mRNA_F-serratus_M_contig796.19244.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig796.19244.1 vs. uniprot
Match: D8LEV6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEV6_ECTSI) HSP 1 Score: 264 bits (675), Expect = 1.210e-68 Identity = 588/1331 (44.18%), Postives = 668/1331 (50.19%), Query Frame = 2
Query: 212 MNRRQSQGVPKGGYGSLACPPIRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GSRGSSRRRGSNHSGSRPPPRGMPMVA---PHF--GKHGSG---------NGMMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--------------GKDYAAMASVAALPSA----REPFAPRSH-ALGGRG--YPPAGSLHANGPLNRSTPPA-GGGKDYASLADAGSSGSRLGVGXXXXXXXXXXXXXXXGSYADQARDVRHAGRMLGAAISG----GLVRGNSAXXXXXXXXXXXXR--GGKAPPSPPGRDQFGRERDWRGNAPNGRRAAAPASNGQPPVVHGSGFGTFSMASSMPMGSNSGASLQGPSAAAASKPKAST-ARDSRSP--ARGGALASASPSSAPLTRAELVRQHSRREQWQRQQAGRPSTSPSSCPSLSSSSEDGRHRNPDEERKRQVQYNSTVGLHERHRNYSEHRDRNARSRGDYLYQQHXXXXXXXXXXXGVGEGKSRDRRDTV---------------------------------------------AAPA-----AHGIYGRSPRDRSPXXXXXXXXXXXXXXXXSRVLPSTPLRQGRVSGAGGGGGDLDPRELPKEGDDPGGAVAGGSGKSPARQGTTNG----------------------------------------SRAANGRFPVEREGNRSRVTPRLGGGARGQGQGQGRYATGNVLSPNEDAEHSCGEAE-----GSYDEGEVSAGGGR-EWQRRREREEDARD-WKRDAYW-GGVSDPHR-------RPPGCSNGG--------------GMLGSRGLVRERDRADSPRDRGRYNPTPPQPPPMAAGMEDEQESSSLSAGIRRVSLGFNQGAR---GDRQEREDLSINRGVAGEGEAGGG---------YKRPRSPEXXXXXXXXXXXXXXXNRHQDLRSQDSRGAGGNHPDFNSSRPANHAPNRHDRDERSSPPAD--SRHAAE---------RMHQPRHKPPPLQAAAPNAPLGKVQHHQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSKARVSPAPT-----AGHGNLNRGSPLARRGSPLQPGHVARSQGSPXXXXXXXXXXXXXXXXXX----------------PLSTQGA--------------VADARDGVTVAGTAGVNESNG-------------WTPGRRVRGPVITDRLVSLKAEFLELHDMLLESDFQWEQSQKFCEMLKVQLDQLMLAPHRNRDPLAQP 3487
MNRRQSQGVPKGGYGSLAC P RRR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSRGSSRRRGS HS SR RG VA HF GKHG G +MG XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX GKDYA+MAS+++ PS F R+ ++ GRG SLHANG + R P A GKDYASLA G G G XXXXXXXXXXX YADQARDVR+AGR LGAAISG L RGN XXXXXXXXXXXX KAPPSPPGRDQFGRERDWR +A NGRR A NGQPPVVHGSGFGTFSMA +G++SG G + + S +ST RDSRSP +RGG P++AP TRA+LVR HS R++ ++ Q G +S +DGR +Q Q N+ + +R R E RD+ D+ XXXXXXXXXXX AAP+ A G S +SP + TPL R S G +AGGSG GT G RA NG P ERE +R R PRL G G+G +L+ NE A G++E GS G S+GG R +ER+ D R+ WKRD Y GG D HR R G GG + G RG+VRERDR DSPRDRGRYNPTPPQPPP+ + E S +LS RR SLG+ G GD Q+R + G+ GG YKRPRSPE R Q+ QD RG N+ D + RP D RS+PP D SR+A E HQ + PL N P G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+G R + P G G + RGSPL G V + XXXXXXXXXXXXXXXXXX PLS A V+ + G G+A + + R PVITDRL+SLKAEFLELHDML+ESDFQWE+SQ+FCE+LK+QLDQLML PHR+R+ +A P
Sbjct: 1 MNRRQSQGVPKGGYGSLACAPTRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRGSSRRRGSTHSSSRHT-RGAGGVAFGGTHFVGGKHGGGLXXXXXXXXXXLMGMXXXXXXXXXXXXXXXMGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKDYASMASMSS-PSGGGVNNNAFPLRNPGSVPGRGRFMSSPSSLHANGAVARPMPAAVSAGKDYASLASGLPPGGS-GRGSVAGXXXXXXXXXXXXGYADQARDVRNAGRALGAAISGRRADSLSRGNXXXXXXXXXXXXXXXXXSSKAPPSPPGRDQFGRERDWRSSASNGRRQGASPPNGQPPVVHGSGFGTFSMA----LGNSSGEGATGVAPSKLSSRSSSTPGRDSRSPVGSRGGXXXXXXPTAAPPTRADLVRAHSSRQRQRQLQEG-------------ASLQDGR---------KQKQVNN---VDQRQRLSPERRDQAENHASDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPSTAFASAPGKKTSSDGSKSPHPAGPSTAVAAPVQENNGA--PTPLSPSRHSSNGXXXXXXXXXXK----------MAGGSGL-----GTLAGLTPTMDRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVNGGPPAERESDRPRPHPRL-------GLGEG------LLARNEPA---GGDSEVSTQGGSNQNGRESSGGRRPSVVDLQERDADGRNAWKRDGYRAGGPGDSHRPSMGGGDRGVGGDRGGPYRGNGHXXXXXXXSLPGGRGVVRERDRPDSPRDRGRYNPTPPQPPPLMSSAEHSHGSGTLSVSARRASLGYPLGGGRNGGDWQDRNAGGM------PGQMGGXXXXXXXXXXYKRPRSPEPVAMDLEEDSPSPPRGRGQEFLKQDFRG--NNYADSRNHRPG--------WDGRSTPPGDPSSRYAMEGGGSGGGNHARHQHQQGMHPLA----NGP-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGRLGRTTGHPPMHPERGGVGPRLGPNAHQNRGSPLVGGSVGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSPLSMHSASPLALGPHGSRSSPVSGQKGGEEGRGSAAAGDGDSVAXXXXXXXXXXXXXXXXXXRPPVITDRLISLKAEFLELHDMLMESDFQWEESQRFCEVLKLQLDQLMLVPHRHRESMASP 1245 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig796.19244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig796.19244.1 >prot_F-serratus_M_contig796.19244.1 ID=prot_F-serratus_M_contig796.19244.1|Name=mRNA_F-serratus_M_contig796.19244.1|organism=Fucus serratus male|type=polypeptide|length=1096bp MNRRQSQGVPKGGYGSLACPPIRRRSRSKSRSLRTSPSSGSGRSKSRSTRback to top mRNA from alignment at F-serratus_M_contig796:30565..43950- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig796.19244.1 ID=mRNA_F-serratus_M_contig796.19244.1|Name=mRNA_F-serratus_M_contig796.19244.1|organism=Fucus serratus male|type=mRNA|length=13386bp|location=Sequence derived from alignment at F-serratus_M_contig796:30565..43950- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig796:30565..43950- >mRNA_F-serratus_M_contig796.19244.1 ID=mRNA_F-serratus_M_contig796.19244.1|Name=mRNA_F-serratus_M_contig796.19244.1|organism=Fucus serratus male|type=CDS|length=6576bp|location=Sequence derived from alignment at F-serratus_M_contig796:30565..43950- (Fucus serratus male)back to top |