRPA+ K+KM++VVKATLAKKELQETFLEFDLLGV+ RWLQPY NG++PNLT+R ++L L+  LPVQVDHLKRSGIGK+VMGL N +EET ENK  +R+LVSKWNRPVY ++ +YRA R  +++ EA+EV +  G              G ++R+  S+DEAVGNILNA+ARGLDP   RVP+S GYAF+KAPRSRVE HGR P QQVDTS+R+KLLKKMA LSRPV K
Sbjct:  326 SEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCREETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPTRGGXXXXXXXXXXXVVHGSMRRDGASKDEAVGNILNARARGLDPTKARVPFSNGYAFSKAPRSRVEGHGRAPAQQVDTSSRAKLLKKMATLSRPVNK 620          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: A0A835YPY7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 4.930e-42
Identity = 103/270 (38.15%), Postives = 158/270 (58.52%), Query Frame = 3
Query: 1068 MKRRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKN-GRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPSRDEAVGNILNAKARGLDPAGT----RVPYSTGYAFAKAPRSRVESHGRQPGQ---QVDTSARSKLLKKMAHLSR 1853
            MKR + Q+LS AER+  AQ+F++ ++ A+ +DE+ V+EG+PA  K+K LK V+ TL+K++L ET LE DLL  + +W+ PY+  G +P+L +RK M A+LL LPV+ +HLKRS +G  +M +    EET ENK  + +L+ KW RP+Y +    R +  ++EE   IE+S         RRQ       + ++  S  E+V ++  A A     A T    RVP S G  F   P+SRV++     G    Q   ++++KL K+M  L +
Sbjct:    1 MKRIRGQQLSIAERDTFAQDFMHFMDTAAAEDERLVREGKPAFAKIKALKAVQRTLSKQDLWETLLEVDLLTGVKKWISPYEGRGTLPSLDVRKAMYAILLTLPVEKEHLKRSQLGMTIMAMKQHPEETAENKRTLAQLIEKWCRPIYNKGTDLRELSRVQEE---IELSRD------ERRQA-----MIPKKQTSAQESVKDVFQAAAAXXXXADTAKRVRVPRSHGLVFQHRPQSRVDTEMMNTGAGAPQEPATSQAKLTKRMLELGK 256          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: A0A2D4BW91_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW91_PYTIN)

HSP 1 Score: 169 bits (428), Expect = 1.150e-39
Identity = 116/341 (34.02%), Postives = 178/341 (52.20%), Query Frame = 3
Query:  858 EEAEAVDKEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSAMDAVLKSMK--RRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPSRDEAVGNILNAKARGLDPAGTR--VPYSTGYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKKG 1868
            +E ++ D+  RT++D +FID  DD  D+L EY  +      E   E+D     Q      +   +  LKS+K  RR   +LS  E+EQI QE +Y+++KA  DD  ++ E RPAL ++K +      L K +LQ TFL+FDLL  I +W+QP  +G +PNL +R ++L ++  LPV  +HLKRSG GK+VM L+   EETRENK + R+L+ +W+R V+ +   Y  +          E+ A  + + G RR    S         SRD A     ++      P   R  +P    + F   P+ +VE       +    S + +L K+M  ++RP +KG
Sbjct:  651 DEYDSGDEVVRTREDDEFIDQEDDLADVLGEYDQEDQKFDDERPLEDDP---RQPGRTKDEDYFEQTLKSLKTGRRSKMQLSVQEQEQIVQEVLYRLDKAHADDLASIAERRPALERIKYVDEAVRVLRKHQLQPTFLDFDLLSFIKKWIQPLDDGTLPNLGVRTKLLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRENKELCRDLIERWSRAVFEKTLDYSKL---------AELEAEKAENMGYRRPDRRSSAQKTASSSSRDGANPFSGHSSEPKDGPVSERAMLPQQLRFDFVHRPQPKVELQAASKAKVETDSRKGRLAKRMQEIARPGRKG 979          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: A0A485LKM7_9STRA (Aste57867_22366 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKM7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.730e-38
Identity = 113/348 (32.47%), Postives = 183/348 (52.59%), Query Frame = 3
Query:  849 VREEEAEAVDKEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSAMDAVLKSMKR---RKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPSRD-EAVGNILNAKARGLDPAG----TRVPYSTGYAFAKAPRSRVESHGRQPGQQVDT-SARSKLLKKMAHLSRPVKK 1865
            V  +E ++ ++  RT+DD  FIDD DD   +L EY  D      E   EE++    + EA   +   D  +KSMK    R   ++S  E E + QE +Y ++KA  DD  A+ E RPAL KLK++  V   + K +LQ+  L+FDLLGVI +W+QP +NG +PNL +R +M+ +   LP+  +HLKRSG GK++M L+   +E+ ENK + R+L+ +W+R V+ +   +  +  ++ E                   GG      +R+  SR  E     L+ +A   D        R+P S    F   P+ +++     P  ++D  S +++L+K+M  ++RP K+
Sbjct:   84 VEGDEYDSGEEVERTKDDEAFIDDEDDLGGVLDEYNQDNQTFDDERPEEEEDRFTRRREA---EDFFDETMKSMKSGRGRSKLKMSQQEIETLTQEVLYNMDKAYNDDLVAMDERRPALEKLKLVDKVLLLMRKVQLQQPLLDFDLLGVIKKWIQPMENGSLPNLGLRTKMIEICQRLPIDKEHLKRSGFGKVIMTLWKHPDESVENKEICRQLIDRWSRSVFSKTLDFSKLGELEAEKREAN--------------GGMRGPAERRQQASRAMERNRGFLDKQADPADAGNGSERVRIPESIRIDFTMRPQPKIDVSN-MPSNKIDPESKKARLMKRMQTIARPTKR 413          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: A0A1V9ZKU1_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKU1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.630e-38
Identity = 108/346 (31.21%), Postives = 184/346 (53.18%), Query Frame = 3
Query:  858 EEAEAVDKEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSAMDAVLKSMKRRKAQE---LSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPSRDEAVGN--ILNAKARGLDPAGT----RVPYSTGYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKKG 1868
            +E ++ ++  RT++D  FID+ DD  D+L EY +D      E   E+D  +  ++  P      D  LKS+K  +A+    LS  E E + QE +Y+++KA  DD +A++E RPAL KLK +      + K +LQ   L+FDLLG+I +W+QP ++G +PNL++R +ML +   +P+  +HLKRS  GK +M L+   +ET ENK + R+++ +W+R V+ +   Y  +  ++ E                R   G  +   ++    R E+V N   LN +    + A      R+P +  + F+  P+ +V+       +    S ++KL+K+M  ++RP K G
Sbjct:   91 DEYDSGEEAVRTKEDDAFIDNDDDLDDVLNEYGNDKQEFHDERPDEDDEPSSRRQREP---DYFDETLKSLKSGRAKSKMALSQQEMESLTQELLYRMDKAHSDDVQAMEEHRPALEKLKFVDNALMMMRKVQLQPMLLDFDLLGIIKKWIQPMESGTLPNLSLRSKMLDMCQRMPIYKEHLKRSSFGKAIMALWKHPDETPENKELCRQMIDRWSRSVFSKTLDYSKLAELEAEK---------------REANGGYYRQAEKRPTGRTESVRNRGFLNKRTDANEDADASSRVRIPQAMRFDFSLRPQPKVDVKNLPTNKLDPDSKKAKLMKRMQIIARPSKGG 418          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: A0A067C2C7_SAPPC (TFIIS N-terminal domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2C7_SAPPC)

HSP 1 Score: 156 bits (395), Expect = 1.360e-37
Identity = 109/347 (31.41%), Postives = 183/347 (52.74%), Query Frame = 3
Query:  858 EEAEAVDKEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSAMDAVLKSMKRRKAQE---LSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPS-RDEAVGN--ILNAKARGLDPAGT----RVPYSTGYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKKG 1868
            +E ++ D+  R++ D  FID+ DD  D+L EY +D      E    +D+  E  E    +    D  +K +K  +A+    LS  + E I QE +Y+++KA  DD +A+ E RPAL KLK +      + K +LQ   L+FDLLG+I +W+QP  NG +P+L++R +ML +   +P+  +HLKRSG GK+VM L+   +ET ENK + R ++ +W+R V+ +   Y  +   + E                +R+    + H   + PS R E+V +   +N ++   + A      R+P +  + F+  P+ +V+       +    S ++KLLK+M  ++RP K G
Sbjct:   90 DEYDSGDEVKRSKADDAFIDNDDDLDDVLDEYGNDKQEFHDERPDMDDDEDEAPERQQRELDFFDETMKGLKSGRAKSKMSLSQQDMENITQELLYRMDKAYSDDVQAIDEHRPALEKLKFVDNALTMMRKVQLQPMLLDFDLLGIIKKWIQPLDNGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSKTLDYSKLGEYEAE----------------KREANGGYYHQAEKRPSGRTESVRSKGFMNKRSDANEDADASSRVRIPQAMRFDFSLRPQPKVDVKNIPSTKMDPDSKKAKLLKRMQIIARPSKGG 420          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: A0A8K1CB40_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB40_PYTOL)

HSP 1 Score: 159 bits (402), Expect = 2.950e-37
Identity = 116/350 (33.14%), Postives = 184/350 (52.57%), Query Frame = 3
Query:  858 EEAEAVDKEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSAMDAVLKSMK--RRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDP--SRDEAVGNILNAKA----------RGLDPAGTRVPYSTGYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKK 1865
            +E ++ D+  RT+DD  FID  DD  D+L EY  D      E    ED G   +E+        +  LKS+K  RR    LS  E+EQI QE +Y+++KA  DD  ++ E +PAL ++K +      L K++LQ TFL+FDLL  I +W+QP ++G +PNL +R +ML ++  LPV  +HLKRSG GK+VM L+   EETR+NK++ R+L+ +W+R V+ +   Y  +          E+ A  + + G RR         +++ P  SR E   N  + +           R + P+  RV +         P+  V++      +    + +S+L K+M  ++RP +K
Sbjct:  290 DEYDSGDEIVRTKDDDAFIDQDDDLEDVLGEYDEDDQKFEDERPLPEDVGGRKEEDY------FEETLKSLKTGRRAKMNLSVQEQEQIVQEVLYRMDKAHADDLASIAERKPALERIKYVDHAIRVLRKQQLQPTFLDFDLLSFIKKWIQPLEDGTLPNLGVRTKMLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRDNKDLCRDLIERWSRAVFDKTLDYSKL---------AELEAEKAENMGYRRPE-----RRQQQKPAVSRSEYGANPFSGRTSEPKDGPVTERAILPSQLRVDF----LHRPQPKVDVQTAASMKVENNADTRKSRLSKRMLEIARPGRK 615          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: A0A5D6XSN7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSN7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.020e-36
Identity = 120/357 (33.61%), Postives = 186/357 (52.10%), Query Frame = 3
Query:  858 EEAEAVDKEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSAMDAVLKSMK--RRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYG----------------QDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPSRDEAVGNILNAKARGLDPAGTRVPYSTGYAFAKAPRSRVESHG---RQPGQQVDTSARSKLLKKMAHLSRPVKK 1865
            +E ++ D+   T+DD DFID  DD  D+L EY  DA     E   +E  G   +EE   + +  D  LKS+K  RR   +LS  E E I QE +Y+++KA +DD  ++ E RPAL K+K +      + K +LQ   L+FDLL +I +W+ P  +G +PN+ IR +ML ++  +P+  +HLKRSG GK+VM L+   EETRENK++ R+L+ +W+R V+                 ++A+YR  R  K        ++S S    V  +GG S G +K    S D A                  +P    + F   PRS++E +    ++     DT  +++L K+M  +++P KK
Sbjct:   79 DEYDSGDEVVHTKDDEDFIDRDDDLADVLGEYDEDAQRFDDERPLDEHAGRSAKEE---EDAFFDDTLKSLKTGRRSKMKLSPQEMENITQEMLYRMDKAHQDDLVSIAERRPALEKIKYVDHALMLMRKHQLQPMLLDFDLLSLIKKWIHPLDDGALPNVGIRTKMLNMVAEMPIYKEHLKRSGFGKVVMLLWKHPEETRENKDLCRDLIERWSRSVFNKTLDFSKLAELEAEKAENATYR--RQEKXXXXXXXXTSSRSQGGDVFARGGDS-GDVKPATNSSDRAA-----------------IPQQLRFDFLHRPRSKIEMNNEMAKKAPADADTR-KARLAKRMQSIAKPGKK 411          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: F0WGB7_9STRA (Uncharacterized protein AlNc14C90G5648 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGB7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 5.810e-36
Identity = 111/362 (30.66%), Postives = 184/362 (50.83%), Query Frame = 3
Query:  846 PVREEEAEAVD---KEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSA-MDAVLKSMK---RRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPSRDEAVG---------NILNAKARGLDPAGT-----RVPYSTGYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKKG 1868
            P R  +A+  D   + A T++D DFID  DD  D+L EY  +      E   +      +++EA  ++    D  LKS+K   R     LS  + E++ QE +++++KA  +D+ A+  GRPA  K+K +      + K+ LQ   L+FDLL +I +W+QP  +G +PNL +R +M++++  LP+  +HLKRSG GK++M L+   +ET ENK + RE++ +W+R V+ +   Y  +          E+ A  + S   RR           + PS   A G         N  N + R +D  GT     R+P    + F   P+ +V+       +    S + +LLK+M+ +++P KKG
Sbjct:   91 PQRRNDADEYDSGEEAAPTKEDDDFIDREDDLADVLGEYEQEKQQFDDERPVDR-----VEQEAVFEEDTYFDDTLKSLKTGRRSSKMNLSIQDMERVTQELLFQMDKAWAEDQNAISSGRPAFAKIKFVDHALQIMRKQRLQPMLLDFDLLSIIRKWIQPLGDGALPNLGMRTKMISMVHRLPIYKEHLKRSGFGKVIMTLWKHSDETPENKELCREMIDRWSRSVFNKILDYSKL---------AELEAEKAESQSFRRN----------QRPSNPSATGTRTDIFDSQNTSNTE-RAVDEIGTNSHRARLPEQLRFDFIHRPQPKVDLRNVSSKKVDPDSRKGRLLKRMSEIAKPRKKG 427          
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Match: G5AGW9_PHYSP (TFIIS N-terminal domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AGW9_PHYSP)

HSP 1 Score: 150 bits (379), Expect = 1.300e-35
Identity = 106/334 (31.74%), Postives = 175/334 (52.40%), Query Frame = 3
Query:  891 TQDDADFIDDTDDNPDILAEYTHDAPPAGSESEAEEDNGAEMQEEAPVQQSAMDAVLKSMKRRKAQ---ELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASGSTSHGVRRQGGASWGHLKREDPSRDEAVGNILNAKARG-----LDPAG-TRVPYSTGYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKK 1865
            T++D DFID  DD  D+L EY  D      + + E   G E ++    +    D  LKS+K  +++    LS  E EQI QE +Y+++KA  DD  ++ E RPAL K+K +      L K + Q   L+FDLL ++ +W+QP ++G +PN+ +R +ML ++  +PV  +HLKRSG+GK+VM L    +ET ENK + R LV +W+R V+ +   +  +  ++ E    E+          RR+        K +  + D    N+ N ++ G      DP+    +P      F   P+S+V+ +  Q  +    S +++L K+M  ++RP +K
Sbjct:   84 TKEDDDFIDGDDDLADVLGEYDDDR----QQFDDERPLGDEPEQTQQQKDDFFDRTLKSLKTGRSRTKLSLSPQEMEQITQEVLYRMDKAYADDLASIAERRPALEKIKFVDSALHVLRKLQFQPMLLDFDLLTIVKKWIQPLEDGSLPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMLLMKHPQETPENKELCRSLVERWSRAVFNKTLDFSKLAELEAEKAENEMYR--------RRERARKHKKAKNKAHAGDRGA-NVFNGRSGGNNDVKADPSERAELPEQLHIDFLLRPQSKVDMNSVQSKKADPDSRKARLAKRMQEIARPGRK 404          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK3_ECTSI6.730e-11466.44TFIIS N-terminal domain-containing protein n=2 Tax... [more]
A0A835YPY7_9STRA4.930e-4238.15TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A2D4BW91_PYTIN1.150e-3934.02Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A485LKM7_9STRA2.730e-3832.47Aste57867_22366 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZKU1_9STRA4.630e-3831.21TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A067C2C7_SAPPC1.360e-3731.41TFIIS N-terminal domain-containing protein n=3 Tax... [more]
A0A8K1CB40_PYTOL2.950e-3733.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XSN7_9STRA4.020e-3633.61TFIIS N-terminal domain-containing protein n=1 Tax... [more]
F0WGB7_9STRA5.810e-3630.66Uncharacterized protein AlNc14C90G5648 n=1 Tax=Alb... [more]
G5AGW9_PHYSP1.300e-3531.74TFIIS N-terminal domain-containing protein n=11 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:755883..763935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.6
Seed ortholog evalue1.5e-100
Seed eggNOG ortholog2880.D8LRK3
Preferred nameIWS1
KEGG koko:K17498
Hectar predicted targeting categoryother localisation
GOsGO:0000414,GO:0000988,GO:0000989,GO:0000990,GO:0000991,GO:0001076,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007154,GO:0007165,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009741,GO:0009742,GO:0009755,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010793,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016458,GO:0016973,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0030702,GO:0031056,GO:0031060,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031503,GO:0031974,GO:0031981,GO:0032239,GO:0032268,GO:0032386,GO:0032774,GO:0032784,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033157,GO:0033993,GO:0034243,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035065,GO:0040029,GO:0042221,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043933,GO:0043954,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048519,GO:0048523,GO:0048545,GO:0050657,GO:0050658,GO:0050684,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051049,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060303,GO:0060341,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070727,GO:0070827,GO:0070887,GO:0071166,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090087,GO:0090239,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1901700,GO:1901701,GO:1901983,GO:1902275,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2000197,GO:2000756,GO:2001141,GO:2001253
EggNOG free text desc.regulation of histone H3-K36 trimethylation
EggNOG OGsCOG5139@1,KOG1793@2759
Ec32 ortholog descriptionTranscription factor IIS, N-terminal
Ec32 orthologEc-12_000120.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Exons9
Model size2435
Cds size1641
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932376.3295298-UTR-F-serratus_M_contig8:755882..7564431622932376.3295298-UTR-F-serratus_M_contig8:755882..756443Fucus serratus maleUTRF-serratus_M_contig8 755883..756443 -
1690964278.0361633-UTR-F-serratus_M_contig8:755882..7564431690964278.0361633-UTR-F-serratus_M_contig8:755882..756443Fucus serratus maleUTRF-serratus_M_contig8 755883..756443 -
1622932376.5637715-UTR-F-serratus_M_contig8:762802..7628991622932376.5637715-UTR-F-serratus_M_contig8:762802..762899Fucus serratus maleUTRF-serratus_M_contig8 762803..762899 -
1690964278.1500144-UTR-F-serratus_M_contig8:762802..7628991690964278.1500144-UTR-F-serratus_M_contig8:762802..762899Fucus serratus maleUTRF-serratus_M_contig8 762803..762899 -
1622932376.5781507-UTR-F-serratus_M_contig8:763799..7639351622932376.5781507-UTR-F-serratus_M_contig8:763799..763935Fucus serratus maleUTRF-serratus_M_contig8 763800..763935 -
1690964278.160608-UTR-F-serratus_M_contig8:763799..7639351690964278.160608-UTR-F-serratus_M_contig8:763799..763935Fucus serratus maleUTRF-serratus_M_contig8 763800..763935 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932376.35159-CDS-F-serratus_M_contig8:756443..7565181622932376.35159-CDS-F-serratus_M_contig8:756443..756518Fucus serratus maleCDSF-serratus_M_contig8 756444..756518 -
1690964278.058181-CDS-F-serratus_M_contig8:756443..7565181690964278.058181-CDS-F-serratus_M_contig8:756443..756518Fucus serratus maleCDSF-serratus_M_contig8 756444..756518 -
1622932376.3949618-CDS-F-serratus_M_contig8:756746..7568521622932376.3949618-CDS-F-serratus_M_contig8:756746..756852Fucus serratus maleCDSF-serratus_M_contig8 756747..756852 -
1690964278.0719771-CDS-F-serratus_M_contig8:756746..7568521690964278.0719771-CDS-F-serratus_M_contig8:756746..756852Fucus serratus maleCDSF-serratus_M_contig8 756747..756852 -
1622932376.4191275-CDS-F-serratus_M_contig8:757285..7575331622932376.4191275-CDS-F-serratus_M_contig8:757285..757533Fucus serratus maleCDSF-serratus_M_contig8 757286..757533 -
1690964278.0819798-CDS-F-serratus_M_contig8:757285..7575331690964278.0819798-CDS-F-serratus_M_contig8:757285..757533Fucus serratus maleCDSF-serratus_M_contig8 757286..757533 -
1622932376.4389431-CDS-F-serratus_M_contig8:757703..7578441622932376.4389431-CDS-F-serratus_M_contig8:757703..757844Fucus serratus maleCDSF-serratus_M_contig8 757704..757844 -
1690964278.0910642-CDS-F-serratus_M_contig8:757703..7578441690964278.0910642-CDS-F-serratus_M_contig8:757703..757844Fucus serratus maleCDSF-serratus_M_contig8 757704..757844 -
1622932376.4658477-CDS-F-serratus_M_contig8:758352..7584391622932376.4658477-CDS-F-serratus_M_contig8:758352..758439Fucus serratus maleCDSF-serratus_M_contig8 758353..758439 -
1690964278.1069174-CDS-F-serratus_M_contig8:758352..7584391690964278.1069174-CDS-F-serratus_M_contig8:758352..758439Fucus serratus maleCDSF-serratus_M_contig8 758353..758439 -
1622932376.485204-CDS-F-serratus_M_contig8:758657..7588191622932376.485204-CDS-F-serratus_M_contig8:758657..758819Fucus serratus maleCDSF-serratus_M_contig8 758658..758819 -
1690964278.120733-CDS-F-serratus_M_contig8:758657..7588191690964278.120733-CDS-F-serratus_M_contig8:758657..758819Fucus serratus maleCDSF-serratus_M_contig8 758658..758819 -
1622932376.5132785-CDS-F-serratus_M_contig8:759060..7591921622932376.5132785-CDS-F-serratus_M_contig8:759060..759192Fucus serratus maleCDSF-serratus_M_contig8 759061..759192 -
1690964278.1304073-CDS-F-serratus_M_contig8:759060..7591921690964278.1304073-CDS-F-serratus_M_contig8:759060..759192Fucus serratus maleCDSF-serratus_M_contig8 759061..759192 -
1622932376.5369763-CDS-F-serratus_M_contig8:762112..7628021622932376.5369763-CDS-F-serratus_M_contig8:762112..762802Fucus serratus maleCDSF-serratus_M_contig8 762113..762802 -
1690964278.1399007-CDS-F-serratus_M_contig8:762112..7628021690964278.1399007-CDS-F-serratus_M_contig8:762112..762802Fucus serratus maleCDSF-serratus_M_contig8 762113..762802 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19315.1prot_F-serratus_M_contig8.19315.1Fucus serratus malepolypeptideF-serratus_M_contig8 756444..762802 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8.19315.1

>prot_F-serratus_M_contig8.19315.1 ID=prot_F-serratus_M_contig8.19315.1|Name=mRNA_F-serratus_M_contig8.19315.1|organism=Fucus serratus male|type=polypeptide|length=547bp
MSEIDDMFGSDSSGDERQAKETVPDDAGDLFGSDSDSGLNDPTPQDTNAV
VDSSSQVNAGDDGDADVDPFADSDDEPGAGSISGKSLGRLQKGAGGVEEG
TGAGKKPELAVEGKASKGKKKKKDKLKKKKGKKRKRLSAGTDGGEEEQQT
QTVKKKKKKKKKKKETEKGVDPENAQQLEDLGLLSSGDDHEEEEEEEADL
EPVEPVREEEAEAVDKEARTQDDADFIDDTDDNPDILAEYTHDAPPAGSE
SEAEEDNGAEMQEEAPVQQSAMDAVLKSMKRRKAQELSTAEREQIAQEFI
YKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLG
VIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLF
NSKEETRENKNVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVSASG
STSHGVRRQGGASWGHLKREDPSRDEAVGNILNAKARGLDPAGTRVPYST
GYAFAKAPRSRVESHGRQPGQQVDTSARSKLLKKMAHLSRPVKKGA*
back to top

mRNA from alignment at F-serratus_M_contig8:755883..763935-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8.19315.1 ID=mRNA_F-serratus_M_contig8.19315.1|Name=mRNA_F-serratus_M_contig8.19315.1|organism=Fucus serratus male|type=mRNA|length=8053bp|location=Sequence derived from alignment at F-serratus_M_contig8:755883..763935- (Fucus serratus male)
GAAGGGTTAAGAGGCACAAGAAGGACAGCAGTCGGGGGAGCTTACGCCCT GCCTCGGTTAGCTGCGAAGACGCCTCCGACAACGATGGGAAGGAACATTG CCGATTTTTCTGTGTTCCCCCGGGGTTAACTCAAAGGTAGGGGGGGATTG GTCCGTCCTACGATTTCAAGTCAGTATAACAAAGTCACCCGTTCGAGTAG TACCTACAAAACAGTGTCGTATACTATAGAGCTTTCCCTGTTTTACGGTA CTAAAGAGTTCCGGTGTACAACGGGTGGTAAGAGGCTACCGATACAGACC GTAGAATTGATTTGAACACCAGTTGTGGGTGCGCACAAGTACCAAGCAAA ACTCCCCTGTGCTTGTGCCTAAACAACTAGTGCGACACCAGTTCGCTCAT GAATCGGCATTGGCCATTACGAACGAAAGACAGGAAACTTTGTGGTCCAA TATGATAATATCAAACTCGCTCGGACCGCTGTTGCAGGGAGAGCATCTGG TGGAAATAACAGCGCTCAAGTACGAAGCTAAACCCACCTGTCCTTGTGCC CGAACAACGAGTGCGACACCGGCTCGCTCATGAATTGGCACTGTCCATTA CGAACGAAAGAGAGGAGACTTTGCGGTCGAAGAGGATGATTCAACTCGCT CGAACCAATGTTGCTGGGAAAGCATCTGGGTGGAAAGAACAAGCTTGATA TCCGCAAAGTACAACAACCACACCGCTTGCTCGACGAGTCCCTGTTTTTG CCGTTTTCGTTCACCTCGATCAATGCTCCTGGGTTGAAGCCCAATGGTCG CGCCAAGTCTTTAGTGCCCTCTCCCGGTCCCTGATTCAAGTCGAATCGCC ACATTCGTGCAGGAGACATCTTGGTCAACAGCAGCCAATTTTTTCTAAAC CCGATTTTCCACACAGCCACGACAATACGCGCCCAGAACACACACCTCAG AGATTATAGGGGCCATATATAATGAAGGCCCATAAAGACTTCGCCTTCAT ATCTCGTGAAGTCCAATCATCAACAATCAAATCCAGGCTGGCTGCGTGGA CTATCGATCGAGGGAGAGGAAAGGCTATCGACAAGAGCTAGAGCTTCGAA ACAGCCGAAACCGACCCATCTCCTTCTATCATCATGTCCGAAATTGATGA CATGTTCGGTTCCGACTCATCCGGAGATGAAAGGCAAGCCAAAGAGACGG TGCCCGACGACGCTGGCGATCTCTTCGGGAGTGACTCGGACTCTGGGCTG AACGACCCAACCCCGCAAGACACCAATGCCGTCGTTGACTCAAGTTCCCA AGTCAATGCCGGCGATGACGGGGACGCTGACGTCGACCCTTTCGCGGATA GTGACGACGAGCCCGGCGCTGGATCTATCAGTGGTAAAAGTCTAGGGCGG TTGCAGAAGGGGGCGGGTGGGGTGGAGGAAGGGACAGGCGCAGGGAAGAA GCCCGAACTGGCGGTTGAGGGCAAAGCATCAAAGGGCAAAAAGAAAAAGA AAGATAAGCTCAAGAAGAAAAAGGGTAAGAAGCGGAAACGGCTTTCCGCG GGCACCGACGGTGGAGAGGAAGAGCAGCAGACGCAGACGGTAAAAAAGAA GAAGAAGAAGAAGAAGAAGAAGAAGGAAACTGAGAAGGGGGTTGACCCGG AGAACGCGCAGCAGCTGGAGGATCTGGGCTTGCTTTCATCGGGGGATGAT CATGAGGAGGAGGAGGAGGAGGAAGCCGATCTCGAGCCCGTGGAGCCTGT GCGAGAAGAGGAGGCGGAAGCGGTAGATAAAGAGGCCCGCACGCAAGACG ACGCCGACTTCATCGACGACACGGTGAGTTCTCCTGTTAAGTGAGCAGTG TATCGAACAGCATTCTCTGTATGCATAGCTTGTAATTCAAATCCTGGATT ATTGGCAGAGCTCCAGACAGAGTATAGATGTACGCCGATAAATGTATTTA CAGTATTAGATTACCCGTAAACTGCGCAATCCGGCCCTTGCTCGTTTTTA GAGAAAAATCTAAACGCATCTAAACCTTCTGAGCACCGAGAGCATCCCCC AGATCCCCCAGCCCCAGGAGGGAAAATCGTCACAAGTGCTTAGGTGGGAA CATAGGCTGCCAAGACAAATCTCTTCATGGCATTTAATTGGGTTCTCCAA TGGTAGTAACATAGGGTCAACAAGATAATGTCGGGGAGAAACACACCGTT ATACTGTACGCTTCCATTAATCGCTACTGGTATATAACATGCGGGGACAC CAAAGCAGACGAAATACATGATGAGCCTCTGGGTAGATACAGCTTAACTT CGTTACATTGGGTATAGGATCGGATGGGTTTCAGCACTACAGGCATAAGT ACACGACTGCCACAGTATTATCTCGACTGTAGGTACCACAGTATTCTATG ATCTCTGTTAAATCTCTGTGAAAGTGAAACAGAGAAGGTACATGATACGC CTTCCATTCATCTATATACATTTCAACATGCCCACTTCATACCAATAGTG GGTGTGGGAAAGAGAGGCGTAGATTAATTGGTCCATGGTGACCTGCTAAG GCAGCACTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGCGCCGGCGG ACTCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAACT CGGGACTTACCCGATGGCGTATGACGGTTTAATATAAATATATGGACGCC GCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACTAGATTCAGCCTGA GTATGGAGATGAGCAGGCTGACGCGGGACGGTACTGCCGAAACCGTCTCG CGAGACCAAATTCTCAGGCACGAACGCGGATAGGGGAATATTTTATTCCC TGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCAGGTTGATACATA CTCTTGCTATATGTGTGACCATACATGATGACAGGAGTATCCAACTGTGA AGTGGAAGGGGCAAAATGAGTACTGTATACAATCATTATTTTCACTGTTA TGTTGTATTTACAGAGGTTTTAACAGCAGGCAGAGGTTACTATTAAATAT TAATATACTGTTTTGTAGAGTCTCGAGGAAGGTTAGAGGATGAGAGGGCA AAGAGTACCACCACTCAAGTTTTGAAACACAATCCAGTAAGTACCAGAGA CTGTTATTCACCTGGAAGTAGACGAAGAGCATCATCAGTGGAAGGCCACA ACGGAGGATTTCATTTATAGCCATTCTATCCCACAGTGCTGAACTTGTAT CGCGATAGAAAATCGTAAGGAGGCGAGAACCGGGGAGAGATTGGAAGATC CGTCGTGACCACAGGCATTAACAGGATGACAACGTTGCAGAAGGTGGGAT TGGTGACCTTGCATGTTGAGGTCCATCGGCCGTTAGTGAAATACAAACAA ATAAACAAGAAAATCGCATCCCCCCAGTGGGGAATGAAATATTTAATATT TTAAAAGAAAAATTTAAACGCATCTAAACCTACTTGTTGCGTCAAAGGAG AAATAAACCTAAATATATCTACTGCCCCTCTGGAACAATATCGGGGAACC CGTTGAAACGCCATGAGAAGAGATTTTGTATTTGCAGCCTTTGATCCCAC CCAAACGTTATGACATATTTTCCCCCTGAATGGGGGATGCTCTGAAGGTC TAGGCGCGTTCTGATTTTTGCATTAAACAATAACCCCCCCATGCTCCAAA ACTCCTGTCACAGGTGCTCACATCTACTCCGTAACAGTATACTCCAGTAT ACTGTAGAGCTGCAGCAGTAGTAAGAGCAGTACACGTTACTTTCAACATG CCCACTTCATACCAATAGTGGATGTGGGAAAGAGAGGCGTATATTAGTTG GTCCATGGTGACCTGCTAAGACAGCACTCGTTCGGAACTACCTTGAGGTT TACTGGCCCTGTGCCGACGGACTCTCGGCAGTGAACGCCATCGGTACGCA ATTGCGTGACCCGATAAACTCGGGACTTACCCGATGGCGTATGGCGGTTT AATATAAATATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGT AAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGACTGACGCGGGACG GGACTGCCGAAACCGTCTCGCGAGACCAAATTCTCAGGCACGAACGCGGA CAGGGGAATATTCTTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAA CCTTACCAGGTTGATCCATACTCTTGCTATATGTGTGACCATACATGTTG CCTATGCACAACGGCTGTAAGTAACTGAATTGTGTCGTCGTTGTAGCTCT GGAACCATACCTCAAGCATCGAAATACATGACGTGGAACATAAAAACTGC GAATCCTACTCTCTGTTAAAAGCACCTTCAGTATGAGTATAACTATTTCG TGCGTAGTACATGGCTGTTCATACACGACGTAGTAACTAATAGTTCTATG AGTATCCTTGACAAAACGGTGTTCAGGGCCCGGTGACCTGAGTGAAAGTG AAATTCGCCTTTTTGCTGCTTGGCAGAATCAAAGTGTAAGTGTTTACTGT AATAAGTACTGTTACAACTGGCGTAGTTCTGCAGCAAGGCAAAAAGCCTT TGGTACAAGATATAAGTGGTTCGGGACCGCTCTCGAAGTATGTTTATACA GTATAGACTGCAGTAGAAACATGTCTTAGACGAAAAGCTGTGACTCTTGC GGCATCGACGTGTGCGCGATAACTGCTGTATACATGGTGGCAGGATGACA ACCCCGACATCCTGGCGGAATACACGCACGACGCGCCCCCGGCGGGGAGT GAAAGCGAGGCCGAGGAAGATAACGGCGCGGAAATGCAGGAGGAAGCCCC TGTTCAGCAGAGCGCCATGGACGCGGTGAGGCTTGACTGTCATCACCAAT GTGTTTCATGGGCTTTATATTTAGGGGAGGAAGACGCGATTTGCTACGCT TCGAGTGATTGGTGCCTGCTCTTCGCGACCTCGAGCCATCACTATTAAAA TAACAGTTGTGTAAGTTGGACTCCGGTGCGGGAAATTCCTCGCCATACTG TTACGTCACAAACGGCGCGTGGCCCGCATGATGGTGGAAAGCACTTGACC AAACCTTGAACACCAGGTCTTGAAGTCGATGAAGCGGCGTAAAGCCCAGG AGCTGAGTACCGCTGAGCGTGAGCAAATCGCACAAGAGTTCATTTACAAA ATCAACAAGGCCTCGGAAGACGACGAAAAGGCCGTTAAGGAGGGAAGGCC TGCGCTTAACAAGCTCAAGATGCTTAAGGTTGTACCCCCGCGGGATAGGT AAAACGTTACTTACTCTGTCTAGTCCCTAGATGGCTGTTTGATTGTTGTA AATTGGGGAAAACATATGCTCACGTAACGATGAGGTAGCTGTGCTCGTCC CCATCGAAAACACCCTTCTCACGTGGCAGCTGCCGTAGTCTCTATCCCAT CATAATAGTGGCTGCTAACGTGTAATGGCCCTCCCATTGGTTTCAGGTGG TCAAGGCAACTCTAGCCAAGAAGGAGTTGCAAGAAACGTTCCTGGAGTTC GACTTGCTCGGCGTTATCGCGCGCTGGCTCCAGGTGAAAGCCTCACCCAA AACTGCGTGTGTACCGTTTTCAGCAATGTAAGACGAAAAAGTCTGCATGC ATGCCAGGCATTCTTCGTGACCCAAGAGGGTAAGGGATCGGGACGTTTCC TTGCCGTACGCACTATTCTATTTCCACCACGATAGGCCCTCTAATCCTTC ATGACTTGTCAGTGGTGAGTTGTTGATCGTTACCAAGAGCCGAGAGGTAG TTCAGGGGGTCGGCGAACTTCGGAAGGCGGAAAGCACCCGCCGATGAAAG AGTGACGAGGGGGTAGAAACGAAACAAGGCGTAGTGTAGTCTGGTGTAGT CATGGATTTGGGCTAATAGTACTCACGATTCGTTTATCAAGAAAACGGAG GGCTAGCCTCTCCACATTAGTTCGTGTCCGGACATCAAGTAACCTGCTCT ATGTTGCAGTCGCGTCAACGCTCAGACCTTCCGCCCTCTGTCCTCGTACC CCCGCCGCTGGCTGTCGTCGATCTGGGTGTGCCCTGCACAGCCGTACAAG AACGGCAGGATTCCTAACCTCACGATTCGGAAAGAGATGCTGGCTCTCTT GTTAATGTTGCCAGTCCAAGTCGATCATCTCAAGAGGAGTGGTATCGGGA AGATTGTGATGGGCTTGTTCAACTCCAAAGAGGTGGGCCGGCTTTGCTCC AAAGTCTACGCGCGCCAAGAATGGCACATGCCCCTTTGGCGAGTTTAAAT GTTAGGTACGAAGTACATAGGAGCTTCCTCTCGCGGGCTTGGGGACGAGC CTCCGGTACGCCTCGACCTGCGCGTTTCCCGCCGCTTGTTCTCGCGTCAC AGGAAACACGGGAGAACAAGAACGTTATTCGCGAGCTGGTGAGTAAGTGG AACCGACCCGTGTACGGACAGGACGCGAGCTATCGGGCCATGAGGTCCAT GAAAGAAGAACCAGAAGCGATTGAGGTGTCGGCATCGGGAAGCACGAGCC ATGGCGTCAGACGACAAGGGGGAGCGTCGTGGGGCCACCTTAAGCGCGAG GATCCGAGCCGGGATGAGGCTGTTGGGAACATCCTCAACGCCAAAGCGAG GTGATGATTTCGACGAAGCACGAGTATGACGTGATGTGCGGCAGTGGCTG GCAAAAGCGGTGATGTGAAAGCGCCCTTGGATCACGCCCGCCTTTGACGT TAGTATACGTGTATCTTTTGCATGCTGCTGATTGTATGGTCACAGATACC TATAGATTATACTGGTACGAATTGCGCGTGAATACTTTTTGGTAGTAAGT TTCGAGATCGGTCGGATCTGGAGTTAGACGGATTAAAGCGGGGACTTCTT TTGACGTCTGTGTCATTTTATGCTTGAGCCGTTAGTCTTTAGTGTCGAGT TTTGCGGACACATCTTCTTCGATTGAAAATTGTTTTATTACCTACAGTAT CTACCAGGGTCCAATCTGGTTATGCGTCTTCTCCACATCCACGGACGTCG CTTGTATCTAACGTAATCTAACGTAACGTAAAGGGGACTCGATCCTGCGG GGACGCGCGTGCCCTACTCGACGGGGTACGCTTTCGCGAAGGCTCCAAGG TCAAGGGTTGAGAGTCACGGCCGTCAACCGGGTCAGCAGGTGGGTGTCTT CCCCGACGCTCGTTCCTGGACTACGTGCCCGGGTTTGTTTTACGTTTTTG AGAGCTTCATCGCTTTTTCAGGCAAAAAACAAAAGTAGAAAAAAAAAAGG TTAAATGCTACAAGAAGGGCACGGACGATATCACCACTCATGAGCGATTG CTTACTTTTTTACAATAATCTCCGTTTGTTTGTTCAACGCCTAATCCATC CCCGCCGCCTATCGAAGGTGGACACGTCTGCTCGTTCGAAACTGCTCAAG AAGATGGCCCACCTTTCGCGTCCCGTCAAGAAGGGCGCATGACGGGGAAA GTGCAAGTACGCGCTCAGCGCGTGCTGGCATAAAGTCAAAGGGATCGCAA TTTGTTCGGAGCGTCTGTGTTGCGGTGGTGGAATGTGATCGTGGGATGCG CCGGTTCCGTTTCAGCCCGATGAGTCTGAAAATAGGTCTTCTGCGTCCAC CGGGCGGAGTTGCTCTTCCTAGCCGGGTTCTCTACCTTGAGCTTCAACTT CAAGTTGTAACGGCAGAAATCGCTCTGTAGTGTTCTCAGTATATTCTTTT GTGTTCTTGTATGGTAGGCAAACCGCATGTCAGCAGAGATTATTGTACGC GACGCGAGGATCAGTAACGTACGAATCAGAGGAGAGTGAGCTTCAACCTT CTGCAGCGGCGTGTTTTCGTCGGCCCCTGCAAGATCTGCTCAAATGCACC TCCTGTCGTTCATTTTTTACTGGTCCAGCTAGGTTTTGTAAAGCAGAGCG AGAGGTGAACTGTACTCAGCGCGCAACGCACAGCATAGGTGAAAACATTT TGAGACGTTCATCCACAAGCAAGTGTTTTACTCCAGCGTATTTTTCGCGC CCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig8:755883..763935-

>mRNA_F-serratus_M_contig8.19315.1 ID=mRNA_F-serratus_M_contig8.19315.1|Name=mRNA_F-serratus_M_contig8.19315.1|organism=Fucus serratus male|type=CDS|length=3282bp|location=Sequence derived from alignment at F-serratus_M_contig8:755883..763935- (Fucus serratus male)
ATGTCCGAAATTGATGACATGTTCGGTTCCGACTCATCCGGAGATGAAAG
GCAAGCCAAAGAGACGGTGCCCGACGACGCTGGCGATCTCTTCGGGAGTG
ACTCGGACTCTGGGCTGAACGACCCAACCCCGCAAGACACCAATGCCGTC
GTTGACTCAAGTTCCCAAGTCAATGCCGGCGATGACGGGGACGCTGACGT
CGACCCTTTCGCGGATAGTGACGACGAGCCCGGCGCTGGATCTATCAGTG
GTAAAAGTCTAGGGCGGTTGCAGAAGGGGGCGGGTGGGGTGGAGGAAGGG
ACAGGCGCAGGGAAGAAGCCCGAACTGGCGGTTGAGGGCAAAGCATCAAA
GGGCAAAAAGAAAAAGAAAGATAAGCTCAAGAAGAAAAAGGGTAAGAAGC
GGAAACGGCTTTCCGCGGGCACCGACGGTGGAGAGGAAGAGCAGCAGACG
CAGACGGTAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAACTGA
GAAGGGGGTTGACCCGGAGAACGCGCAGCAGCTGGAGGATCTGGGCTTGC
TTTCATCGGGGGATGATCATGAGGAGGAGGAGGAGGAGGAAGCCGATCTC
GAGCCCGTGGAGCCTGTGCGAGAAGAGGAGGCGGAAGCGGTAGATAAAGA
GGCCCGCACGCAAGACGACGCCGACTTCATCGACGACACGATGTCCGAAA
TTGATGACATGTTCGGTTCCGACTCATCCGGAGATGAAAGGCAAGCCAAA
GAGACGGTGCCCGACGACGCTGGCGATCTCTTCGGGAGTGACTCGGACTC
TGGGCTGAACGACCCAACCCCGCAAGACACCAATGCCGTCGTTGACTCAA
GTTCCCAAGTCAATGCCGGCGATGACGGGGACGCTGACGTCGACCCTTTC
GCGGATAGTGACGACGAGCCCGGCGCTGGATCTATCAGTGGTAAAAGTCT
AGGGCGGTTGCAGAAGGGGGCGGGTGGGGTGGAGGAAGGGACAGGCGCAG
GGAAGAAGCCCGAACTGGCGGTTGAGGGCAAAGCATCAAAGGGCAAAAAG
AAAAAGAAAGATAAGCTCAAGAAGAAAAAGGGTAAGAAGCGGAAACGGCT
TTCCGCGGGCACCGACGGTGGAGAGGAAGAGCAGCAGACGCAGACGGTAA
AAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAACTGAGAAGGGGGTT
GACCCGGAGAACGCGCAGCAGCTGGAGGATCTGGGCTTGCTTTCATCGGG
GGATGATCATGAGGAGGAGGAGGAGGAGGAAGCCGATCTCGAGCCCGTGG
AGCCTGTGCGAGAAGAGGAGGCGGAAGCGGTAGATAAAGAGGCCCGCACG
CAAGACGACGCCGACTTCATCGACGACACGGATGACAACCCCGACATCCT
GGCGGAATACACGCACGACGCGCCCCCGGCGGGGAGTGAAAGCGAGGCCG
AGGAAGATAACGGCGCGGAAATGCAGGAGGAAGCCCCTGTTCAGCAGAGC
GCCATGGACGCGGATGACAACCCCGACATCCTGGCGGAATACACGCACGA
CGCGCCCCCGGCGGGGAGTGAAAGCGAGGCCGAGGAAGATAACGGCGCGG
AAATGCAGGAGGAAGCCCCTGTTCAGCAGAGCGCCATGGACGCGGTCTTG
AAGTCGATGAAGCGGCGTAAAGCCCAGGAGCTGAGTACCGCTGAGCGTGA
GCAAATCGCACAAGAGTTCATTTACAAAATCAACAAGGCCTCGGAAGACG
ACGAAAAGGCCGTTAAGGAGGGAAGGCCTGCGCTTAACAAGCTCAAGATG
CTTAAGGTCTTGAAGTCGATGAAGCGGCGTAAAGCCCAGGAGCTGAGTAC
CGCTGAGCGTGAGCAAATCGCACAAGAGTTCATTTACAAAATCAACAAGG
CCTCGGAAGACGACGAAAAGGCCGTTAAGGAGGGAAGGCCTGCGCTTAAC
AAGCTCAAGATGCTTAAGGTGGTCAAGGCAACTCTAGCCAAGAAGGAGTT
GCAAGAAACGTTCCTGGAGTTCGACTTGCTCGGCGTTATCGCGCGCTGGC
TCCAGGTGGTCAAGGCAACTCTAGCCAAGAAGGAGTTGCAAGAAACGTTC
CTGGAGTTCGACTTGCTCGGCGTTATCGCGCGCTGGCTCCAGCCGTACAA
GAACGGCAGGATTCCTAACCTCACGATTCGGAAAGAGATGCTGGCTCTCT
TGTTAATGTTGCCAGTCCAAGTCGATCATCTCAAGAGGAGTGGTATCGGG
AAGATTGTGATGGGCTTGTTCAACTCCAAAGAGCCGTACAAGAACGGCAG
GATTCCTAACCTCACGATTCGGAAAGAGATGCTGGCTCTCTTGTTAATGT
TGCCAGTCCAAGTCGATCATCTCAAGAGGAGTGGTATCGGGAAGATTGTG
ATGGGCTTGTTCAACTCCAAAGAGGAAACACGGGAGAACAAGAACGTTAT
TCGCGAGCTGGTGAGTAAGTGGAACCGACCCGTGTACGGACAGGACGCGA
GCTATCGGGCCATGAGGTCCATGAAAGAAGAACCAGAAGCGATTGAGGTG
TCGGCATCGGGAAGCACGAGCCATGGCGTCAGACGACAAGGGGGAGCGTC
GTGGGGCCACCTTAAGCGCGAGGATCCGAGCCGGGATGAGGCTGTTGGGA
ACATCCTCAACGCCAAAGCGAGGAAACACGGGAGAACAAGAACGTTATTC
GCGAGCTGGTGAGTAAGTGGAACCGACCCGTGTACGGACAGGACGCGAGC
TATCGGGCCATGAGGTCCATGAAAGAAGAACCAGAAGCGATTGAGGTGTC
GGCATCGGGAAGCACGAGCCATGGCGTCAGACGACAAGGGGGAGCGTCGT
GGGGCCACCTTAAGCGCGAGGATCCGAGCCGGGATGAGGCTGTTGGGAAC
ATCCTCAACGCCAAAGCGAGGGGACTCGATCCTGCGGGGACGCGCGTGCC
CTACTCGACGGGGTACGCTTTCGCGAAGGCTCCAAGGTCAAGGGTTGAGA
GTCACGGCCGTCAACCGGGTCAGCAGGGGACTCGATCCTGCGGGGACGCG
CGTGCCCTACTCGACGGGGTACGCTTTCGCGAAGGCTCCAAGGTCAAGGG
TTGAGAGTCACGGCCGTCAACCGGGTCAGCAGGTGGACACGTCTGCTCGT
TCGAAACTGCTCAAGAAGATGGCCCACCTTTCGCGTCCCGTCAAGAAGGG
CGCATGAGTGGACACGTCTGCTCGTTCGAAACTGCTCAAGAAGATGGCCC
ACCTTTCGCGTCCCGTCAAGAAGGGCGCATGA
back to top