mRNA_F-serratus_M_contig796.19256.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig796.19256.1 vs. uniprot
Match: D8LEU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU5_ECTSI) HSP 1 Score: 230 bits (586), Expect = 8.050e-66 Identity = 150/323 (46.44%), Postives = 198/323 (61.30%), Query Frame = 3
Query: 1032 RATNSVIDGVVGHATASGQTVKPSPPTKNVLMYASDNDKAEAERLFARALAAAGGTVASETVLTGSSRALCSTNGSEETGKGG----GWFCEEESEMS----PTLAEVHFVVSGCSIK-----GARG-----GTGVGRRRVDLRTDGARRWHLQQAAKAHA-DTKVGLTARYILGQHALATGNDRKAEIELLGALDAEPSTYGACAAYLSVLRQVSVDSVKAKARLRRLRRRL---KTNKEPHGASSIPKEAIAVRLSKEMEFAHRSVKLLDRLKVYASLRKRYMGERLRGAGLTNPEWALALEDGWETQYTRALEAGDDWAA 1934
R+T V++ V A +G +V L + ++ DK EA RL ARA ++AGG + E+V G G E+ G E + +MS L +VH VVSG S++ GARG G G G + + DGA+ WHL++AA+ A +TK G+ ARYIL +H LA+G+D+KAE+ L A+DAEP+TYGACAA LSVLRQVSVD+ +A R RRL+R L + + G + K+ +A RL ++ E RSVKLL+RLKVYASLRKRY G+RLRG GL + EWA ALE+GWET+Y R LEAGD WAA
Sbjct: 33 RSTAPVLE--VAAAAPTGSSVPAGDEVLRPLTFPTEKDKNEAARLLARAFSSAGGAMPPESVYFGEQ-----AEGEPESNDDGIERARSSAETKKKMSGQGQTVLGDVHLVVSGFSLREARKSGARGHASSDGRGQGTQTQERGGDGAKEWHLREAARVSAPNTKTGILARYILARHTLASGDDKKAEVLFLAAIDAEPTTYGACAALLSVLRQVSVDAFRANVRSRRLKRWLGKRRKGRRVSGGGASQKKDVAARLWQQFEDEKRSVKLLERLKVYASLRKRYAGDRLRGPGLASFEWAQALEEGWETRYARLLEAGDGWAA 348 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig796.19256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig796.19256.1 >prot_F-serratus_M_contig796.19256.1 ID=prot_F-serratus_M_contig796.19256.1|Name=mRNA_F-serratus_M_contig796.19256.1|organism=Fucus serratus male|type=polypeptide|length=604bp MFVKITKRYPQDPMAHTALGYYLLSRDNGYLTVDLLERALSAFRAAKSISback to top mRNA from alignment at F-serratus_M_contig796:168620..186537+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig796.19256.1 ID=mRNA_F-serratus_M_contig796.19256.1|Name=mRNA_F-serratus_M_contig796.19256.1|organism=Fucus serratus male|type=mRNA|length=17918bp|location=Sequence derived from alignment at F-serratus_M_contig796:168620..186537+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig796:168620..186537+ >mRNA_F-serratus_M_contig796.19256.1 ID=mRNA_F-serratus_M_contig796.19256.1|Name=mRNA_F-serratus_M_contig796.19256.1|organism=Fucus serratus male|type=CDS|length=3624bp|location=Sequence derived from alignment at F-serratus_M_contig796:168620..186537+ (Fucus serratus male)back to top |