mRNA_F-serratus_M_contig796.19242.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: D8LEW0_ECTSI (20S proteasome subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW0_ECTSI) HSP 1 Score: 369 bits (946), Expect = 3.260e-121 Identity = 211/369 (57.18%), Postives = 248/369 (67.21%), Query Frame = 1
Query: 10 MHATIVSLVISVGLQSSVASVYDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGV---GGEHRW-RQRTRR---EASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDAC-PRVFRSEPSGAFAEWTASAVGKGSDKALSKLEAVPELGALDWRDLAIEAVRATLASGGRECDVIVLRR-------------------ETEATEGDGQMVVATDRRWRRRGNAWMRRFSGSMAADGGILLEGSG 1035
M A I L + + + +A+VYDRAITVFSPDGKL+QVSYAEEAV++G L VAA NGR+AIA+CLERP D + ASE T V ++A + G +G G +H + R+R RR E + VG GI+D ANNQDRKLCE+DEGVYLAFAGISADGRVLASKIRLECQSYR+ MG P VG+IARYVGELQH+YTRTGGARP+GV+C+VAGFDED P VFRSEPSGA+AEWTASAVGK SDKAL +LEAVP+LGALDWR A AVRA LA G + CDV+VLRR E+E T G + W RG AW +RF GS+ DG +LLE G
Sbjct: 1 MRAPIAVLAVILAARPCMAAVYDRAITVFSPDGKLMQVSYAEEAVKQGSLGVAACNGRDAIAMCLERPAADGDITDPDATPSRASETT--------VATSAITDAGAGAAGDTARAGDDHVYSRRRNRRKHHEGGVRDPGVGVGIVDSANNQDRKLCEIDEGVYLAFAGISADGRVLASKIRLECQSYRYSMGAAPSVGYIARYVGELQHRYTRTGGARPYGVACLVAGFDEDTLLPSVFRSEPSGAYAEWTASAVGKASDKALGRLEAVPDLGALDWRGTAEAAVRAALAGGAKYCDVLVLRRVAGDDDVPAAAEAVATEPPESEFTAEGGGEARSARAGWSHRGGAWSKRFLGSIGGDGAVLLEEGG 361
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: A0A6H5K8Y9_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y9_9PHAE) HSP 1 Score: 362 bits (929), Expect = 1.680e-114 Identity = 207/367 (56.40%), Postives = 242/367 (65.94%), Query Frame = 1
Query: 10 MHATIVSLVISVGLQSSVASVYDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEH----RWRQRTRREASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDAC-PRVFRSEPSGAFAEWTASAVGKGSDKALSKLEAVPELGALDWRDLAIEAVRATLASGGRECDVIVLRRETEATEGDGQMVVAT--------------DRRWR------RRGNAWMRRFSGSMAADGGILLEGSG 1035
M A I L + + + +A+VYDRAITVFSPDGKL+QVSYAEEAV+RG LAVAA NGR+AIA+CLERP D + SE T V+ + A G+ + G G H R +R RRE + VG GI+D ANNQDRKLCE+DEGVYLAFAGISADGRVLASKIRLECQS+R+ MG P VG+IARYVG LQH+YTRTGGARP+GV+C+VAGFDED P VFRSEPSGA+AEW ASAVGK SDKAL KLE+VP+LGALDWR A AVRA LA G +ECDV+VLRR + + RW R G AW +RF GS+ DG +LLE G
Sbjct: 309 MRAPIAVLAVILAARPCIAAVYDRAITVFSPDGKLMQVSYAEEAVKRGSLAVAACNGRDAIAMCLERPEADGDVTDPDATPSRPSETTVATSVITDAGAGA---AGD--TAGAGDAHVYSRRRSRRKRREGGVRDPGVGVGIVDSANNQDRKLCEIDEGVYLAFAGISADGRVLASKIRLECQSFRYSMGAAPSVGYIARYVGGLQHRYTRTGGARPYGVACLVAGFDEDTLLPSVFRSEPSGAYAEWAASAVGKASDKALDKLESVPDLGALDWRGTAEAAVRAALAGGAKECDVLVLRRVADXXXXXXXXXXXXXXXXXXXXXXXXXGEVRWLKAGWSDRGGGAWSKRFFGSIGGDGAVLLEEGG 670
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: A0A835YTL9_9STRA (Proteasome subunit-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL9_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.820e-44 Identity = 89/169 (52.66%), Postives = 115/169 (68.05%), Query Frame = 1
Query: 415 SGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDAC-PRVFRSEPSGAFAEWTASAVGKG---SDKALSKLEAVP-ELGALDWRDLAIEAVRATL-ASGGRECDVIVLRRET 903
S + D +N RKL +VDE VY+ FAG++ADGRV+ KIR+ECQSYR G P + HIARY G+LQH+YT GG RPFGV+ ++AGFD D RVFR++PSGA EW A AVG G +D A+ +LEA +LG ++ LA A RA L A REC+V++L+R T
Sbjct: 5 SSLADTRSNLRRKLVQVDEEVYVTFAGLAADGRVMLDKIRVECQSYRLTFGEAPSLAHIARYAGDLQHRYTLQGGGRPFGVALIIAGFDADTGGARVFRTDPSGAVTEWRAVAVGGGKGVNDAAMKQLEAEGGKLGEMEGESLAEAAARAALQADAARECEVLLLQRRT 173
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: A0A2P2IA53_9CRUS (Proteasome subunit alpha type n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IA53_9CRUS) HSP 1 Score: 156 bits (394), Expect = 1.070e-40 Identity = 99/276 (35.87%), Postives = 141/276 (51.09%), Query Frame = 1
Query: 73 YDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEHRWRQRTRREASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDACPRVFRSEPSGAFAEWTASAVGKGSDKALSKLEAVPELGALDWRD--LAIEAVRATLASGGRECDVIVLR 894
YDRA+TVFSPDG L QV YA EAV +G AV GR + I +E+ +STA ++ +A TV RK+CEVD+ + LAFAG++AD RVL +K RLECQSYR + P VG+IA+Y+ +Q KYT+ GG RPFG++ ++ GF++D P ++++EPSGAF+EW ASA G+ LE + A D LA+ A+ + SG + ++ +L+
Sbjct: 4 YDRALTVFSPDGHLFQVEYATEAVNKGTTAVGV-RGRELLVIGVEK------------------------------KSTAKLQ---------------------DARTV----------------RKICEVDQHIVLAFAGLTADARVLVNKARLECQSYRLTVEDSPTVGYIAQYIARVQQKYTQRGGRRPFGIAGIIIGFNKDGSPALYQTEPSGAFSEWKASATGRNHKSVREFLEKHYDEEAKDDDQVKLAVRALMEVVESGAKNIEIAILK 211
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: A0A5F5XRW3_FELCA (Proteasome subunit alpha type-7 n=2 Tax=Felis catus TaxID=9685 RepID=A0A5F5XRW3_FELCA) HSP 1 Score: 157 bits (397), Expect = 7.240e-40 Identity = 101/284 (35.56%), Postives = 155/284 (54.58%), Query Frame = 1
Query: 73 YDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEHRWRQRTRREASTVNEVVGSGILDDANNQD----RKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDACPRVFRSEPSGAFAEWTASAVGKGSDKALSKLEAVPELGALDWRDLAIEAVRATLA----SGGRECDVIVLRRE 900
YDRAITVFSPDG L QV YA+EAV++G A A GR + + + + + AG + G A GT + + +TA + VG V V+G A QD RK+C +D+ V +AFAG++AD R++ ++ R+ECQS+R + P V +I RY+ L+ +YT++ G RPFG+S ++ GFD D PR+++++PSG + W A+A+G+G+ LE A++ DL I+ V L SGG+ ++ V+RR+
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAGCALFGRLSWSPGIVGVAEGSGAG---TRLGPADAGTAAQAGAGESGATALLPVGVRGKDIV-------------------VLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRD 264
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: A0A5J4ZA11_PORPP (Proteasome subunit alpha type n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZA11_PORPP) HSP 1 Score: 153 bits (387), Expect = 2.730e-39 Identity = 88/239 (36.82%), Postives = 126/239 (52.72%), Query Frame = 1
Query: 73 YDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEHRWRQRTRREASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDACPRVFRSEPSGAFAEWTASAVGKGSDKALSKLE 789
YDRAITVFSPDG L QV YA EAV++G AV G++ + +CLE+ +STA ++ EA TV RK+C +D+ + LAFAG++AD RVL +K R+ECQSYR + P V ++ RY+ +Q +YT++GG RPFG+S ++ GFD D PR+F+++PSG ++EW A+A+G+ S LE
Sbjct: 4 YDRAITVFSPDGHLFQVEYAMEAVRKGTTAVGV-RGKDVLVLCLEK------------------------------KSTAKLQ---------------------EARTV----------------RKICNLDQHIVLAFAGLTADARVLINKARVECQSYRLTVEDAPSVDYVTRYIAGVQQRYTQSGGVRPFGISSLIVGFDTDGSPRLFQTDPSGTYSEWKANAIGRNSKTVTEFLE 174
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: K3WH72_GLOUD (Proteasome subunit alpha type n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WH72_GLOUD) HSP 1 Score: 151 bits (382), Expect = 6.370e-39 Identity = 93/276 (33.70%), Postives = 137/276 (49.64%), Query Frame = 1
Query: 73 YDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEHRWRQRTRREASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDACPRVFRSEPSGAFAEWTASAVGKGSDKALSKLEA--VPELGALDWRDLAIEAVRATLASGGRECDVIVLR 894
YDRAITVFSPDG L QV YA EAV++G + V G+N++ + +ER K LQ + RK+C+VD+ + +AFAG++AD RVL +K RLECQSYR + P V ++ARYV +Q KYT+ GG RPFG+S ++AG D + P++++++PSG F+ W A+A G+ S LE +L D LAI+A+ + SG + ++ ++R
Sbjct: 4 YDRAITVFSPDGHLFQVEYAMEAVKKGAVVVGV-RGKNSVILAVER---------------------KEIAKLQDPRTV----------------------------------------------RKICKVDDHISIAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYVARIQQKYTQRGGVRPFGISMLIAGCDNNGVPQLYQTDPSGTFSAWKANATGRNSTNIREFLEKNYAEDLSEEDATRLAIKALLEIVESGSKNIEIAIVR 211
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: A0A7R8WDS4_9CRUS (Proteasome subunit alpha type n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WDS4_9CRUS) HSP 1 Score: 150 bits (380), Expect = 1.300e-38 Identity = 95/280 (33.93%), Postives = 142/280 (50.71%), Query Frame = 1
Query: 73 YDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEHRWRQRTRREASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDACPRVFRSEPSGAFAEWTASAVGKGSDKALSKLEA-VPELGALDWRD---LAIEAVRATLASGGRECDVIVLRRE 900
YDRAITVFSPDG L QV YA+EAV++G AV G N + + +E+ +S A ++ E T+ RK+C +DE V +AFAG++AD R+L ++ R+ECQSYR + P + +I RY+ L+ KYT++ G RPFG+SC++AGFD+D P ++++EPSG ++EW A+A G+ S LE E D + L I+A+ + SGG+ +V V+ R+
Sbjct: 6 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGV-RGLNTVVLGVEK------------------------------KSVAKLQ---------------------EERTI----------------RKICGLDEHVMMAFAGLTADARILVNRARVECQSYRLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIAGFDDDGTPHLYQTEPSGTYSEWKANATGRSSKTVREFLEKHYKEDDTSDTKKAVMLCIKALMEVVQSGGKNLEVAVMERK 217
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: A0A481T050_FOLCA (Proteasome subunit alpha type n=2 Tax=Isotomidae TaxID=36141 RepID=A0A481T050_FOLCA) HSP 1 Score: 150 bits (379), Expect = 1.770e-38 Identity = 93/283 (32.86%), Postives = 142/283 (50.18%), Query Frame = 1
Query: 64 ASVYDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEHRWRQRTRREASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDACPRVFRSEPSGAFAEWTASAVGKGSDKALSKLEAVPELGALDWRD----LAIEAVRATLASGGRECDVIVLRRE 900
AS YDRAITVFSPDG L QV YA+EAV++G AV G N + + +E+ +S A ++ E TV RK+C +D V +AFAG++AD R+L ++ R+ECQS+R + P + +I R++ EL+ +YT++ G RPFG+SC++ GFDED PR++++EPSG + EW A+A G+ + LE + LAI A+ + SGG+ ++ V+R++
Sbjct: 2 ASKYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGV-RGSNCVVLGVEK------------------------------KSVAKLQ---------------------EERTV----------------RKICLLDNHVVMAFAGLTADARILINRARVECQSHRLTVEDPVSLEYITRHIAELKQRYTQSNGRRPFGISCLIGGFDEDGTPRLYQTEPSGTYHEWKANATGRNAKTVREFLEKYYNADEASSEEKTVKLAIRALLEVVQSGGKNLEIAVMRKD 216
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Match: H3GBZ7_PHYRM (Proteasome subunit alpha type n=8 Tax=Peronosporaceae TaxID=4777 RepID=H3GBZ7_PHYRM) HSP 1 Score: 150 bits (378), Expect = 2.460e-38 Identity = 93/276 (33.70%), Postives = 142/276 (51.45%), Query Frame = 1
Query: 73 YDRAITVFSPDGKLIQVSYAEEAVQRGGLAVAASNGRNAIAICLERPPDDAQAGPDHSNNGAASEGTKHEDVLQQVESTADIEVGNEYSGGVGGEHRWRQRTRREASTVNEVVGSGILDDANNQDRKLCEVDEGVYLAFAGISADGRVLASKIRLECQSYRFGMGTPPGVGHIARYVGELQHKYTRTGGARPFGVSCVVAGFDEDACPRVFRSEPSGAFAEWTASAVGKGSDKALSKLEA--VPELGALDWRDLAIEAVRATLASGGRECDVIVLR 894
YDRAITVFSPDG L QV YA EAV++G + V G+N++ + +ER + TA ++ + TV RK+C+VD+ + +AFAG++AD RVL +K RLECQSYR + P V ++ARYV +Q KYT+ GG RPFG+S ++AG ++ P++++++PSG F+ W A+A G+ S LE V + + LAI+A+ + SG + +++V+R
Sbjct: 4 YDRAITVFSPDGHLFQVEYAMEAVKKGAVVVGV-RGKNSVVLAVER------------------------------KETAKLQ---------------------DPRTV----------------RKICKVDDHISIAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVARVQQKYTQRGGVRPFGISMLIAGCNDKGVPQLYQTDPSGTFSAWKANATGRNSTNIREFLEKNFVEDATEDEAVTLAIKALLEVVESGSKNIEIVVVR 211 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig796.19242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig796.19242.1 >prot_F-serratus_M_contig796.19242.1 ID=prot_F-serratus_M_contig796.19242.1|Name=mRNA_F-serratus_M_contig796.19242.1|organism=Fucus serratus male|type=polypeptide|length=357bp MHATIVSLVISVGLQSSVASVYDRAITVFSPDGKLIQVSYAEEAVQRGGLback to top mRNA from alignment at F-serratus_M_contig796:4075..8172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig796.19242.1 ID=mRNA_F-serratus_M_contig796.19242.1|Name=mRNA_F-serratus_M_contig796.19242.1|organism=Fucus serratus male|type=mRNA|length=4098bp|location=Sequence derived from alignment at F-serratus_M_contig796:4075..8172+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig796:4075..8172+ >mRNA_F-serratus_M_contig796.19242.1 ID=mRNA_F-serratus_M_contig796.19242.1|Name=mRNA_F-serratus_M_contig796.19242.1|organism=Fucus serratus male|type=CDS|length=2142bp|location=Sequence derived from alignment at F-serratus_M_contig796:4075..8172+ (Fucus serratus male)back to top |