mRNA_F-serratus_M_contig8.19309.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: D8LRL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL4_ECTSI) HSP 1 Score: 325 bits (833), Expect = 8.860e-105 Identity = 193/370 (52.16%), Postives = 224/370 (60.54%), Query Frame = 1
Query: 22 QSIVGLISMFKFNFYP------------SNAADEDQPTLCPDSGPKNVPASAHTARQL--------DPKASIDAEIAATAAGAQ-VAWRRGDSTLLRTVPTSRACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDAS--HFTRRRKQVLELGCGHGLPGIMALRQGFQVCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSPLLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHALVASKRFYFGTGGSTQYFRE---------QATLDGRLACVDVSILNDGKSNIREVLRVSWME 1035
S V + MFKF FYP S A+ED PD + AR++ +A +A AT+ AQ VAW+ D TLLR VP+++ACP +P ESDLV G+YEGGLKVWEASLDLVE+L ++S P D G +G DAS T R K VLELGCGHG PGI+AL+QG +VCFSDFN EVIEQVT+PNVRLNV W LAEYYSGDW+SLSPLL+ERDGGG FDLILTAETLYTT VADK+L+M+ RHL G ALVASKRFYFGTGGSTQYFRE A RL C DV++++ GK NIREVLRVSW E
Sbjct: 27 SSRVQRVIMFKFGFYPPSSNXXXXXEQLSAVANEDTAVTDPDQ---------YAARRIRHVGDGGATTRADGEAGTTATSQPAQAVAWKSEDLTLLRVVPSAKACPGVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNS-------------------------------SSCPVGLDGG----SGGDASVGSGTGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERDGGGLFDLILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFREVIAARRCSAAAEASRRLVCSDVAVIDTGKGNIREVLRVSWEE 352
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: A0A6H5JBA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA0_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.030e-95 Identity = 182/364 (50.00%), Postives = 213/364 (58.52%), Query Frame = 1
Query: 46 MFKFNFYP------------SNAADEDQPTLCPDSGPKNVPASAHTARQLDPKASIDAEIAATAAGAQVA----------WRRGDSTLLRT---VPTSRACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGFQVCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSPLLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHALVASKRFYFGTGGSTQYFRE-------QATLDG--RLACVDVSILNDGKSNIREVLRVSWME 1035
MFKF FYP S A+ED PD +TAR++ + AE+ A+ A WR G T L + + + CP +P ESDLV G+YEGGLKVWEASLDLVE+L ++S GL G S + G V T R K VLELGCGHG PGI+AL+QG +VCFSDFN EVIEQVT+PNVRLNV W LAEYYSGDW+SLSPLL+ERDGGG FDLILTAETLYTT VADK+L+M+ RHL G ALVASKRFYFGTGGSTQYFRE A ++ RL C D ++++ GK NIREVLRVSW E
Sbjct: 1 MFKFGFYPPSXXXXXXXXXXSAVANEDTAVTNPDQ---------YTARRIRHRGDGGAEVQQQGLKAKQAKQQLPSRHKLWRGGLRTSLSSASFLQRTATCPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSSPMGL------DGGSGEDGSV---------------------------GSGTGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERDGGGLFDLILTAETLYTTAVADKVLDMVGRHLAPGGQALVASKRFYFGTGGSTQYFREAIAARCNSAAVEASRRLVCSDAAVIDTGKGNIREVLRVSWEE 322
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: T0R0A7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R0A7_SAPDV) HSP 1 Score: 174 bits (441), Expect = 9.630e-48 Identity = 123/329 (37.39%), Postives = 160/329 (48.63%), Query Frame = 1
Query: 46 MFKFNFYPSNAADEDQPTLCPDSGPKNVPASAHTARQLDPKASIDAEIAATAAGAQVAWRRGDSTLLRTVPTSRACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGFQ-VCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSPLLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHALVASKRFYFGTGGSTQYFREQATLDGRLACVDVSILNDGKSNIREVLRVSW 1029
MF+FNF + A P P + PA HT L + D + T GA +A L V + A + DL GVYEGG K+WE S+DL+EYL + H G LR V+ELGCGHGLPGI AL+QG V FSD+NSEVIE T+PN DR A +YSGDW ++S + + +DL+LTAETLYT DV +L MI RHL R G ALVA+K +YFGTGGS +F++ +G + V ND +SNIRE+++V++
Sbjct: 1 MFRFNFDETAEATSAAPAPPPIA---KRPAKLHTESSL--QVCDDYFMPVTVGGADLAVVNQQHPLF--VQNTGALQKLLTTHDLETGVYEGGFKLWECSIDLIEYL---------------QQHQADFPIGACGLR---------------------------------VMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPNTMRCAGDRLHH-ASFYSGDWANVSEAMAANEDAS-YDLVLTAETLYTEDVTISLLAMIKRHLKRSGVALVAAKTYYFGTGGSVHHFKDLVAREGDMVATTVWNGNDCRSNIREIVQVTY 272
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: A0A7S3HG77_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG77_9STRA) HSP 1 Score: 169 bits (429), Expect = 6.030e-46 Identity = 110/268 (41.04%), Postives = 139/268 (51.87%), Query Frame = 1
Query: 229 GDSTLLRTVPTSRACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGF-QVCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSP-LLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHALVASKRFYFGTGGSTQYFREQATLDGRLACVDVSILNDGKSNIREVLRVS 1026
G++ LL V S+ A+ E+D++ GVYEGG KVWE S+DL L ++A T P+L R +ELGCGHG PG+ AL+ G +V FSD N+EVI VT PN+ LN RD + AE YSGDW+ LS +L G+FDLIL+AETLYT +KIL MILRHL G AL+ASKRFYFG GG T G L + DG SNIRE++R++
Sbjct: 58 GNAELLMVV-VSQDESALDKETDIIPGVYEGGYKVWECSVDLTAMLL----------------------------------QKACTLPELSTCR---------------AIELGCGHGFPGVAALKLGCPRVVFSDLNAEVINAVTWPNIFLNARD-IMNRAECYSGDWDELSSTVLSRGSDDGKFDLILSAETLYTEASCNKILSMILRHLSNTGVALIASKRFYFGVGGGTYTLETLVQACGVLNYHVEQVYQDGASNIREIVRLT 274
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: A0A835Z957_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z957_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.890e-45 Identity = 105/279 (37.63%), Postives = 135/279 (48.39%), Query Frame = 1
Query: 280 IPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGFQVCFSDFNSEVIEQVTVPNVRLNVRDRF-----------------------------WDLAEYYSGDWNSLSPLLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHALVASKRFYFGTGGSTQYFREQATLDGRLACVDVSILNDGKSNIREVLRVSW 1029
+ E+DLV GVYEGGLKVWE S+DL+EY+ E++G G K+V+ELGCGHGLPG+ ALRQG V F+D+N EV+E T+PNVR N + A +Y GDW L +L + DG RFDLILTAETLYT +I +I L GHALVA+KR+YFG GGS +F++ +AC +++ G +NIREVL VSW
Sbjct: 62 VDEETDLVPGVYEGGLKVWECSVDLIEYML-----------DRPEVYGPEKMAG------------------------------------KRVIELGCGHGLPGVYALRQGAHVVFTDYNREVLEHATIPNVRANCPEALPSSLSIDTSGGRGGGMSAGQGSAQGVVNAGGRAAFYFGDWGGLPEMLAD-DGEERFDLILTAETLYTATATVQIHRLIETLLAPGGHALVAAKRYYFGCGGSCAHFKQLVAPP--MACETACVIDTGVANIREVLLVSW 290
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: A0A1V9YGQ4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGQ4_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.170e-45 Identity = 119/330 (36.06%), Postives = 162/330 (49.09%), Query Frame = 1
Query: 46 MFKFNFYPSNAADEDQPTLCPDSGPKNVPASAHTARQLDPKASIDAEIAATAAGAQVAW-RRGDSTLLRTVPTSRACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGF-QVCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSPLLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHALVASKRFYFGTGGSTQYFREQATLDGRLACVDVSILNDGKSNIREVLRVSW 1029
MF+FNF NAA+ Q + A H A+ L+ D + T AG +A + T ++ + A + + SDL GVYEGG K+WE S+DL+EYL E H +A R +V+ELGCGHGLPGI AL+QG V FSD+NSEVI+ T+PN + V + A +YSGDW +S + + +DLILTAETLYT +V +LE I RHL G ALVA+K +YFGTGGS + + G + V ND +SNIRE+++V++
Sbjct: 1 MFRFNF--DNAAEAAQSAAAAPAPLAKRLAKRHNAQALE--VGDDYFLPVTIAGHALAIVNQSHPTFIQN---TGALQKLLSTSDLETGVYEGGFKLWECSVDLIEYL---------------EAH---------------------------------KEAFGIGTRSLRVMELGCGHGLPGIYALQQGAAHVLFSDYNSEVIDLATIPNAQ-RVASAHLNRATFYSGDWGHMSAAMTAANEDTEYDLILTAETLYTEEVTIALLETIKRHLKPSGVALVAAKTYYFGTGGSVHHLKSLIAATGTMVATTVWNGNDCRSNIREIVQVTY 274
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: A0A024UPA8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPA8_9STRA) HSP 1 Score: 164 bits (415), Expect = 8.380e-44 Identity = 118/334 (35.33%), Postives = 164/334 (49.10%), Query Frame = 1
Query: 46 MFKFNFYPSNAA---DEDQPTLCPDSGPKNVPASAHTARQ-LDPKASIDAEIAATAAGAQVAWRRGDSTLLRTVPTSRACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGF-QVCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSPLLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGH-ALVASKRFYFGTGGSTQYFREQATLDGRLACVDVSILNDGKSNIREVLRVSW 1029
MF+FNF AA + P+ + PK PA H A +P A+ E G ++ + R + + ++ SD+ GVYEGG K+WE ++DL++YL A+ A + +H NG +VLELGCGHGLPG+ AL+QG V FSD+N EVIE T+PN++ N A +YSGDW +S + FDLILTAET+YT V+ ++ + I RHL R G ALVA+K +YFGTGGS +F+ DG + V ND KSN+RE++ VS+
Sbjct: 2 MFRFNFDEDGAAAALTNETPSNQSSAAPKR-PARRHVAAPPTEPPAAN--EFIVVPVGPVLSMAIVNQHHPRFLSRTGELASLLTTSDIQTGVYEGGFKLWECAVDLIQYLAAN--------APNLPVH-------------------------------NGW----------RVLELGCGHGLPGLHALQQGAAHVTFSDYNHEVIELATIPNLQRNANANDLTKATFYSGDWQLMSEDMLAHGTDMEFDLILTAETIYTESVSVELFQTIQRHLKRRGGIALVAAKSYYFGTGGSVHHFKSLVAQDGTMVARTVWESNDAKSNVREIVHVSY 283
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: A0A485L4J9_9STRA (Aste57867_15473 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4J9_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.810e-42 Identity = 105/262 (40.08%), Postives = 139/262 (53.05%), Query Frame = 1
Query: 280 IPNESDLVQGVYEGGLKVWEASLDLVEYLF--ASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGF-QVCFSDFNSEVIEQVTVPNVRLNVRDRFWDL-AEYYSGDWNSLSPLLDERDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHALVASKRFYFGTGGSTQYFREQA----TLDGRLACVDVSIL--NDGKSNIREVLRVSWME 1035
I SD+ GVYEGG K+WE ++DL++YL ASS A ++D R V+ELGCGHGLPGI AL QG +V FSD+N EVIE T+PNV N A YYSGDW +S L+ + FDLILTAET+YT VA + + I+RHL R G ALVA+K +YFGTGGS +F++ + DGR V ++ ND +SN+RE++RV++ +
Sbjct: 80 ILTTSDIQTGVYEGGFKLWEGAVDLIQYLMRHASSFPMAS-----------------------QADYR--------------------------VMELGCGHGLPGIYALLQGAAEVYFSDYNKEVIELATIPNVLRNASPIVAAAKARYYSGDWQLVSDLMHTQGVPPLFDLILTAETIYTESVAITLAQTIVRHLKRGGVALVAAKTYYFGTGGSVHHFKQLIDDVRSTDGRRLLVAETVWDSNDARSNMREIVRVTYAD 292
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: G5A449_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A449_PHYSP) HSP 1 Score: 159 bits (403), Expect = 6.290e-42 Identity = 115/340 (33.82%), Postives = 165/340 (48.53%), Query Frame = 1
Query: 49 FKFNFYPSNAADEDQPT-LCPDSGPKNVPASAHTARQLDPKASIDAE-----IAATAAGAQVAWRRGDSTLLRTVPTSRACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGFQ-VCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSPLLDE----RDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHA--LVASKRFYFGTGGSTQYFREQATLDGRLACVDVSILNDGKSNIREVLRVSW 1029
F FNF A E P L P + AS A +A G +++ ++T + + A +I + SD+ GVYEGG K+WE ++DLV + VE + + + P + VLELGCGHGLPGI AL++G Q V FSD+N EV+E T PNVR NV D+ + AE+Y+G W+S++ + + + +FDLILTAET+YT VA ++ + I RHL R HA LVA+K++YFGT GS Q+F DG L V + +SNIRE++++S+
Sbjct: 3 FSFNFALDGATAEASPAPLAPSPASSGASVPTRNGERFVHSASSSASASPAAFSAVQVGGDLSFDIVNTTDAGFLARTGAISSILSTSDVQTGVYEGGFKLWECAVDLVRF---------------------------VEAQLRQDGAQMPPA----------------------VLELGCGHGLPGIHALQRGAQRVVFSDYNKEVLELTTSPNVRRNVSDQLYSKAEFYAGAWSSMTEYMRDVEHLSEDQMQFDLILTAETIYTEAVAVELYQTIKRHLRRVPHARALVAAKKYYFGTNGSVQHFVGLVQADGVLRAETVWEERNCRSNIREIVQLSY 293
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Match: A0A6A4FT14_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FT14_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.330e-41 Identity = 100/261 (38.31%), Postives = 141/261 (54.02%), Query Frame = 1
Query: 268 ACPAIPNESDLVQGVYEGGLKVWEASLDLVEYLFASSIGKAKGLASDQEIHGTSSKTGGVELRCPRSDERAPTSPDLGRLRLNGTDASHFTRRRKQVLELGCGHGLPGIMALRQGFQ-VCFSDFNSEVIEQVTVPNVRLNVRDRFWDLAEYYSGDWNSLSPLLDE----RDGGGRFDLILTAETLYTTDVADKILEMILRHLGRDGHA--LVASKRFYFGTGGSTQYFREQATLDGRLACVDVSILNDGKSNIREVLRVSW 1029
A +I + SD+ GVYEGG K+WE ++DLV + VEL+ + + P++ VLELGCGHGL GI AL++G + V FSD+N EV+E T PNVR NV D+ + AE+Y+G W+S++ + + +FDLILTAET+YT VA ++ + I RHL R HA LVA+K++YFGT GS Q+F DG L V D +SNIRE++++S+
Sbjct: 79 AISSILSSSDVQTGVYEGGFKLWEGAVDLVRF---------------------------VELQLRQDGAQMPST----------------------VLELGCGHGLSGIHALQRGAERVVFSDYNKEVLELTTSPNVRRNVDDQLYGKAEFYAGAWSSMTDYMRNVEQLSEEQMQFDLILTAETIYTEAVAVELYQAIKRHLRRAPHARALVAAKKYYFGTNGSVQHFVGLVQADGVLRAETVWEERDCRSNIREIVQLSY 290 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8.19309.1 >prot_F-serratus_M_contig8.19309.1 ID=prot_F-serratus_M_contig8.19309.1|Name=mRNA_F-serratus_M_contig8.19309.1|organism=Fucus serratus male|type=polypeptide|length=340bp MFKFNFYPSNAADEDQPTLCPDSGPKNVPASAHTARQLDPKASIDAEIAAback to top mRNA from alignment at F-serratus_M_contig8:652679..656664- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8.19309.1 ID=mRNA_F-serratus_M_contig8.19309.1|Name=mRNA_F-serratus_M_contig8.19309.1|organism=Fucus serratus male|type=mRNA|length=3986bp|location=Sequence derived from alignment at F-serratus_M_contig8:652679..656664- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8:652679..656664- >mRNA_F-serratus_M_contig8.19309.1 ID=mRNA_F-serratus_M_contig8.19309.1|Name=mRNA_F-serratus_M_contig8.19309.1|organism=Fucus serratus male|type=CDS|length=2040bp|location=Sequence derived from alignment at F-serratus_M_contig8:652679..656664- (Fucus serratus male)back to top |